RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 ATP10BO94823 1461 aa10.28□□□□□ -0.76
NFX1-202ENST00000379521 TEX14Q8IWB6 1497 aa10.28□□□□□ -0.76
NFX1-202ENST00000379521 MYO5CQ9NQX4 1742 aa10.27□□□□□ -0.76
NFX1-202ENST00000379521 CAMSAP2Q08AD1 1489 aa10.27□□□□□ -0.77
NFX1-202ENST00000379521 PZPP20742 1482 aa10.27□□□□□ -0.77
NFX1-202ENST00000379521 CCER1Q8TC90 406 aaPredicted RBP10.27□□□□□ -0.77
NFX1-202ENST00000379521 ABCC2Q92887 1545 aa10.27□□□□□ -0.77
NFX1-202ENST00000379521 ZCCHC11Q5TAX3 1644 aaKnown RBP10.26□□□□□ -0.77
NFX1-202ENST00000379521 ZNF316A6NFI3 1004 aaPredicted RBP10.26□□□□□ -0.77
NFX1-202ENST00000379521 PLB1Q6P1J6 1458 aa10.26□□□□□ -0.77
NFX1-202ENST00000379521 ABCA9Q8IUA7 1624 aa10.26□□□□□ -0.77
NFX1-202ENST00000379521 IQGAP3Q86VI3 1631 aa10.25□□□□□ -0.77
NFX1-202ENST00000379521 E9PCH4 1651 aa10.24□□□□□ -0.77
NFX1-202ENST00000379521 TTC37Q6PGP7 1564 aa10.24□□□□□ -0.77
NFX1-202ENST00000379521 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
NFX1-202ENST00000379521 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
NFX1-202ENST00000379521 VWDEQ8N2E2 1590 aa10.23□□□□□ -0.77
NFX1-202ENST00000379521 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
NFX1-202ENST00000379521 RPRD2Q5VT52 1461 aaKnown RBP10.22□□□□□ -0.77
NFX1-202ENST00000379521 ATP10AO60312 1499 aa10.21□□□□□ -0.78
NFX1-202ENST00000379521 NCOA1Q15788 1441 aa10.21□□□□□ -0.78
NFX1-202ENST00000379521 SPATA31E1Q6ZUB1 1445 aa10.21□□□□□ -0.78
NFX1-202ENST00000379521 APLP2Q06481 763 aa10.2□□□□□ -0.78
NFX1-202ENST00000379521 ARHGEF12Q9NZN5 1544 aa10.2□□□□□ -0.78
NFX1-202ENST00000379521 MTUS2Q5JR59 1369 aa10.19□□□□□ -0.78
NFX1-202ENST00000379521 INO80Q9ULG1 1556 aaPredicted RBP10.19□□□□□ -0.78
NFX1-202ENST00000379521 CARMIL2Q6F5E8 1435 aa10.19□□□□□ -0.78
NFX1-202ENST00000379521 RNF17Q9BXT8 1623 aaKnown RBP10.19□□□□□ -0.78
NFX1-202ENST00000379521 EIF2AK4Q9P2K8 1649 aaKnown RBP10.19□□□□□ -0.78
NFX1-202ENST00000379521 UHRF1BP1Q6BDS2 1440 aa10.18□□□□□ -0.78
NFX1-202ENST00000379521 WDR7Q9Y4E6 1490 aa10.18□□□□□ -0.78
NFX1-202ENST00000379521 ANKRD30BQ9BXX2 1392 aa10.18□□□□□ -0.78
NFX1-202ENST00000379521 ABCC1P33527 1531 aa10.17□□□□□ -0.78
NFX1-202ENST00000379521 KIAA1107Q9UPP5 1409 aa10.17□□□□□ -0.78
NFX1-202ENST00000379521 PRG4Q92954 1404 aaPredicted RBP10.17□□□□□ -0.78
NFX1-202ENST00000379521 IFT172Q9UG01 1749 aa10.17□□□□□ -0.78
NFX1-202ENST00000379521 KDM5CP41229 1560 aa10.16□□□□□ -0.78
NFX1-202ENST00000379521 HNRNPUL2Q1KMD3 747 aaKnown RBP10.15□□□□□ -0.78
NFX1-202ENST00000379521 TRPM1Q7Z4N2 1603 aa10.14□□□□□ -0.79
NFX1-202ENST00000379521 MROH1Q8NDA8 1641 aa10.14□□□□□ -0.79
NFX1-202ENST00000379521 CEP152O94986 1710 aa10.13□□□□□ -0.79
NFX1-202ENST00000379521 DIEXFQ68CQ4 756 aaKnown RBP10.13□□□□□ -0.79
NFX1-202ENST00000379521 KIAA1210Q9ULL0 1709 aa10.12□□□□□ -0.79
NFX1-202ENST00000379521 PPP1R15AO75807 674 aaPredicted RBP10.12□□□□□ -0.79
NFX1-202ENST00000379521 ZFYVE16Q7Z3T8 1539 aa10.09□□□□□ -0.79
NFX1-202ENST00000379521 SPHKAPQ2M3C7 1700 aa10.09□□□□□ -0.79
NFX1-202ENST00000379521 PRDM15P57071 1507 aaPredicted RBP10.09□□□□□ -0.79
NFX1-202ENST00000379521 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
NFX1-202ENST00000379521 CCDC141Q6ZP82 1450 aa10.08□□□□□ -0.8
NFX1-202ENST00000379521 PLEKHH2Q8IVE3 1493 aa10.08□□□□□ -0.8
NFX1-202ENST00000379521 IQGAP1P46940 1657 aa10.07□□□□□ -0.8
NFX1-202ENST00000379521 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
NFX1-202ENST00000379521 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
NFX1-202ENST00000379521 LMTK2Q8IWU2 1503 aa10.06□□□□□ -0.8
NFX1-202ENST00000379521 P3H3Q8IVL6 736 aa10.06□□□□□ -0.8
NFX1-202ENST00000379521 TET3O43151 1660 aa10.06□□□□□ -0.8
NFX1-202ENST00000379521 ERBINQ96RT1 1412 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 PLCH2O75038 1416 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 PLA2R1Q13018 1463 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 CFAP74Q9C0B2 1584 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 SYCP2Q9BX26 1530 aa10.05□□□□□ -0.8
NFX1-202ENST00000379521 SCAF1Q9H7N4 1312 aaKnown RBP10.05□□□□□ -0.8
NFX1-202ENST00000379521 C9orf84Q5VXU9 1444 aa10.04□□□□□ -0.8
NFX1-202ENST00000379521 KIDINS220Q9ULH0 1771 aa10.04□□□□□ -0.8
NFX1-202ENST00000379521 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
NFX1-202ENST00000379521 MAP3K4Q9Y6R4 1608 aa10.03□□□□□ -0.8
NFX1-202ENST00000379521 MADDQ8WXG6 1647 aa10.01□□□□□ -0.81
NFX1-202ENST00000379521 ZC3H13Q5T200 1668 aaKnown RBP10.01□□□□□ -0.81
NFX1-202ENST00000379521 TRPM2O94759 1503 aa10.01□□□□□ -0.81
NFX1-202ENST00000379521 PIK3C2BO00750 1634 aa10.01□□□□□ -0.81
NFX1-202ENST00000379521 GLI2P10070 1586 aa10.01□□□□□ -0.81
NFX1-202ENST00000379521 PTPRTO14522 1441 aa10.01□□□□□ -0.81
NFX1-202ENST00000379521 ZNF518AQ6AHZ1 1483 aa10□□□□□ -0.81
NFX1-202ENST00000379521 MIER1Q8N108 512 aa10□□□□□ -0.81
NFX1-202ENST00000379521 GPRASP1Q5JY77 1395 aa9.99□□□□□ -0.81
NFX1-202ENST00000379521 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
NFX1-202ENST00000379521 FRMPD1Q5SYB0 1578 aa9.99□□□□□ -0.81
NFX1-202ENST00000379521 TTBK1Q5TCY1 1321 aaPredicted RBP9.99□□□□□ -0.81
NFX1-202ENST00000379521 NRXN1Q9ULB1 1477 aa9.98□□□□□ -0.81
NFX1-202ENST00000379521 ZMYM4Q5VZL5 1548 aa9.98□□□□□ -0.81
NFX1-202ENST00000379521 ANKRD50Q9ULJ7 1429 aa9.98□□□□□ -0.81
NFX1-202ENST00000379521 PPRC1Q5VV67 1664 aaKnown RBP9.98□□□□□ -0.81
NFX1-202ENST00000379521 RANGAP1P46060 587 aaPredicted RBP9.97□□□□□ -0.81
NFX1-202ENST00000379521 MYOM1P52179 1685 aa9.97□□□□□ -0.81
NFX1-202ENST00000379521 REREQ9P2R6 1566 aa9.97□□□□□ -0.81
NFX1-202ENST00000379521 NEUROD1Q13562 356 aa9.96□□□□□ -0.81
NFX1-202ENST00000379521 RSPH4AQ5TD94 716 aa9.96□□□□□ -0.81
NFX1-202ENST00000379521 ZNF644Q9H582 1327 aaPredicted RBP9.96□□□□□ -0.81
NFX1-202ENST00000379521 CHMP7Q8WUX9 453 aaPredicted RBP9.96□□□□□ -0.81
NFX1-202ENST00000379521 MPHOSPH9Q99550 1183 aa9.96□□□□□ -0.81
NFX1-202ENST00000379521 ANKRD30AQ9BXX3 1397 aa9.96□□□□□ -0.81
NFX1-202ENST00000379521 SIN3AQ96ST3 1273 aa9.95□□□□□ -0.82
NFX1-202ENST00000379521 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
NFX1-202ENST00000379521 CLTCL1P53675 1640 aa9.94□□□□□ -0.82
NFX1-202ENST00000379521 CCER2I3L3R5 266 aa9.94□□□□□ -0.82
NFX1-202ENST00000379521 PPLO60437 1756 aa9.93□□□□□ -0.82
NFX1-202ENST00000379521 FAM50AQ14320 339 aaKnown RBP9.93□□□□□ -0.82
NFX1-202ENST00000379521 ARID4BQ4LE39 1312 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms