RNA–Protein interactions for RNA: ENST00000376094.8

TUBD1-204, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-204ENST00000376094 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
TUBD1-204ENST00000376094 TMEM121BQ9BXQ6 578 aaPredicted RBP10.55□□□□□ -0.72
TUBD1-204ENST00000376094 POTEJP0CG39 1038 aa10.53□□□□□ -0.72
TUBD1-204ENST00000376094 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.53□□□□□ -0.72
TUBD1-204ENST00000376094 FAM163AQ96GL9 167 aaPredicted RBP10.5□□□□□ -0.73
TUBD1-204ENST00000376094 SLAIN1Q8ND83 568 aa10.44□□□□□ -0.74
TUBD1-204ENST00000376094 TMC2Q8TDI7 906 aa10.44□□□□□ -0.74
TUBD1-204ENST00000376094 HAP1P54257 671 aaPredicted RBP10.43□□□□□ -0.74
TUBD1-204ENST00000376094 CDAN1Q8IWY9 1227 aa10.43□□□□□ -0.74
TUBD1-204ENST00000376094 TSHZ2Q9NRE2 1034 aa10.42□□□□□ -0.74
TUBD1-204ENST00000376094 PDE4AP27815 886 aa10.4□□□□□ -0.74
TUBD1-204ENST00000376094 TMEM92Q6UXU6 159 aa10.39□□□□□ -0.75
TUBD1-204ENST00000376094 CADPS2Q86UW7 1296 aa10.39□□□□□ -0.75
TUBD1-204ENST00000376094 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
TUBD1-204ENST00000376094 CRISPLD2Q9H0B8 497 aa10.38□□□□□ -0.75
TUBD1-204ENST00000376094 GPHNQ9NQX3 736 aaPredicted RBP10.38□□□□□ -0.75
TUBD1-204ENST00000376094 KIF3CO14782 793 aa10.36□□□□□ -0.75
TUBD1-204ENST00000376094 LARP6Q9BRS8 491 aaKnown RBP10.35□□□□□ -0.75
TUBD1-204ENST00000376094 NCKAP5LQ9HCH0 1330 aa10.34□□□□□ -0.75
TUBD1-204ENST00000376094 SNPHO15079 494 aa10.32□□□□□ -0.76
TUBD1-204ENST00000376094 FOXK1P85037 733 aa10.32□□□□□ -0.76
TUBD1-204ENST00000376094 WDR70Q9NW82 654 aa10.32□□□□□ -0.76
TUBD1-204ENST00000376094 DDX27Q96GQ7 796 aaKnown RBP10.31□□□□□ -0.76
TUBD1-204ENST00000376094 DSG2Q14126 1118 aa10.3□□□□□ -0.76
TUBD1-204ENST00000376094 MFSD10Q14728 455 aa10.3□□□□□ -0.76
TUBD1-204ENST00000376094 PPP1R15BQ5SWA1 713 aa10.3□□□□□ -0.76
TUBD1-204ENST00000376094 PLPP6Q8IY26 295 aa10.29□□□□□ -0.76
TUBD1-204ENST00000376094 MMRN1Q13201 1228 aa10.28□□□□□ -0.76
TUBD1-204ENST00000376094 DOK7Q18PE1 504 aa10.27□□□□□ -0.77
TUBD1-204ENST00000376094 VSIG10Q8N0Z9 540 aa10.27□□□□□ -0.77
TUBD1-204ENST00000376094 RIMBP2O15034 1052 aa10.24□□□□□ -0.77
TUBD1-204ENST00000376094 HOXB3P14651 431 aaPredicted RBP10.22□□□□□ -0.77
TUBD1-204ENST00000376094 ZNF710Q8N1W2 664 aa10.22□□□□□ -0.77
TUBD1-204ENST00000376094 SLC34A2O95436 690 aa10.21□□□□□ -0.77
TUBD1-204ENST00000376094 SPNS2Q8IVW8 549 aa10.2□□□□□ -0.78
TUBD1-204ENST00000376094 E2F4Q16254 413 aa10.19□□□□□ -0.78
TUBD1-204ENST00000376094 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
TUBD1-204ENST00000376094 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
TUBD1-204ENST00000376094 CAMK2BQ13554 666 aa10.18□□□□□ -0.78
TUBD1-204ENST00000376094 TBC1D12O60347 775 aa10.17□□□□□ -0.78
TUBD1-204ENST00000376094 PTCD2Q8WV60 388 aaKnown RBP10.16□□□□□ -0.78
TUBD1-204ENST00000376094 P3H3Q8IVL6 736 aa10.15□□□□□ -0.78
TUBD1-204ENST00000376094 UPF1Q92900 1129 aaKnown RBP eCLIP10.15□□□□□ -0.78
TUBD1-204ENST00000376094 OXER1Q8TDS5 423 aa10.14□□□□□ -0.79
TUBD1-204ENST00000376094 PCDHGA4Q9Y5G9 962 aa10.14□□□□□ -0.79
TUBD1-204ENST00000376094 ST18O60284 1047 aa10.13□□□□□ -0.79
TUBD1-204ENST00000376094 EMILIN3Q9NT22 766 aa10.13□□□□□ -0.79
TUBD1-204ENST00000376094 MAP3K9P80192 1104 aa10.12□□□□□ -0.79
TUBD1-204ENST00000376094 ARSIQ5FYB1 569 aa10.12□□□□□ -0.79
TUBD1-204ENST00000376094 HOXB1P14653 301 aaPredicted RBP10.11□□□□□ -0.79
TUBD1-204ENST00000376094 GPR153Q6NV75 609 aa10.11□□□□□ -0.79
TUBD1-204ENST00000376094 ZNF316A6NFI3 1004 aaPredicted RBP10.1□□□□□ -0.79
TUBD1-204ENST00000376094 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
TUBD1-204ENST00000376094 DPYSL4O14531 572 aa10.08□□□□□ -0.8
TUBD1-204ENST00000376094 ARIH1Q9Y4X5 557 aaPredicted RBP10.08□□□□□ -0.8
TUBD1-204ENST00000376094 ARHGEF1Q92888 912 aaKnown RBP10.07□□□□□ -0.8
TUBD1-204ENST00000376094 NUDT7P0C024 238 aa10.06□□□□□ -0.8
TUBD1-204ENST00000376094 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.81e-7■■■■□ 24
TUBD1-204ENST00000376094 SPDYE16A6NNV3 312 aaPredicted RBP10.04□□□□□ -0.8
TUBD1-204ENST00000376094 EVI5O60447 810 aa10.04□□□□□ -0.8
TUBD1-204ENST00000376094 EMP3P54852 163 aa10.04□□□□□ -0.8
TUBD1-204ENST00000376094 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
TUBD1-204ENST00000376094 ERBB3P21860 1342 aa10.01□□□□□ -0.81
TUBD1-204ENST00000376094 KDM4FA0A1W2PPD8 638 aa10□□□□□ -0.81
TUBD1-204ENST00000376094 PDIA6Q15084 440 aa10□□□□□ -0.81
TUBD1-204ENST00000376094 ANO8Q9HCE9 1232 aaPredicted RBP10□□□□□ -0.81
TUBD1-204ENST00000376094 PSDA5PKW4 1024 aaPredicted RBP9.98□□□□□ -0.81
TUBD1-204ENST00000376094 LHX6Q9UPM6 363 aa9.98□□□□□ -0.81
TUBD1-204ENST00000376094 FAM205CA6NFA0 338 aa9.96□□□□□ -0.82
TUBD1-204ENST00000376094 PTGER2P43116 358 aa9.94□□□□□ -0.82
TUBD1-204ENST00000376094 VARS2Q5ST30 1063 aaKnown RBP9.94□□□□□ -0.82
TUBD1-204ENST00000376094 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
TUBD1-204ENST00000376094 JPH4Q96JJ6 628 aa9.93□□□□□ -0.82
TUBD1-204ENST00000376094 NBR1Q14596 966 aa9.92□□□□□ -0.82
TUBD1-204ENST00000376094 ZNF454Q8N9F8 522 aa9.92□□□□□ -0.82
TUBD1-204ENST00000376094 HS3ST6Q96QI5 342 aa9.92□□□□□ -0.82
TUBD1-204ENST00000376094 PHF14O94880 888 aa9.91□□□□□ -0.82
TUBD1-204ENST00000376094 FOSBP53539 338 aa9.91□□□□□ -0.82
TUBD1-204ENST00000376094 DDX12PQ92771 950 aa9.91□□□□□ -0.82
TUBD1-204ENST00000376094 EPAS1Q99814 870 aa9.9□□□□□ -0.82
TUBD1-204ENST00000376094 GRXCR2A6NFK2 248 aa9.89□□□□□ -0.83
TUBD1-204ENST00000376094 SEMA3EO15041 775 aa9.89□□□□□ -0.83
TUBD1-204ENST00000376094 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
TUBD1-204ENST00000376094 FBXW7Q969H0 707 aa9.88□□□□□ -0.83
TUBD1-204ENST00000376094 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
TUBD1-204ENST00000376094 SMYD5Q6GMV2 418 aa9.87□□□□□ -0.83
TUBD1-204ENST00000376094 ZNF687Q8N1G0 1237 aa9.87□□□□□ -0.83
TUBD1-204ENST00000376094 PCDHGA10Q9Y5H3 936 aa9.87□□□□□ -0.83
TUBD1-204ENST00000376094 POTEB3A0JP26 581 aa9.86□□□□□ -0.83
TUBD1-204ENST00000376094 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
TUBD1-204ENST00000376094 POTEBQ6S5H4 581 aa9.86□□□□□ -0.83
TUBD1-204ENST00000376094 MLLT3P42568 568 aaPredicted RBP9.85□□□□□ -0.83
TUBD1-204ENST00000376094 TULP1O00294 542 aaPredicted RBP9.84□□□□□ -0.83
TUBD1-204ENST00000376094 KCNH8Q96L42 1107 aa9.84□□□□□ -0.83
TUBD1-204ENST00000376094 PBX2P40425 430 aa9.83□□□□□ -0.84
TUBD1-204ENST00000376094 BCL2L12Q9HB09 334 aa9.83□□□□□ -0.84
TUBD1-204ENST00000376094 ADAM33Q9BZ11 813 aa9.82□□□□□ -0.84
TUBD1-204ENST00000376094 MAP3K7O43318 606 aa9.81□□□□□ -0.84
TUBD1-204ENST00000376094 OSBPP22059 807 aa9.81□□□□□ -0.84
TUBD1-204ENST00000376094 EN1Q05925 392 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms