RNA–Protein interactions for RNA: ENST00000378407.7

CCDC107-203, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 899 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-203ENST00000378407 ZFYVE16Q7Z3T8 1539 aa36.19■■■■□ 3.38
CCDC107-203ENST00000378407 ARHGAP5Q13017 1502 aa36.18■■■■□ 3.38
CCDC107-203ENST00000378407 POGZQ7Z3K3 1410 aa36.18■■■■□ 3.38
CCDC107-203ENST00000378407 FYCO1Q9BQS8 1478 aa36.18■■■■□ 3.38
CCDC107-203ENST00000378407 ADAMTSL3P82987 1691 aa36.15■■■■□ 3.38
CCDC107-203ENST00000378407 BCORL1Q5H9F3 1711 aa36.14■■■■□ 3.38
CCDC107-203ENST00000378407 MAGI2Q86UL8 1455 aa36.13■■■■□ 3.37
CCDC107-203ENST00000378407 YEATS2Q9ULM3 1422 aa36.1■■■■□ 3.37
CCDC107-203ENST00000378407 PTPRMP28827 1452 aa36.1■■■■□ 3.37
CCDC107-203ENST00000378407 MADDQ8WXG6 1647 aa36.08■■■■□ 3.37
CCDC107-203ENST00000378407 ZNF518AQ6AHZ1 1483 aa36.03■■■■□ 3.36
CCDC107-203ENST00000378407 PREX2Q70Z35 1606 aa36.01■■■■□ 3.35
CCDC107-203ENST00000378407 MYT1LQ9UL68 1186 aa35.99■■■■□ 3.35
CCDC107-203ENST00000378407 RIMS1Q86UR5 1692 aaKnown RBP35.97■■■■□ 3.35
CCDC107-203ENST00000378407 CDC42BPBQ9Y5S2 1711 aa35.96■■■■□ 3.35
CCDC107-203ENST00000378407 ATP10AO60312 1499 aa35.93■■■■□ 3.34
CCDC107-203ENST00000378407 C9orf84Q5VXU9 1444 aa35.93■■■■□ 3.34
CCDC107-203ENST00000378407 MLECQ14165 292 aa35.93■■■■□ 3.34
CCDC107-203ENST00000378407 SIGLEC1Q9BZZ2 1709 aa35.91■■■■□ 3.34
CCDC107-203ENST00000378407 AFAP1Q8N556 730 aa35.91■■■■□ 3.34
CCDC107-203ENST00000378407 KDM5CP41229 1560 aa35.9■■■■□ 3.34
CCDC107-203ENST00000378407 CEP162Q5TB80 1403 aa35.9■■■■□ 3.34
CCDC107-203ENST00000378407 ABCC1P33527 1531 aa35.89■■■■□ 3.34
CCDC107-203ENST00000378407 PLPPR3Q6T4P5 718 aa35.88■■■■□ 3.33
CCDC107-203ENST00000378407 CDC42BPAQ5VT25 1732 aa35.86■■■■□ 3.33
CCDC107-203ENST00000378407 MTUS2Q5JR59 1369 aa35.85■■■■□ 3.33
CCDC107-203ENST00000378407 ZNF777Q9ULD5 760 aaPredicted RBP35.83■■■■□ 3.33
CCDC107-203ENST00000378407 ITSN2Q9NZM3 1697 aa35.82■■■■□ 3.33
CCDC107-203ENST00000378407 FER1L4A9Z1Z3 1794 aa35.81■■■■□ 3.32
CCDC107-203ENST00000378407 TRAPPC8Q9Y2L5 1435 aa35.79■■■■□ 3.32
CCDC107-203ENST00000378407 ARHGEF12Q9NZN5 1544 aa35.78■■■■□ 3.32
CCDC107-203ENST00000378407 DIP2CQ9Y2E4 1556 aa35.78■■■■□ 3.32
CCDC107-203ENST00000378407 MLH3Q9UHC1 1453 aa35.77■■■■□ 3.32
CCDC107-203ENST00000378407 GPATCH8Q9UKJ3 1502 aaKnown RBP35.76■■■■□ 3.31
CCDC107-203ENST00000378407 CCNB3Q8WWL7 1395 aa35.76■■■■□ 3.31
CCDC107-203ENST00000378407 ABCA6Q8N139 1617 aa35.74■■■■□ 3.31
CCDC107-203ENST00000378407 SAMD9LQ8IVG5 1584 aa35.72■■■■□ 3.31
CCDC107-203ENST00000378407 SYCP2Q9BX26 1530 aa35.72■■■■□ 3.31
CCDC107-203ENST00000378407 CFDP1Q9UEE9 299 aaPredicted RBP35.71■■■■□ 3.31
CCDC107-203ENST00000378407 LMTK3Q96Q04 1460 aa35.71■■■■□ 3.31
CCDC107-203ENST00000378407 EHBP1L1Q8N3D4 1523 aa35.71■■■■□ 3.31
CCDC107-203ENST00000378407 REREQ9P2R6 1566 aa35.69■■■■□ 3.3
CCDC107-203ENST00000378407 PLEKHH2Q8IVE3 1493 aa35.66■■■■□ 3.3
CCDC107-203ENST00000378407 HNRNPMP52272 730 aaKnown RBP eCLIP35.62■■■■□ 3.29
CCDC107-203ENST00000378407 KIDINS220Q9ULH0 1771 aa35.61■■■■□ 3.29
CCDC107-203ENST00000378407 SPAG9O60271 1321 aaKnown RBP35.61■■■■□ 3.29
CCDC107-203ENST00000378407 ESF1Q9H501 851 aaKnown RBP35.59■■■■□ 3.29
CCDC107-203ENST00000378407 TIAM1Q13009 1591 aa35.59■■■■□ 3.29
CCDC107-203ENST00000378407 KIAA1107Q9UPP5 1409 aa35.58■■■■□ 3.29
CCDC107-203ENST00000378407 LOC105371045A0A1W2PR82 267 aa35.58■■■■□ 3.29
CCDC107-203ENST00000378407 AGLP35573 1532 aa35.57■■■■□ 3.29
CCDC107-203ENST00000378407 ILDR1Q86SU0 546 aaPredicted RBP35.55■■■■□ 3.28
CCDC107-203ENST00000378407 HSPA2P54652 639 aa35.54■■■■□ 3.28
CCDC107-203ENST00000378407 ATP7AQ04656 1500 aa35.52■■■■□ 3.28
CCDC107-203ENST00000378407 CEBPAP49715 358 aaPredicted RBP35.52■■■■□ 3.28
CCDC107-203ENST00000378407 VPS8Q8N3P4 1428 aa35.49■■■■□ 3.27
CCDC107-203ENST00000378407 SUPT6HQ7KZ85 1726 aaKnown RBP35.49■■■■□ 3.27
CCDC107-203ENST00000378407 INO80Q9ULG1 1556 aaPredicted RBP35.47■■■■□ 3.27
CCDC107-203ENST00000378407 PREX1Q8TCU6 1659 aa35.46■■■■□ 3.27
CCDC107-203ENST00000378407 NCOA2Q15596 1464 aa35.45■■■■□ 3.27
CCDC107-203ENST00000378407 ZNF644Q9H582 1327 aaPredicted RBP35.44■■■■□ 3.26
CCDC107-203ENST00000378407 CNTLNQ9NXG0 1405 aa35.4■■■■□ 3.26
CCDC107-203ENST00000378407 A2MP01023 1474 aa35.4■■■■□ 3.26
CCDC107-203ENST00000378407 UHRF1BP1Q6BDS2 1440 aa35.4■■■■□ 3.26
CCDC107-203ENST00000378407 C3P01024 1663 aa35.38■■■■□ 3.25
CCDC107-203ENST00000378407 MBD5Q9P267 1494 aa35.35■■■■□ 3.25
CCDC107-203ENST00000378407 PLXNC1O60486 1568 aa35.34■■■■□ 3.25
CCDC107-203ENST00000378407 CAMSAP2Q08AD1 1489 aa35.34■■■■□ 3.25
CCDC107-203ENST00000378407 LRRC9Q6ZRR7 1453 aa35.33■■■■□ 3.25
CCDC107-203ENST00000378407 ADGBQ8N7X0 1667 aa35.32■■■■□ 3.24
CCDC107-203ENST00000378407 CCDC141Q6ZP82 1450 aa35.3■■■■□ 3.24
CCDC107-203ENST00000378407 RTEL1-TNFRSF6BF6WH68 1400 aa35.26■■■■□ 3.24
CCDC107-203ENST00000378407 MROH2AA6NES4 1674 aa35.26■■■■□ 3.23
CCDC107-203ENST00000378407 GGT6Q6P531 493 aa35.25■■■■□ 3.23
CCDC107-203ENST00000378407 MAP3K1Q13233 1512 aa35.22■■■■□ 3.23
CCDC107-203ENST00000378407 CLTCQ00610 1675 aaKnown RBP35.21■■■■□ 3.23
CCDC107-203ENST00000378407 RSPH4AQ5TD94 716 aa35.2■■■■□ 3.23
CCDC107-203ENST00000378407 ZMYM3Q14202 1370 aa35.2■■■■□ 3.23
CCDC107-203ENST00000378407 SETD1BQ9UPS6 1966 aaKnown RBP35.2■■■■□ 3.22
CCDC107-203ENST00000378407 FBXO41Q8TF61 875 aa35.19■■■■□ 3.22
CCDC107-203ENST00000378407 NPATQ14207 1427 aa35.17■■■■□ 3.22
CCDC107-203ENST00000378407 APLP2Q06481 763 aa35.17■■■■□ 3.22
CCDC107-203ENST00000378407 KANK4Q5T7N3 995 aaPredicted RBP35.16■■■■□ 3.22
CCDC107-203ENST00000378407 DHX29Q7Z478 1369 aaKnown RBP35.15■■■■□ 3.22
CCDC107-203ENST00000378407 ARHGEF5Q12774 1597 aa35.15■■■■□ 3.22
CCDC107-203ENST00000378407 TSPY4P0CV99 314 aa35.14■■■■□ 3.22
CCDC107-203ENST00000378407 TSPY10P0CW01 314 aa35.14■■■■□ 3.22
CCDC107-203ENST00000378407 DMRT2Q9Y5R5 561 aa35.13■■■■□ 3.21
CCDC107-203ENST00000378407 PPP6R1Q9UPN7 881 aa35.1■■■■□ 3.21
CCDC107-203ENST00000378407 MYOM3Q5VTT5 1437 aa35.09■■■■□ 3.21
CCDC107-203ENST00000378407 KIF3BO15066 747 aa35.08■■■■□ 3.21
CCDC107-203ENST00000378407 STRCQ7RTU9 1775 aa35.08■■■■□ 3.21
CCDC107-203ENST00000378407 MIA2Q96PC5 1412 aa35.05■■■■□ 3.2
CCDC107-203ENST00000378407 PTPRKQ15262 1439 aa35.02■■■■□ 3.2
CCDC107-203ENST00000378407 MYO3AQ8NEV4 1616 aa35.02■■■■□ 3.2
CCDC107-203ENST00000378407 CERKQ8TCT0 537 aa34.99■■■■□ 3.19
CCDC107-203ENST00000378407 KDM5DQ9BY66 1539 aa34.99■■■■□ 3.19
CCDC107-203ENST00000378407 NCOA1Q15788 1441 aa34.98■■■■□ 3.19
CCDC107-203ENST00000378407 CAMSAP1Q5T5Y3 1602 aa34.98■■■■□ 3.19
CCDC107-203ENST00000378407 MAST1Q9Y2H9 1570 aa34.97■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms