RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 CROCC2H7BZ55 1655 aa25.47■■□□□ 1.67
NKX2-2-201ENST00000377142 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
NKX2-2-201ENST00000377142 CHIC2Q9UKJ5 165 aa25.46■■□□□ 1.67
NKX2-2-201ENST00000377142 ADGBQ8N7X0 1667 aa25.46■■□□□ 1.67
NKX2-2-201ENST00000377142 RRP7BPQ9NSQ0 103 aa25.46■■□□□ 1.67
NKX2-2-201ENST00000377142 TIMELESSQ9UNS1 1208 aa25.44■■□□□ 1.66
NKX2-2-201ENST00000377142 ZNF644Q9H582 1327 aaPredicted RBP25.44■■□□□ 1.66
NKX2-2-201ENST00000377142 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
NKX2-2-201ENST00000377142 KDM6BO15054 1643 aa25.43■■□□□ 1.66
NKX2-2-201ENST00000377142 SIN3AQ96ST3 1273 aa25.38■■□□□ 1.65
NKX2-2-201ENST00000377142 ADGRL2O95490 1459 aa25.37■■□□□ 1.65
NKX2-2-201ENST00000377142 PREX2Q70Z35 1606 aa25.37■■□□□ 1.65
NKX2-2-201ENST00000377142 UHRF1BP1LA0JNW5 1464 aa25.36■■□□□ 1.65
NKX2-2-201ENST00000377142 NEUROD1Q13562 356 aa25.34■■□□□ 1.65
NKX2-2-201ENST00000377142 SHANK2Q9UPX8 1470 aa25.34■■□□□ 1.65
NKX2-2-201ENST00000377142 CDC42BPBQ9Y5S2 1711 aa25.31■■□□□ 1.64
NKX2-2-201ENST00000377142 ZNF777Q9ULD5 760 aaPredicted RBP25.31■■□□□ 1.64
NKX2-2-201ENST00000377142 ZCCHC11Q5TAX3 1644 aaKnown RBP25.31■■□□□ 1.64
NKX2-2-201ENST00000377142 ARHGEF5Q12774 1597 aa25.3■■□□□ 1.64
NKX2-2-201ENST00000377142 NCOA1Q15788 1441 aa25.3■■□□□ 1.64
NKX2-2-201ENST00000377142 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
NKX2-2-201ENST00000377142 TRIM52Q96A61 297 aa25.27■■□□□ 1.64
NKX2-2-201ENST00000377142 KDM5BQ9UGL1 1544 aa25.27■■□□□ 1.64
NKX2-2-201ENST00000377142 TTC37Q6PGP7 1564 aa25.27■■□□□ 1.64
NKX2-2-201ENST00000377142 TONSLQ96HA7 1378 aa25.26■■□□□ 1.63
NKX2-2-201ENST00000377142 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.25■■□□□ 1.63
NKX2-2-201ENST00000377142 SAMD9LQ8IVG5 1584 aa25.25■■□□□ 1.63
NKX2-2-201ENST00000377142 ANKRD30AQ9BXX3 1397 aa25.25■■□□□ 1.63
NKX2-2-201ENST00000377142 MYO5CQ9NQX4 1742 aa25.25■■□□□ 1.63
NKX2-2-201ENST00000377142 C9orf84Q5VXU9 1444 aa25.22■■□□□ 1.63
NKX2-2-201ENST00000377142 MPHOSPH9Q99550 1183 aa25.21■■□□□ 1.63
NKX2-2-201ENST00000377142 PPP1R15AO75807 674 aaPredicted RBP25.19■■□□□ 1.62
NKX2-2-201ENST00000377142 MBD5Q9P267 1494 aa25.19■■□□□ 1.62
NKX2-2-201ENST00000377142 ARHGAP5Q13017 1502 aa25.18■■□□□ 1.62
NKX2-2-201ENST00000377142 CCDC141Q6ZP82 1450 aa25.18■■□□□ 1.62
NKX2-2-201ENST00000377142 ANKRD50Q9ULJ7 1429 aa25.14■■□□□ 1.61
NKX2-2-201ENST00000377142 PLEKHH2Q8IVE3 1493 aa25.13■■□□□ 1.61
NKX2-2-201ENST00000377142 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
NKX2-2-201ENST00000377142 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
NKX2-2-201ENST00000377142 RSPH4AQ5TD94 716 aa25.13■■□□□ 1.61
NKX2-2-201ENST00000377142 SYCP2Q9BX26 1530 aa25.12■■□□□ 1.61
NKX2-2-201ENST00000377142 MAST1Q9Y2H9 1570 aa25.12■■□□□ 1.61
NKX2-2-201ENST00000377142 PZPP20742 1482 aa25.12■■□□□ 1.61
NKX2-2-201ENST00000377142 HNRNPMP52272 730 aaKnown RBP eCLIP25.09■■□□□ 1.61
NKX2-2-201ENST00000377142 KIAA1107Q9UPP5 1409 aa25.09■■□□□ 1.61
NKX2-2-201ENST00000377142 ANKRD30BQ9BXX2 1392 aa25.08■■□□□ 1.6
NKX2-2-201ENST00000377142 SLC4A1APQ9BWU0 796 aaKnown RBP25.07■■□□□ 1.6
NKX2-2-201ENST00000377142 KDM5DQ9BY66 1539 aa25.06■■□□□ 1.6
NKX2-2-201ENST00000377142 PLCH2O75038 1416 aa25.06■■□□□ 1.6
NKX2-2-201ENST00000377142 KIF15Q9NS87 1388 aa25.06■■□□□ 1.6
NKX2-2-201ENST00000377142 ARAP3Q8WWN8 1544 aa25.05■■□□□ 1.6
NKX2-2-201ENST00000377142 RPRD2Q5VT52 1461 aaKnown RBP25.05■■□□□ 1.6
NKX2-2-201ENST00000377142 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
NKX2-2-201ENST00000377142 MIER1Q8N108 512 aa25.03■■□□□ 1.6
NKX2-2-201ENST00000377142 KCNH8Q96L42 1107 aa25.03■■□□□ 1.6
NKX2-2-201ENST00000377142 WDR7Q9Y4E6 1490 aa25.03■■□□□ 1.6
NKX2-2-201ENST00000377142 PLXNC1O60486 1568 aa25.03■■□□□ 1.6
NKX2-2-201ENST00000377142 ABCC1P33527 1531 aa25■■□□□ 1.59
NKX2-2-201ENST00000377142 FOXD1Q16676 465 aa25■■□□□ 1.59
NKX2-2-201ENST00000377142 EFCAB2Q5VUJ9 269 aa24.96■■□□□ 1.59
NKX2-2-201ENST00000377142 TEX14Q8IWB6 1497 aa24.96■■□□□ 1.59
NKX2-2-201ENST00000377142 ABCA9Q8IUA7 1624 aa24.95■■□□□ 1.59
NKX2-2-201ENST00000377142 ARHGEF12Q9NZN5 1544 aa24.95■■□□□ 1.58
NKX2-2-201ENST00000377142 NUP155O75694 1391 aa24.93■■□□□ 1.58
NKX2-2-201ENST00000377142 UNC13BO14795 1591 aa24.92■■□□□ 1.58
NKX2-2-201ENST00000377142 DUOX2Q9NRD8 1548 aa24.9■■□□□ 1.58
NKX2-2-201ENST00000377142 PKD2Q13563 968 aa24.89■■□□□ 1.58
NKX2-2-201ENST00000377142 L3MBTL2Q969R5 705 aa24.89■■□□□ 1.57
NKX2-2-201ENST00000377142 ASXL2Q76L83 1435 aa24.88■■□□□ 1.57
NKX2-2-201ENST00000377142 CENPBP07199 599 aaPredicted RBP24.87■■□□□ 1.57
NKX2-2-201ENST00000377142 FAM135AQ9P2D6 1515 aa24.86■■□□□ 1.57
NKX2-2-201ENST00000377142 ERBINQ96RT1 1412 aa24.84■■□□□ 1.57
NKX2-2-201ENST00000377142 TRAPPC8Q9Y2L5 1435 aa24.82■■□□□ 1.56
NKX2-2-201ENST00000377142 IQGAP3Q86VI3 1631 aa24.82■■□□□ 1.56
NKX2-2-201ENST00000377142 FANCAO15360 1455 aa24.81■■□□□ 1.56
NKX2-2-201ENST00000377142 RTEL1-TNFRSF6BF6WH68 1400 aa24.8■■□□□ 1.56
NKX2-2-201ENST00000377142 MAGI2Q86UL8 1455 aa24.8■■□□□ 1.56
NKX2-2-201ENST00000377142 ZFYVE16Q7Z3T8 1539 aa24.8■■□□□ 1.56
NKX2-2-201ENST00000377142 NPM1P06748 294 aaKnown RBP eCLIP24.77■■□□□ 1.56
NKX2-2-201ENST00000377142 HIRIP3Q9BW71 556 aaPredicted RBP24.76■■□□□ 1.55
NKX2-2-201ENST00000377142 INO80Q9ULG1 1556 aaPredicted RBP24.75■■□□□ 1.55
NKX2-2-201ENST00000377142 DDX10Q13206 875 aaKnown RBP24.74■■□□□ 1.55
NKX2-2-201ENST00000377142 SPAG9O60271 1321 aaKnown RBP24.73■■□□□ 1.55
NKX2-2-201ENST00000377142 ADGRL1O94910 1474 aa24.72■■□□□ 1.55
NKX2-2-201ENST00000377142 CFAP74Q9C0B2 1584 aa24.72■■□□□ 1.55
NKX2-2-201ENST00000377142 EIF4G2P78344 907 aaKnown RBP eCLIP24.72■■□□□ 1.55
NKX2-2-201ENST00000377142 ATP7AQ04656 1500 aa24.71■■□□□ 1.55
NKX2-2-201ENST00000377142 NBPF8Q3BBV2 869 aa24.7■■□□□ 1.54
NKX2-2-201ENST00000377142 HSPA5P11021 654 aaKnown RBP24.7■■□□□ 1.54
NKX2-2-201ENST00000377142 YTHDC1Q96MU7 727 aaKnown RBP24.69■■□□□ 1.54
NKX2-2-201ENST00000377142 UHRF1BP1Q6BDS2 1440 aa24.66■■□□□ 1.54
NKX2-2-201ENST00000377142 SCAPERQ9BY12 1400 aa24.66■■□□□ 1.54
NKX2-2-201ENST00000377142 DEPDC5O75140 1603 aa24.66■■□□□ 1.54
NKX2-2-201ENST00000377142 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
NKX2-2-201ENST00000377142 POLR1AO95602 1720 aaPredicted RBP24.63■■□□□ 1.53
NKX2-2-201ENST00000377142 EIF2AK4Q9P2K8 1649 aaKnown RBP24.63■■□□□ 1.53
NKX2-2-201ENST00000377142 CCDC144AA2RUR9 1427 aa24.63■■□□□ 1.53
NKX2-2-201ENST00000377142 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.62■■□□□ 1.53
NKX2-2-201ENST00000377142 ATP10AO60312 1499 aa24.61■■□□□ 1.53
NKX2-2-201ENST00000377142 CD109Q6YHK3 1445 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms