RNA–Protein interactions for RNA: ENST00000375440.8

CUL4A-202, Transcript of cullin 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL4A, Length 2,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-202ENST00000375440 SHROOM2Q13796 1616 aa37.93■■■■□ 3.66
CUL4A-202ENST00000375440 CAMSAP2Q08AD1 1489 aa37.92■■■■□ 3.66
CUL4A-202ENST00000375440 CFDP1Q9UEE9 299 aaPredicted RBP37.91■■■■□ 3.66
CUL4A-202ENST00000375440 PPP1R15AO75807 674 aaPredicted RBP37.9■■■■□ 3.66
CUL4A-202ENST00000375440 DENND4BO75064 1496 aaPredicted RBP37.9■■■■□ 3.66
CUL4A-202ENST00000375440 PLEKHD1A6NEE1 506 aa37.88■■■■□ 3.66
CUL4A-202ENST00000375440 ABCC10Q5T3U5 1492 aa37.84■■■■□ 3.65
CUL4A-202ENST00000375440 TONSLQ96HA7 1378 aa37.83■■■■□ 3.65
CUL4A-202ENST00000375440 CDC42BPAQ5VT25 1732 aa37.82■■■■□ 3.65
CUL4A-202ENST00000375440 TRIM52Q96A61 297 aa37.82■■■■□ 3.64
CUL4A-202ENST00000375440 ACIN1Q9UKV3 1341 aaKnown RBP37.8■■■■□ 3.64
CUL4A-202ENST00000375440 CENPBP07199 599 aaPredicted RBP37.76■■■■□ 3.64
CUL4A-202ENST00000375440 CROCC2H7BZ55 1655 aa37.75■■■■□ 3.63
CUL4A-202ENST00000375440 MPHOSPH9Q99550 1183 aa37.74■■■■□ 3.63
CUL4A-202ENST00000375440 ZNF777Q9ULD5 760 aaPredicted RBP37.74■■■■□ 3.63
CUL4A-202ENST00000375440 ADGBQ8N7X0 1667 aa37.73■■■■□ 3.63
CUL4A-202ENST00000375440 ERCC6L2Q5T890 1561 aa37.73■■■■□ 3.63
CUL4A-202ENST00000375440 SCAF1Q9H7N4 1312 aaKnown RBP37.73■■■■□ 3.63
CUL4A-202ENST00000375440 KDM5BQ9UGL1 1544 aa37.7■■■■□ 3.63
CUL4A-202ENST00000375440 NCOA1Q15788 1441 aa37.7■■■■□ 3.63
CUL4A-202ENST00000375440 ADGRL2O95490 1459 aa37.69■■■■□ 3.62
CUL4A-202ENST00000375440 CLASP1Q7Z460 1538 aa37.64■■■■□ 3.62
CUL4A-202ENST00000375440 YTHDC1Q96MU7 727 aaKnown RBP37.6■■■■□ 3.61
CUL4A-202ENST00000375440 ABCC2Q92887 1545 aa37.58■■■■□ 3.61
CUL4A-202ENST00000375440 SHANK2Q9UPX8 1470 aa37.55■■■■□ 3.6
CUL4A-202ENST00000375440 ANKRD30AQ9BXX3 1397 aa37.55■■■■□ 3.6
CUL4A-202ENST00000375440 FOXD1Q16676 465 aa37.55■■■■□ 3.6
CUL4A-202ENST00000375440 ANKRD30BQ9BXX2 1392 aa37.52■■■■□ 3.6
CUL4A-202ENST00000375440 CDC42BPBQ9Y5S2 1711 aa37.52■■■■□ 3.6
CUL4A-202ENST00000375440 PREX2Q70Z35 1606 aa37.51■■■■□ 3.6
CUL4A-202ENST00000375440 PZPP20742 1482 aa37.5■■■■□ 3.59
CUL4A-202ENST00000375440 C9orf84Q5VXU9 1444 aa37.48■■■■□ 3.59
CUL4A-202ENST00000375440 SLC4A1APQ9BWU0 796 aaKnown RBP37.48■■■■□ 3.59
CUL4A-202ENST00000375440 ARHGEF5Q12774 1597 aa37.47■■■■□ 3.59
CUL4A-202ENST00000375440 HIRIP3Q9BW71 556 aaPredicted RBP37.46■■■■□ 3.59
CUL4A-202ENST00000375440 MBD5Q9P267 1494 aa37.45■■■■□ 3.59
CUL4A-202ENST00000375440 SAMD9LQ8IVG5 1584 aa37.45■■■■□ 3.59
CUL4A-202ENST00000375440 ANKRD50Q9ULJ7 1429 aa37.43■■■■□ 3.58
CUL4A-202ENST00000375440 TTC37Q6PGP7 1564 aa37.43■■■■□ 3.58
CUL4A-202ENST00000375440 RPRD2Q5VT52 1461 aaKnown RBP37.43■■■■□ 3.58
CUL4A-202ENST00000375440 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.41■■■■□ 3.583e-8■■■□□ 17.7
CUL4A-202ENST00000375440 HNRNPMP52272 730 aaKnown RBP eCLIP37.4■■■■□ 3.581e-8■■■■■ 89.9
CUL4A-202ENST00000375440 DDX10Q13206 875 aaKnown RBP37.39■■■■□ 3.58
CUL4A-202ENST00000375440 TSPY4P0CV99 314 aa37.37■■■■□ 3.57
CUL4A-202ENST00000375440 TSPY10P0CW01 314 aa37.37■■■■□ 3.57
CUL4A-202ENST00000375440 UHRF1BP1LA0JNW5 1464 aa37.37■■■■□ 3.57
CUL4A-202ENST00000375440 L3MBTL2Q969R5 705 aa37.36■■■■□ 3.57
CUL4A-202ENST00000375440 CCDC141Q6ZP82 1450 aa37.33■■■■□ 3.57
CUL4A-202ENST00000375440 ZCCHC11Q5TAX3 1644 aaKnown RBP37.33■■■■□ 3.57
CUL4A-202ENST00000375440 TEX14Q8IWB6 1497 aa37.31■■■■□ 3.56
CUL4A-202ENST00000375440 ARHGAP5Q13017 1502 aa37.29■■■■□ 3.56
CUL4A-202ENST00000375440 MYO5CQ9NQX4 1742 aa37.29■■■■□ 3.56
CUL4A-202ENST00000375440 KIAA1107Q9UPP5 1409 aa37.28■■■■□ 3.56
CUL4A-202ENST00000375440 KIF15Q9NS87 1388 aa37.28■■■■□ 3.56
CUL4A-202ENST00000375440 RSPH4AQ5TD94 716 aa37.26■■■■□ 3.55
CUL4A-202ENST00000375440 SYCP2Q9BX26 1530 aa37.25■■■■□ 3.55
CUL4A-202ENST00000375440 GTF3C3Q9Y5Q9 886 aa37.25■■■■□ 3.55
CUL4A-202ENST00000375440 KDM5DQ9BY66 1539 aa37.22■■■■□ 3.55
CUL4A-202ENST00000375440 PKD2Q13563 968 aa37.21■■■■□ 3.55
CUL4A-202ENST00000375440 KCNH8Q96L42 1107 aa37.2■■■■□ 3.55
CUL4A-202ENST00000375440 NUP155O75694 1391 aa37.19■■■■□ 3.54
CUL4A-202ENST00000375440 MAST1Q9Y2H9 1570 aa37.17■■■■□ 3.54
CUL4A-202ENST00000375440 HSPA5P11021 654 aaKnown RBP37.14■■■■□ 3.54
CUL4A-202ENST00000375440 PLEKHH2Q8IVE3 1493 aa37.14■■■■□ 3.54
CUL4A-202ENST00000375440 NBPF8Q3BBV2 869 aa37.13■■■■□ 3.53
CUL4A-202ENST00000375440 PLCH2O75038 1416 aa37.12■■■■□ 3.53
CUL4A-202ENST00000375440 EIF4G2P78344 907 aaKnown RBP eCLIP37.09■■■■□ 3.533e-7■■■■□ 20.7
CUL4A-202ENST00000375440 ARHGEF12Q9NZN5 1544 aa37.08■■■■□ 3.53
CUL4A-202ENST00000375440 PLXNC1O60486 1568 aa37.04■■■■□ 3.52
CUL4A-202ENST00000375440 EFCAB2Q5VUJ9 269 aa36.99■■■■□ 3.51
CUL4A-202ENST00000375440 WASHC2AQ641Q2 1341 aa36.99■■■■□ 3.51
CUL4A-202ENST00000375440 FAM135AQ9P2D6 1515 aa36.98■■■■□ 3.51
CUL4A-202ENST00000375440 ABCC1P33527 1531 aa36.98■■■■□ 3.51
CUL4A-202ENST00000375440 UNC13BO14795 1591 aa36.96■■■■□ 3.51
CUL4A-202ENST00000375440 ANP32CO43423 234 aa36.96■■■■□ 3.51
CUL4A-202ENST00000375440 ARAP3Q8WWN8 1544 aa36.93■■■■□ 3.5
CUL4A-202ENST00000375440 WDR7Q9Y4E6 1490 aa36.92■■■■□ 3.5
CUL4A-202ENST00000375440 SPATA31E1Q6ZUB1 1445 aa36.92■■■■□ 3.5
CUL4A-202ENST00000375440 CCER2I3L3R5 266 aa36.9■■■■□ 3.5
CUL4A-202ENST00000375440 DUOX2Q9NRD8 1548 aa36.89■■■■□ 3.5
CUL4A-202ENST00000375440 TRAPPC8Q9Y2L5 1435 aa36.88■■■■□ 3.49
CUL4A-202ENST00000375440 C11orf95C9JLR9 678 aaPredicted RBP36.84■■■■□ 3.49
CUL4A-202ENST00000375440 UHRF1BP1Q6BDS2 1440 aa36.82■■■■□ 3.49
CUL4A-202ENST00000375440 IQGAP3Q86VI3 1631 aa36.81■■■■□ 3.48
CUL4A-202ENST00000375440 ERBINQ96RT1 1412 aa36.81■■■■□ 3.48
CUL4A-202ENST00000375440 OSCARQ8IYS5 282 aa36.81■■■■□ 3.48
CUL4A-202ENST00000375440 CCDC7Q96M83 1385 aa36.8■■■■□ 3.48
CUL4A-202ENST00000375440 ABCA9Q8IUA7 1624 aa36.79■■■■□ 3.48
CUL4A-202ENST00000375440 MAGI2Q86UL8 1455 aa36.78■■■■□ 3.48
CUL4A-202ENST00000375440 POLR1AO95602 1720 aaPredicted RBP36.77■■■■□ 3.48
CUL4A-202ENST00000375440 ZNF326Q5BKZ1 582 aaKnown RBP36.75■■■■□ 3.47
CUL4A-202ENST00000375440 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.75■■■■□ 3.472e-7■■□□□ 14.1
CUL4A-202ENST00000375440 CNTLNQ9NXG0 1405 aa36.74■■■■□ 3.47
CUL4A-202ENST00000375440 ASXL2Q76L83 1435 aa36.73■■■■□ 3.47
CUL4A-202ENST00000375440 PLA2R1Q13018 1463 aa36.72■■■■□ 3.47
CUL4A-202ENST00000375440 RTEL1-TNFRSF6BF6WH68 1400 aa36.71■■■■□ 3.47
CUL4A-202ENST00000375440 RALGAPBQ86X10 1494 aa36.71■■■■□ 3.47
CUL4A-202ENST00000375440 FANCAO15360 1455 aa36.7■■■■□ 3.47
CUL4A-202ENST00000375440 ZFYVE16Q7Z3T8 1539 aa36.7■■■■□ 3.47
CUL4A-202ENST00000375440 AFAP1Q8N556 730 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms