RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CHIC2Q9UKJ5 165 aa26.06■■□□□ 1.76
CTTN-203ENST00000376561 ABCC5O15440 1437 aa26.05■■□□□ 1.76
CTTN-203ENST00000376561 GCC2Q8IWJ2 1684 aa26.04■■□□□ 1.76
CTTN-203ENST00000376561 MAPKBP1O60336 1514 aa26.03■■□□□ 1.76
CTTN-203ENST00000376561 RRP7BPQ9NSQ0 103 aa26.02■■□□□ 1.76
CTTN-203ENST00000376561 ZNF777Q9ULD5 760 aaPredicted RBP26.02■■□□□ 1.76
CTTN-203ENST00000376561 ROCK1Q13464 1354 aa25.98■■□□□ 1.75
CTTN-203ENST00000376561 PREX2Q70Z35 1606 aa25.97■■□□□ 1.75
CTTN-203ENST00000376561 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.97■■□□□ 1.754e-6■■■□□ 15.9
CTTN-203ENST00000376561 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
CTTN-203ENST00000376561 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
CTTN-203ENST00000376561 CROCC2H7BZ55 1655 aa25.94■■□□□ 1.74
CTTN-203ENST00000376561 KDM6BO15054 1643 aa25.91■■□□□ 1.74
CTTN-203ENST00000376561 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
CTTN-203ENST00000376561 KCNH8Q96L42 1107 aa25.9■■□□□ 1.74
CTTN-203ENST00000376561 MYO5CQ9NQX4 1742 aa25.89■■□□□ 1.73
CTTN-203ENST00000376561 SAMD9LQ8IVG5 1584 aa25.88■■□□□ 1.73
CTTN-203ENST00000376561 ADGRL2O95490 1459 aa25.86■■□□□ 1.73
CTTN-203ENST00000376561 NCOA1Q15788 1441 aa25.85■■□□□ 1.73
CTTN-203ENST00000376561 ARHGEF5Q12774 1597 aa25.85■■□□□ 1.73
CTTN-203ENST00000376561 ARHGAP5Q13017 1502 aa25.85■■□□□ 1.73
CTTN-203ENST00000376561 SHANK2Q9UPX8 1470 aa25.84■■□□□ 1.73
CTTN-203ENST00000376561 MBD5Q9P267 1494 aa25.83■■□□□ 1.72
CTTN-203ENST00000376561 WDR7Q9Y4E6 1490 aa25.82■■□□□ 1.72
CTTN-203ENST00000376561 HNRNPMP52272 730 aaKnown RBP eCLIP25.8■■□□□ 1.725e-8■■■■■ 27.1
CTTN-203ENST00000376561 ANKRD30AQ9BXX3 1397 aa25.8■■□□□ 1.72
CTTN-203ENST00000376561 PLCH2O75038 1416 aa25.79■■□□□ 1.72
CTTN-203ENST00000376561 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
CTTN-203ENST00000376561 ACIN1Q9UKV3 1341 aaKnown RBP25.79■■□□□ 1.72
CTTN-203ENST00000376561 TRIM52Q96A61 297 aa25.78■■□□□ 1.72
CTTN-203ENST00000376561 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
CTTN-203ENST00000376561 CCDC141Q6ZP82 1450 aa25.77■■□□□ 1.72
CTTN-203ENST00000376561 TSPY4P0CV99 314 aa25.76■■□□□ 1.71
CTTN-203ENST00000376561 TSPY10P0CW01 314 aa25.76■■□□□ 1.71
CTTN-203ENST00000376561 RSPH4AQ5TD94 716 aa25.76■■□□□ 1.71
CTTN-203ENST00000376561 SYCP2Q9BX26 1530 aa25.76■■□□□ 1.71
CTTN-203ENST00000376561 PLEKHH2Q8IVE3 1493 aa25.74■■□□□ 1.71
CTTN-203ENST00000376561 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
CTTN-203ENST00000376561 KIAA1107Q9UPP5 1409 aa25.73■■□□□ 1.71
CTTN-203ENST00000376561 NEUROD1Q13562 356 aa25.72■■□□□ 1.71
CTTN-203ENST00000376561 DENND4BO75064 1496 aaPredicted RBP25.72■■□□□ 1.71
CTTN-203ENST00000376561 ARAP3Q8WWN8 1544 aa25.7■■□□□ 1.71
CTTN-203ENST00000376561 NPM1P06748 294 aaKnown RBP eCLIP25.7■■□□□ 1.7
CTTN-203ENST00000376561 EFCAB2Q5VUJ9 269 aa25.7■■□□□ 1.7
CTTN-203ENST00000376561 ZNF316A6NFI3 1004 aaPredicted RBP25.69■■□□□ 1.7
CTTN-203ENST00000376561 ABCA9Q8IUA7 1624 aa25.69■■□□□ 1.7
CTTN-203ENST00000376561 MPHOSPH9Q99550 1183 aa25.69■■□□□ 1.7
CTTN-203ENST00000376561 TIMELESSQ9UNS1 1208 aa25.68■■□□□ 1.7
CTTN-203ENST00000376561 ANKRD50Q9ULJ7 1429 aa25.68■■□□□ 1.7
CTTN-203ENST00000376561 MAST1Q9Y2H9 1570 aa25.66■■□□□ 1.7
CTTN-203ENST00000376561 ARHGEF12Q9NZN5 1544 aa25.66■■□□□ 1.7
CTTN-203ENST00000376561 ABCC1P33527 1531 aa25.65■■□□□ 1.7
CTTN-203ENST00000376561 KIF15Q9NS87 1388 aa25.64■■□□□ 1.69
CTTN-203ENST00000376561 PZPP20742 1482 aa25.59■■□□□ 1.69
CTTN-203ENST00000376561 SLC4A1APQ9BWU0 796 aaKnown RBP25.58■■□□□ 1.69
CTTN-203ENST00000376561 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
CTTN-203ENST00000376561 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
CTTN-203ENST00000376561 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
CTTN-203ENST00000376561 FANCAO15360 1455 aa25.57■■□□□ 1.68
CTTN-203ENST00000376561 PLXNC1O60486 1568 aa25.56■■□□□ 1.68
CTTN-203ENST00000376561 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
CTTN-203ENST00000376561 TRAPPC8Q9Y2L5 1435 aa25.55■■□□□ 1.68
CTTN-203ENST00000376561 FOXD1Q16676 465 aa25.54■■□□□ 1.68
CTTN-203ENST00000376561 ANKRD30BQ9BXX2 1392 aa25.52■■□□□ 1.68
CTTN-203ENST00000376561 PPP1R15AO75807 674 aaPredicted RBP25.51■■□□□ 1.67
CTTN-203ENST00000376561 CYB5RLQ6IPT4 315 aa25.51■■□□□ 1.67
CTTN-203ENST00000376561 KDM5DQ9BY66 1539 aa25.5■■□□□ 1.67
CTTN-203ENST00000376561 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
CTTN-203ENST00000376561 NUP155O75694 1391 aa25.48■■□□□ 1.67
CTTN-203ENST00000376561 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
CTTN-203ENST00000376561 DUOX2Q9NRD8 1548 aa25.46■■□□□ 1.67
CTTN-203ENST00000376561 AFAP1Q8N556 730 aa25.45■■□□□ 1.66
CTTN-203ENST00000376561 RTEL1-TNFRSF6BF6WH68 1400 aa25.45■■□□□ 1.66
CTTN-203ENST00000376561 CD109Q6YHK3 1445 aa25.45■■□□□ 1.66
CTTN-203ENST00000376561 SPAG9O60271 1321 aaKnown RBP25.43■■□□□ 1.66
CTTN-203ENST00000376561 SCAPERQ9BY12 1400 aa25.43■■□□□ 1.66
CTTN-203ENST00000376561 ZFYVE16Q7Z3T8 1539 aa25.42■■□□□ 1.66
CTTN-203ENST00000376561 RPRD2Q5VT52 1461 aaKnown RBP25.42■■□□□ 1.66
CTTN-203ENST00000376561 PKD2Q13563 968 aa25.42■■□□□ 1.66
CTTN-203ENST00000376561 UNC13BO14795 1591 aa25.41■■□□□ 1.66
CTTN-203ENST00000376561 ERBINQ96RT1 1412 aa25.41■■□□□ 1.66
CTTN-203ENST00000376561 CFAP74Q9C0B2 1584 aa25.4■■□□□ 1.66
CTTN-203ENST00000376561 INO80Q9ULG1 1556 aaPredicted RBP25.38■■□□□ 1.65
CTTN-203ENST00000376561 FAM135AQ9P2D6 1515 aa25.37■■□□□ 1.65
CTTN-203ENST00000376561 ATP7AQ04656 1500 aa25.36■■□□□ 1.65
CTTN-203ENST00000376561 L3MBTL2Q969R5 705 aa25.32■■□□□ 1.64
CTTN-203ENST00000376561 MAGI2Q86UL8 1455 aa25.32■■□□□ 1.64
CTTN-203ENST00000376561 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
CTTN-203ENST00000376561 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
CTTN-203ENST00000376561 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
CTTN-203ENST00000376561 MAP3K4Q9Y6R4 1608 aa25.29■■□□□ 1.64
CTTN-203ENST00000376561 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.28■■□□□ 1.641e-7■■■□□ 15.3
CTTN-203ENST00000376561 GLI2P10070 1586 aa25.28■■□□□ 1.64
CTTN-203ENST00000376561 NEO1Q92859 1461 aa25.28■■□□□ 1.64
CTTN-203ENST00000376561 KIDINS220Q9ULH0 1771 aa25.26■■□□□ 1.63
CTTN-203ENST00000376561 POGZQ7Z3K3 1410 aa25.26■■□□□ 1.63
CTTN-203ENST00000376561 MYT1LQ9UL68 1186 aa25.25■■□□□ 1.63
CTTN-203ENST00000376561 KDM5CP41229 1560 aa25.24■■□□□ 1.63
CTTN-203ENST00000376561 DEPDC5O75140 1603 aa25.21■■□□□ 1.63
CTTN-203ENST00000376561 DIP2BQ9P265 1576 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms