RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 TIMELESSQ9UNS1 1208 aa24.19■■□□□ 1.46
TBC1D4-201ENST00000377625 HDGFL2Q7Z4V5 671 aaPredicted RBP24.18■■□□□ 1.46
TBC1D4-201ENST00000377625 SPRYD3Q8NCJ5 442 aa24.18■■□□□ 1.46
TBC1D4-201ENST00000377625 HSPA5P11021 654 aaKnown RBP24.17■■□□□ 1.46
TBC1D4-201ENST00000377625 CFAP44Q96MT7 982 aa24.16■■□□□ 1.46
TBC1D4-201ENST00000377625 ISY1Q9ULR0 285 aaKnown RBP24.16■■□□□ 1.46
TBC1D4-201ENST00000377625 APBB1O00213 710 aa24.15■■□□□ 1.46
TBC1D4-201ENST00000377625 PKD2Q13563 968 aa24.15■■□□□ 1.46
TBC1D4-201ENST00000377625 CUX2O14529 1486 aa24.14■■□□□ 1.46
TBC1D4-201ENST00000377625 KTN1Q86UP2 1357 aaKnown RBP24.14■■□□□ 1.46
TBC1D4-201ENST00000377625 NACADO15069 1562 aa24.14■■□□□ 1.46
TBC1D4-201ENST00000377625 IPO8O15397 1037 aaKnown RBP24.14■■□□□ 1.45
TBC1D4-201ENST00000377625 CCER2I3L3R5 266 aa24.13■■□□□ 1.45
TBC1D4-201ENST00000377625 CLSTN1O94985 981 aa24.13■■□□□ 1.45
TBC1D4-201ENST00000377625 CHAF1AQ13111 956 aaPredicted RBP24.12■■□□□ 1.45
TBC1D4-201ENST00000377625 PAK3O75914 559 aaPredicted RBP24.11■■□□□ 1.45
TBC1D4-201ENST00000377625 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
TBC1D4-201ENST00000377625 GNL2Q13823 731 aaKnown RBP24.1■■□□□ 1.45
TBC1D4-201ENST00000377625 DRC7Q8IY82 874 aa24.1■■□□□ 1.45
TBC1D4-201ENST00000377625 KIAA1211Q6ZU35 1233 aa24.09■■□□□ 1.45
TBC1D4-201ENST00000377625 U2AF1L5P0DN76 240 aaPredicted RBP24.08■■□□□ 1.45
TBC1D4-201ENST00000377625 U2AF1Q01081 240 aaKnown RBP eCLIP24.08■■□□□ 1.45
TBC1D4-201ENST00000377625 FOXD1Q16676 465 aa24.08■■□□□ 1.45
TBC1D4-201ENST00000377625 ARHGAP35Q9NRY4 1499 aa24.07■■□□□ 1.44
TBC1D4-201ENST00000377625 MSNP26038 577 aaKnown RBP24.07■■□□□ 1.44
TBC1D4-201ENST00000377625 CALD1Q05682 793 aaKnown RBP24.06■■□□□ 1.44
TBC1D4-201ENST00000377625 CSB-PGBD3P0DP91 1061 aa24.06■■□□□ 1.44
TBC1D4-201ENST00000377625 L1TD1Q5T7N2 865 aaKnown RBP24.06■■□□□ 1.44
TBC1D4-201ENST00000377625 ZNF330Q9Y3S2 320 aaPredicted RBP24.05■■□□□ 1.44
TBC1D4-201ENST00000377625 ITPRIPQ8IWB1 547 aa24.03■■□□□ 1.44
TBC1D4-201ENST00000377625 ROCK2O75116 1388 aaKnown RBP24.03■■□□□ 1.44
TBC1D4-201ENST00000377625 BAZ1AQ9NRL2 1556 aaPredicted RBP24.02■■□□□ 1.44
TBC1D4-201ENST00000377625 RWDD1Q9H446 243 aaPredicted RBP24■■□□□ 1.43
TBC1D4-201ENST00000377625 SOGA1O94964 1423 aa24■■□□□ 1.43
TBC1D4-201ENST00000377625 NCBP3Q53F19 620 aaKnown RBP23.99■■□□□ 1.43
TBC1D4-201ENST00000377625 RCAN3Q9UKA8 241 aa23.99■■□□□ 1.43
TBC1D4-201ENST00000377625 RALBP1Q15311 655 aa23.97■■□□□ 1.43
TBC1D4-201ENST00000377625 CARMIL2Q6F5E8 1435 aa23.97■■□□□ 1.43
TBC1D4-201ENST00000377625 NUP155O75694 1391 aa23.96■■□□□ 1.43
TBC1D4-201ENST00000377625 GBP4Q96PP9 640 aa23.95■■□□□ 1.42
TBC1D4-201ENST00000377625 MPHOSPH9Q99550 1183 aa23.95■■□□□ 1.42
TBC1D4-201ENST00000377625 STK31Q9BXU1 1019 aa23.94■■□□□ 1.42
TBC1D4-201ENST00000377625 EFCAB2Q5VUJ9 269 aa23.93■■□□□ 1.42
TBC1D4-201ENST00000377625 SPAG9O60271 1321 aaKnown RBP23.92■■□□□ 1.42
TBC1D4-201ENST00000377625 KANK4Q5T7N3 995 aaPredicted RBP23.92■■□□□ 1.42
TBC1D4-201ENST00000377625 CHMP4AQ9BY43 222 aa23.92■■□□□ 1.42
TBC1D4-201ENST00000377625 GORABQ5T7V8 394 aa23.91■■□□□ 1.42
TBC1D4-201ENST00000377625 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
TBC1D4-201ENST00000377625 RBM19Q9Y4C8 960 aaKnown RBP23.9■■□□□ 1.42
TBC1D4-201ENST00000377625 EIF3AQ14152 1382 aaKnown RBP23.9■■□□□ 1.42
TBC1D4-201ENST00000377625 PTMSP20962 102 aa23.89■■□□□ 1.41
TBC1D4-201ENST00000377625 ANKRD30AQ9BXX3 1397 aa23.89■■□□□ 1.41
TBC1D4-201ENST00000377625 HTATSF1O43719 755 aaKnown RBP23.89■■□□□ 1.41
TBC1D4-201ENST00000377625 CHMP3Q9Y3E7 222 aa23.89■■□□□ 1.41
TBC1D4-201ENST00000377625 DEKP35659 375 aaKnown RBP23.88■■□□□ 1.41
TBC1D4-201ENST00000377625 SLKQ9H2G2 1235 aaPredicted RBP23.87■■□□□ 1.41
TBC1D4-201ENST00000377625 SMC4Q9NTJ3 1288 aa23.87■■□□□ 1.41
TBC1D4-201ENST00000377625 TMX4Q9H1E5 349 aaPredicted RBP23.87■■□□□ 1.41
TBC1D4-201ENST00000377625 KIAA2012Q0VF49 1180 aa23.87■■□□□ 1.41
TBC1D4-201ENST00000377625 PMFBP1Q8TBY8 1022 aa23.87■■□□□ 1.41
TBC1D4-201ENST00000377625 TERF2IPQ9NYB0 399 aa23.86■■□□□ 1.41
TBC1D4-201ENST00000377625 CECR2Q9BXF3 1484 aa23.85■■□□□ 1.41
TBC1D4-201ENST00000377625 KIF3BO15066 747 aa23.85■■□□□ 1.41
TBC1D4-201ENST00000377625 TAF7LQ5H9L4 462 aa23.85■■□□□ 1.41
TBC1D4-201ENST00000377625 GPATCH3Q96I76 525 aa23.85■■□□□ 1.41
TBC1D4-201ENST00000377625 GZF1Q9H116 711 aaPredicted RBP23.85■■□□□ 1.41
TBC1D4-201ENST00000377625 CCDC9Q9Y3X0 531 aaKnown RBP23.84■■□□□ 1.41
TBC1D4-201ENST00000377625 TCERG1O14776 1098 aaKnown RBP23.84■■□□□ 1.41
TBC1D4-201ENST00000377625 RAB3GAP2Q9H2M9 1393 aa23.84■■□□□ 1.41
TBC1D4-201ENST00000377625 TRIM6-TRIM34B2RNG4 842 aa23.83■■□□□ 1.41
TBC1D4-201ENST00000377625 MFAP1P55081 439 aaKnown RBP23.83■■□□□ 1.41
TBC1D4-201ENST00000377625 HMMRO75330 724 aa23.83■■□□□ 1.4
TBC1D4-201ENST00000377625 HDAC5Q9UQL6 1122 aa23.82■■□□□ 1.4
TBC1D4-201ENST00000377625 SYAP1Q96A49 352 aaPredicted RBP23.81■■□□□ 1.4
TBC1D4-201ENST00000377625 SLC4A10Q6U841 1118 aa23.81■■□□□ 1.4
TBC1D4-201ENST00000377625 FMN1Q68DA7 1419 aa23.8■■□□□ 1.4
TBC1D4-201ENST00000377625 HSP90B1P14625 803 aaKnown RBP23.8■■□□□ 1.4
TBC1D4-201ENST00000377625 NGDNQ8NEJ9 315 aaKnown RBP23.79■■□□□ 1.4
TBC1D4-201ENST00000377625 NUTM2DQ5VT03 806 aaPredicted RBP23.79■■□□□ 1.4
TBC1D4-201ENST00000377625 CCDC146Q8IYE0 955 aa23.79■■□□□ 1.4
TBC1D4-201ENST00000377625 EID1Q9Y6B2 187 aa23.78■■□□□ 1.4
TBC1D4-201ENST00000377625 CLUAP1Q96AJ1 413 aa23.78■■□□□ 1.4
TBC1D4-201ENST00000377625 HNRNPMP52272 730 aaKnown RBP eCLIP23.76■■□□□ 1.398e-7■■■■□ 20.1
TBC1D4-201ENST00000377625 TPM4P67936 248 aa23.76■■□□□ 1.39
TBC1D4-201ENST00000377625 TDRD9Q8NDG6 1382 aaKnown RBP23.76■■□□□ 1.39
TBC1D4-201ENST00000377625 AMPHP49418 695 aa23.75■■□□□ 1.39
TBC1D4-201ENST00000377625 LMOD3Q0VAK6 560 aa23.74■■□□□ 1.39
TBC1D4-201ENST00000377625 CCDC34Q96HJ3 373 aa23.74■■□□□ 1.39
TBC1D4-201ENST00000377625 CENPJQ9HC77 1338 aaPredicted RBP23.73■■□□□ 1.39
TBC1D4-201ENST00000377625 WASHC2CQ9Y4E1 1318 aa23.73■■□□□ 1.39
TBC1D4-201ENST00000377625 NOC3LQ8WTT2 800 aaKnown RBP23.73■■□□□ 1.39
TBC1D4-201ENST00000377625 PDS5BQ9NTI5 1447 aa23.72■■□□□ 1.39
TBC1D4-201ENST00000377625 L3MBTL2Q969R5 705 aa23.72■■□□□ 1.39
TBC1D4-201ENST00000377625 LTV1Q96GA3 475 aaPredicted RBP23.72■■□□□ 1.39
TBC1D4-201ENST00000377625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.71■■□□□ 1.391e-6■■□□□ 11.8
TBC1D4-201ENST00000377625 NLRP13Q86W25 1043 aa23.71■■□□□ 1.39
TBC1D4-201ENST00000377625 NOL8Q76FK4 1167 aaKnown RBP23.7■■□□□ 1.39
TBC1D4-201ENST00000377625 G3V3G9 751 aa23.7■■□□□ 1.38
TBC1D4-201ENST00000377625 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
TBC1D4-201ENST00000377625 RASSF8Q8NHQ8 419 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms