RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CHIC2Q9UKJ5 165 aa25.65■■□□□ 1.7
THUMPD2-201ENST00000378727 AKNAQ7Z591 1439 aa25.65■■□□□ 1.7
THUMPD2-201ENST00000378727 GCC2Q8IWJ2 1684 aa25.65■■□□□ 1.7
THUMPD2-201ENST00000378727 MAPKBP1O60336 1514 aa25.63■■□□□ 1.69
THUMPD2-201ENST00000378727 TTC37Q6PGP7 1564 aa25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 RRP7BPQ9NSQ0 103 aa25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 ZNF777Q9ULD5 760 aaPredicted RBP25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 CDC42BPBQ9Y5S2 1711 aa25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 PREX2Q70Z35 1606 aa25.61■■□□□ 1.69
THUMPD2-201ENST00000378727 ROCK1Q13464 1354 aa25.58■■□□□ 1.69
THUMPD2-201ENST00000378727 CROCC2H7BZ55 1655 aa25.57■■□□□ 1.68
THUMPD2-201ENST00000378727 KDM6BO15054 1643 aa25.55■■□□□ 1.68
THUMPD2-201ENST00000378727 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
THUMPD2-201ENST00000378727 SAMD9LQ8IVG5 1584 aa25.52■■□□□ 1.68
THUMPD2-201ENST00000378727 MYO5CQ9NQX4 1742 aa25.52■■□□□ 1.68
THUMPD2-201ENST00000378727 ADGBQ8N7X0 1667 aa25.5■■□□□ 1.67
THUMPD2-201ENST00000378727 ADGRL2O95490 1459 aa25.47■■□□□ 1.67
THUMPD2-201ENST00000378727 ARHGAP5Q13017 1502 aa25.47■■□□□ 1.67
THUMPD2-201ENST00000378727 ARHGEF5Q12774 1597 aa25.47■■□□□ 1.67
THUMPD2-201ENST00000378727 MBD5Q9P267 1494 aa25.46■■□□□ 1.67
THUMPD2-201ENST00000378727 WDR7Q9Y4E6 1490 aa25.46■■□□□ 1.67
THUMPD2-201ENST00000378727 NCOA1Q15788 1441 aa25.46■■□□□ 1.67
THUMPD2-201ENST00000378727 SHANK2Q9UPX8 1470 aa25.45■■□□□ 1.66
THUMPD2-201ENST00000378727 HNRNPMP52272 730 aaKnown RBP eCLIP25.43■■□□□ 1.66
THUMPD2-201ENST00000378727 PLCH2O75038 1416 aa25.42■■□□□ 1.66
THUMPD2-201ENST00000378727 C9orf84Q5VXU9 1444 aa25.4■■□□□ 1.66
THUMPD2-201ENST00000378727 ASXL2Q76L83 1435 aa25.39■■□□□ 1.65
THUMPD2-201ENST00000378727 SYCP2Q9BX26 1530 aa25.39■■□□□ 1.65
THUMPD2-201ENST00000378727 ANKRD30AQ9BXX3 1397 aa25.38■■□□□ 1.65
THUMPD2-201ENST00000378727 CCDC141Q6ZP82 1450 aa25.38■■□□□ 1.65
THUMPD2-201ENST00000378727 SIN3AQ96ST3 1273 aa25.36■■□□□ 1.65
THUMPD2-201ENST00000378727 DENND4BO75064 1496 aaPredicted RBP25.36■■□□□ 1.65
THUMPD2-201ENST00000378727 KIAA1107Q9UPP5 1409 aa25.34■■□□□ 1.65
THUMPD2-201ENST00000378727 ABCA9Q8IUA7 1624 aa25.34■■□□□ 1.65
THUMPD2-201ENST00000378727 PLEKHH2Q8IVE3 1493 aa25.34■■□□□ 1.65
THUMPD2-201ENST00000378727 TRIM52Q96A61 297 aa25.34■■□□□ 1.65
THUMPD2-201ENST00000378727 TSPY4P0CV99 314 aa25.33■■□□□ 1.65
THUMPD2-201ENST00000378727 TSPY10P0CW01 314 aa25.33■■□□□ 1.65
THUMPD2-201ENST00000378727 ARAP3Q8WWN8 1544 aa25.33■■□□□ 1.65
THUMPD2-201ENST00000378727 RSPH4AQ5TD94 716 aa25.33■■□□□ 1.65
THUMPD2-201ENST00000378727 ARHGEF12Q9NZN5 1544 aa25.32■■□□□ 1.64
THUMPD2-201ENST00000378727 NPM1P06748 294 aaKnown RBP eCLIP25.31■■□□□ 1.64
THUMPD2-201ENST00000378727 EFCAB2Q5VUJ9 269 aa25.31■■□□□ 1.64
THUMPD2-201ENST00000378727 ACIN1Q9UKV3 1341 aaKnown RBP25.3■■□□□ 1.64
THUMPD2-201ENST00000378727 MAST1Q9Y2H9 1570 aa25.29■■□□□ 1.64
THUMPD2-201ENST00000378727 ABCC1P33527 1531 aa25.29■■□□□ 1.64
THUMPD2-201ENST00000378727 NEUROD1Q13562 356 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 ANKRD50Q9ULJ7 1429 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 RIMBP3CA6NJZ7 1639 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 RIMBP3BA6NNM3 1639 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 RIMBP3Q9UFD9 1639 aa25.28■■□□□ 1.64
THUMPD2-201ENST00000378727 KIF15Q9NS87 1388 aa25.25■■□□□ 1.63
THUMPD2-201ENST00000378727 PZPP20742 1482 aa25.21■■□□□ 1.63
THUMPD2-201ENST00000378727 ZNF316A6NFI3 1004 aaPredicted RBP25.21■■□□□ 1.63
THUMPD2-201ENST00000378727 TIMELESSQ9UNS1 1208 aa25.21■■□□□ 1.63
THUMPD2-201ENST00000378727 FANCAO15360 1455 aa25.2■■□□□ 1.63
THUMPD2-201ENST00000378727 TRAPPC8Q9Y2L5 1435 aa25.2■■□□□ 1.62
THUMPD2-201ENST00000378727 PLXNC1O60486 1568 aa25.19■■□□□ 1.62
THUMPD2-201ENST00000378727 CYB5RLQ6IPT4 315 aa25.19■■□□□ 1.62
THUMPD2-201ENST00000378727 FOXD1Q16676 465 aa25.15■■□□□ 1.62
THUMPD2-201ENST00000378727 SLC4A1APQ9BWU0 796 aaKnown RBP25.15■■□□□ 1.62
THUMPD2-201ENST00000378727 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
THUMPD2-201ENST00000378727 ANKRD30BQ9BXX2 1392 aa25.12■■□□□ 1.61
THUMPD2-201ENST00000378727 TONSLQ96HA7 1378 aa25.1■■□□□ 1.61
THUMPD2-201ENST00000378727 ADGRL1O94910 1474 aa25.1■■□□□ 1.61
THUMPD2-201ENST00000378727 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
THUMPD2-201ENST00000378727 CD109Q6YHK3 1445 aa25.09■■□□□ 1.61
THUMPD2-201ENST00000378727 PPP1R15AO75807 674 aaPredicted RBP25.08■■□□□ 1.61
THUMPD2-201ENST00000378727 NUP155O75694 1391 aa25.08■■□□□ 1.61
THUMPD2-201ENST00000378727 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.6
THUMPD2-201ENST00000378727 ZFYVE16Q7Z3T8 1539 aa25.07■■□□□ 1.6
THUMPD2-201ENST00000378727 SCAPERQ9BY12 1400 aa25.06■■□□□ 1.6
THUMPD2-201ENST00000378727 RTEL1-TNFRSF6BF6WH68 1400 aa25.06■■□□□ 1.6
THUMPD2-201ENST00000378727 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
THUMPD2-201ENST00000378727 UNC13BO14795 1591 aa25.04■■□□□ 1.6
THUMPD2-201ENST00000378727 INO80Q9ULG1 1556 aaPredicted RBP25.03■■□□□ 1.6
THUMPD2-201ENST00000378727 PKD2Q13563 968 aa25.02■■□□□ 1.6
THUMPD2-201ENST00000378727 CFAP74Q9C0B2 1584 aa25.02■■□□□ 1.6
THUMPD2-201ENST00000378727 ERBINQ96RT1 1412 aa25.01■■□□□ 1.6
THUMPD2-201ENST00000378727 RPRD2Q5VT52 1461 aaKnown RBP25.01■■□□□ 1.59
THUMPD2-201ENST00000378727 ATP7AQ04656 1500 aa25■■□□□ 1.59
THUMPD2-201ENST00000378727 DIEXFQ68CQ4 756 aaKnown RBP25■■□□□ 1.59
THUMPD2-201ENST00000378727 FAM135AQ9P2D6 1515 aa24.99■■□□□ 1.59
THUMPD2-201ENST00000378727 MAP3K4Q9Y6R4 1608 aa24.97■■□□□ 1.59
THUMPD2-201ENST00000378727 GLI2P10070 1586 aa24.96■■□□□ 1.59
THUMPD2-201ENST00000378727 MAGI2Q86UL8 1455 aa24.95■■□□□ 1.59
THUMPD2-201ENST00000378727 ZNF518AQ6AHZ1 1483 aa24.94■■□□□ 1.58
THUMPD2-201ENST00000378727 IQGAP3Q86VI3 1631 aa24.93■■□□□ 1.58
THUMPD2-201ENST00000378727 KIDINS220Q9ULH0 1771 aa24.92■■□□□ 1.58
THUMPD2-201ENST00000378727 TEX14Q8IWB6 1497 aa24.92■■□□□ 1.58
THUMPD2-201ENST00000378727 NEO1Q92859 1461 aa24.92■■□□□ 1.58
THUMPD2-201ENST00000378727 POGZQ7Z3K3 1410 aa24.91■■□□□ 1.58
THUMPD2-201ENST00000378727 L3MBTL2Q969R5 705 aa24.9■■□□□ 1.58
THUMPD2-201ENST00000378727 KDM5CP41229 1560 aa24.9■■□□□ 1.58
THUMPD2-201ENST00000378727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.89■■□□□ 1.58
THUMPD2-201ENST00000378727 DIP2BQ9P265 1576 aa24.89■■□□□ 1.58
THUMPD2-201ENST00000378727 DEPDC5O75140 1603 aa24.85■■□□□ 1.57
THUMPD2-201ENST00000378727 MYT1LQ9UL68 1186 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms