RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 ITSN2Q9NZM3 1697 aa15□□□□□ -0.01
ABCF1-202ENST00000376545 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
ABCF1-202ENST00000376545 TEX14Q8IWB6 1497 aa14.99□□□□□ -0.01
ABCF1-202ENST00000376545 WASHC2AQ641Q2 1341 aa14.99□□□□□ -0.01
ABCF1-202ENST00000376545 CROCC2H7BZ55 1655 aa14.98□□□□□ -0.01
ABCF1-202ENST00000376545 MAGI1Q96QZ7 1491 aaPredicted RBP14.98□□□□□ -0.01
ABCF1-202ENST00000376545 HSPA5P11021 654 aaKnown RBP14.97□□□□□ -0.01
ABCF1-202ENST00000376545 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
ABCF1-202ENST00000376545 NCOA1Q15788 1441 aa14.96□□□□□ -0.01
ABCF1-202ENST00000376545 TRIM52Q96A61 297 aa14.96□□□□□ -0.02
ABCF1-202ENST00000376545 TROQ12816 1431 aaPredicted RBP14.96□□□□□ -0.02
ABCF1-202ENST00000376545 ADGRL2O95490 1459 aa14.95□□□□□ -0.02
ABCF1-202ENST00000376545 L3MBTL2Q969R5 705 aa14.95□□□□□ -0.02
ABCF1-202ENST00000376545 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
ABCF1-202ENST00000376545 CNTLNQ9NXG0 1405 aa14.94□□□□□ -0.02
ABCF1-202ENST00000376545 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
ABCF1-202ENST00000376545 FKBP8Q14318 412 aa14.93□□□□□ -0.02
ABCF1-202ENST00000376545 PZPP20742 1482 aa14.93□□□□□ -0.02
ABCF1-202ENST00000376545 CAMSAP2Q08AD1 1489 aa14.93□□□□□ -0.02
ABCF1-202ENST00000376545 SYNJ2O15056 1496 aa14.93□□□□□ -0.02
ABCF1-202ENST00000376545 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
ABCF1-202ENST00000376545 KIF14Q15058 1648 aa14.91□□□□□ -0.02
ABCF1-202ENST00000376545 CDK11AQ9UQ88 783 aaPredicted RBP14.91□□□□□ -0.02
ABCF1-202ENST00000376545 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
ABCF1-202ENST00000376545 MBD5Q9P267 1494 aa14.91□□□□□ -0.02
ABCF1-202ENST00000376545 NUP160Q12769 1436 aa14.91□□□□□ -0.02
ABCF1-202ENST00000376545 PRG4Q92954 1404 aaPredicted RBP14.91□□□□□ -0.02
ABCF1-202ENST00000376545 BCL11AQ9H165 835 aa14.9□□□□□ -0.02
ABCF1-202ENST00000376545 CCDC7Q96M83 1385 aa14.89□□□□□ -0.03
ABCF1-202ENST00000376545 PLB1Q6P1J6 1458 aa14.89□□□□□ -0.03
ABCF1-202ENST00000376545 NBPF8Q3BBV2 869 aa14.88□□□□□ -0.03
ABCF1-202ENST00000376545 CDC42BPAQ5VT25 1732 aa14.88□□□□□ -0.03
ABCF1-202ENST00000376545 FOXD1Q16676 465 aa14.88□□□□□ -0.03
ABCF1-202ENST00000376545 ABCA8O94911 1581 aa14.87□□□□□ -0.03
ABCF1-202ENST00000376545 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
ABCF1-202ENST00000376545 C11orf95C9JLR9 678 aaPredicted RBP14.87□□□□□ -0.03
ABCF1-202ENST00000376545 ABCC10Q5T3U5 1492 aa14.84□□□□□ -0.03
ABCF1-202ENST00000376545 SHANK2Q9UPX8 1470 aa14.84□□□□□ -0.03
ABCF1-202ENST00000376545 NEFLP07196 543 aa14.84□□□□□ -0.03
ABCF1-202ENST00000376545 KIAA1107Q9UPP5 1409 aa14.84□□□□□ -0.03
ABCF1-202ENST00000376545 CARMIL2Q6F5E8 1435 aa14.83□□□□□ -0.04
ABCF1-202ENST00000376545 SLC4A1APQ9BWU0 796 aaKnown RBP14.83□□□□□ -0.04
ABCF1-202ENST00000376545 KDM5DQ9BY66 1539 aa14.83□□□□□ -0.04
ABCF1-202ENST00000376545 BCANQ96GW7 911 aa14.82□□□□□ -0.04
ABCF1-202ENST00000376545 PRKRIP1Q9H875 184 aaPredicted RBP14.82□□□□□ -0.04
ABCF1-202ENST00000376545 CFDP1Q9UEE9 299 aaPredicted RBP14.82□□□□□ -0.04
ABCF1-202ENST00000376545 PRKCSHP14314 528 aaPredicted RBP14.8□□□□□ -0.04
ABCF1-202ENST00000376545 KDM5CP41229 1560 aa14.8□□□□□ -0.04
ABCF1-202ENST00000376545 BCORL1Q5H9F3 1711 aa14.79□□□□□ -0.04
ABCF1-202ENST00000376545 KIF7Q2M1P5 1343 aa14.79□□□□□ -0.04
ABCF1-202ENST00000376545 UHRF1BP1Q6BDS2 1440 aa14.79□□□□□ -0.04
ABCF1-202ENST00000376545 HNRNPUQ00839 825 aaKnown RBP eCLIP14.79□□□□□ -0.04
ABCF1-202ENST00000376545 ANKRD30AQ9BXX3 1397 aa14.79□□□□□ -0.04
ABCF1-202ENST00000376545 ERCC6Q03468 1493 aa14.79□□□□□ -0.04
ABCF1-202ENST00000376545 CHMP7Q8WUX9 453 aaPredicted RBP14.79□□□□□ -0.04
ABCF1-202ENST00000376545 ATP10BO94823 1461 aa14.78□□□□□ -0.04
ABCF1-202ENST00000376545 ARHGEF5Q12774 1597 aa14.78□□□□□ -0.04
ABCF1-202ENST00000376545 CCDC184Q52MB2 194 aa14.78□□□□□ -0.04
ABCF1-202ENST00000376545 JPH4Q96JJ6 628 aa14.78□□□□□ -0.04
ABCF1-202ENST00000376545 ANKRD50Q9ULJ7 1429 aa14.77□□□□□ -0.05
ABCF1-202ENST00000376545 ERICH6BQ5W0A0 696 aa14.76□□□□□ -0.05
ABCF1-202ENST00000376545 ARHGEF12Q9NZN5 1544 aa14.76□□□□□ -0.05
ABCF1-202ENST00000376545 PTPRGP23470 1445 aa14.76□□□□□ -0.05
ABCF1-202ENST00000376545 DHX29Q7Z478 1369 aaKnown RBP14.75□□□□□ -0.05
ABCF1-202ENST00000376545 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
ABCF1-202ENST00000376545 RALGAPBQ86X10 1494 aa14.73□□□□□ -0.05
ABCF1-202ENST00000376545 C9orf84Q5VXU9 1444 aa14.73□□□□□ -0.05
ABCF1-202ENST00000376545 ZBED9Q6R2W3 1325 aa14.73□□□□□ -0.05
ABCF1-202ENST00000376545 CDC42BPBQ9Y5S2 1711 aa14.72□□□□□ -0.05
ABCF1-202ENST00000376545 PREX2Q70Z35 1606 aa14.71□□□□□ -0.05
ABCF1-202ENST00000376545 PKD2Q13563 968 aa14.71□□□□□ -0.05
ABCF1-202ENST00000376545 USP47Q96K76 1375 aa14.71□□□□□ -0.06
ABCF1-202ENST00000376545 PLEKHD1A6NEE1 506 aa14.7□□□□□ -0.06
ABCF1-202ENST00000376545 RBM19Q9Y4C8 960 aaKnown RBP14.7□□□□□ -0.06
ABCF1-202ENST00000376545 SAMD9LQ8IVG5 1584 aa14.69□□□□□ -0.06
ABCF1-202ENST00000376545 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
ABCF1-202ENST00000376545 MAST1Q9Y2H9 1570 aa14.67□□□□□ -0.06
ABCF1-202ENST00000376545 E9PCH4 1651 aa14.67□□□□□ -0.06
ABCF1-202ENST00000376545 ANP32EQ9BTT0 268 aa14.67□□□□□ -0.06
ABCF1-202ENST00000376545 ZNF777Q9ULD5 760 aaPredicted RBP14.67□□□□□ -0.06
ABCF1-202ENST00000376545 NUP155O75694 1391 aa14.66□□□□□ -0.06
ABCF1-202ENST00000376545 ROCK2O75116 1388 aaKnown RBP14.65□□□□□ -0.06
ABCF1-202ENST00000376545 SHROOM2Q13796 1616 aa14.65□□□□□ -0.06
ABCF1-202ENST00000376545 UNC13BO14795 1591 aa14.64□□□□□ -0.07
ABCF1-202ENST00000376545 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
ABCF1-202ENST00000376545 FBLN2P98095 1184 aa14.64□□□□□ -0.07
ABCF1-202ENST00000376545 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
ABCF1-202ENST00000376545 FAM9BQ8IZU0 186 aa14.63□□□□□ -0.07
ABCF1-202ENST00000376545 FAM135AQ9P2D6 1515 aa14.63□□□□□ -0.07
ABCF1-202ENST00000376545 TRPM1Q7Z4N2 1603 aa14.62□□□□□ -0.07
ABCF1-202ENST00000376545 PPP4R2Q9NY27 417 aa14.62□□□□□ -0.07
ABCF1-202ENST00000376545 SMG6Q86US8 1419 aaKnown RBP14.62□□□□□ -0.07
ABCF1-202ENST00000376545 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
ABCF1-202ENST00000376545 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
ABCF1-202ENST00000376545 RSPH4AQ5TD94 716 aa14.61□□□□□ -0.07
ABCF1-202ENST00000376545 LAMC1P11047 1609 aa14.6□□□□□ -0.07
ABCF1-202ENST00000376545 PLXNC1O60486 1568 aa14.6□□□□□ -0.07
ABCF1-202ENST00000376545 CHD1O14646 1710 aa14.6□□□□□ -0.07
ABCF1-202ENST00000376545 RNF123Q5XPI4 1314 aa14.59□□□□□ -0.07
ABCF1-202ENST00000376545 TTC37Q6PGP7 1564 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms