RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 EIF4G1Q04637 1599 aaKnown RBP18.87■□□□□ 0.61
NOTCH4-201ENST00000375023 NUTM2DQ5VT03 806 aaPredicted RBP18.87■□□□□ 0.61
NOTCH4-201ENST00000375023 GOLGA6L4A6NEF3 574 aa18.86■□□□□ 0.61
NOTCH4-201ENST00000375023 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
NOTCH4-201ENST00000375023 DRC7Q8IY82 874 aa18.86■□□□□ 0.61
NOTCH4-201ENST00000375023 ANP32EQ9BTT0 268 aa18.85■□□□□ 0.61
NOTCH4-201ENST00000375023 MORC1Q86VD1 984 aa18.83■□□□□ 0.61
NOTCH4-201ENST00000375023 PPP4R2Q9NY27 417 aa18.83■□□□□ 0.6
NOTCH4-201ENST00000375023 WWC1Q8IX03 1113 aa18.83■□□□□ 0.6
NOTCH4-201ENST00000375023 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
NOTCH4-201ENST00000375023 CHMP3Q9Y3E7 222 aa18.82■□□□□ 0.6
NOTCH4-201ENST00000375023 HSCBQ8IWL3 235 aa18.81■□□□□ 0.6
NOTCH4-201ENST00000375023 GNL2Q13823 731 aaKnown RBP18.8■□□□□ 0.6
NOTCH4-201ENST00000375023 GZF1Q9H116 711 aaPredicted RBP18.8■□□□□ 0.6
NOTCH4-201ENST00000375023 RTF1Q92541 710 aaKnown RBP18.79■□□□□ 0.6
NOTCH4-201ENST00000375023 TMF1P82094 1093 aa18.79■□□□□ 0.6
NOTCH4-201ENST00000375023 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
NOTCH4-201ENST00000375023 FBXW7Q969H0 707 aa18.79■□□□□ 0.6
NOTCH4-201ENST00000375023 VPS53Q5VIR6 699 aa18.76■□□□□ 0.59
NOTCH4-201ENST00000375023 LTV1Q96GA3 475 aaPredicted RBP18.76■□□□□ 0.59
NOTCH4-201ENST00000375023 RAD21O60216 631 aa18.76■□□□□ 0.59
NOTCH4-201ENST00000375023 GTF2E1P29083 439 aaPredicted RBP18.75■□□□□ 0.59
NOTCH4-201ENST00000375023 CNKSR2Q8WXI2 1034 aa18.75■□□□□ 0.59
NOTCH4-201ENST00000375023 NOL8Q76FK4 1167 aaKnown RBP18.74■□□□□ 0.59
NOTCH4-201ENST00000375023 EVA1CP58658 441 aa18.74■□□□□ 0.59
NOTCH4-201ENST00000375023 FOXD4L1Q9NU39 408 aa18.73■□□□□ 0.59
NOTCH4-201ENST00000375023 SAMD1Q6SPF0 538 aaPredicted RBP18.73■□□□□ 0.59
NOTCH4-201ENST00000375023 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
NOTCH4-201ENST00000375023 CWC22Q9HCG8 908 aaKnown RBP18.72■□□□□ 0.59
NOTCH4-201ENST00000375023 CCNB3Q8WWL7 1395 aa18.72■□□□□ 0.59
NOTCH4-201ENST00000375023 ITPRIPQ8IWB1 547 aa18.71■□□□□ 0.59
NOTCH4-201ENST00000375023 SLKQ9H2G2 1235 aaPredicted RBP18.7■□□□□ 0.58
NOTCH4-201ENST00000375023 CYB5RLQ6IPT4 315 aa18.69■□□□□ 0.58
NOTCH4-201ENST00000375023 FRAT2O75474 233 aaPredicted RBP18.69■□□□□ 0.58
NOTCH4-201ENST00000375023 HSPA5P11021 654 aaKnown RBP18.69■□□□□ 0.58
NOTCH4-201ENST00000375023 PNNQ9H307 717 aaKnown RBP18.69■□□□□ 0.58
NOTCH4-201ENST00000375023 MCCP23508 829 aa18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 U2AF1L5P0DN76 240 aaPredicted RBP18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 U2AF1Q01081 240 aaKnown RBP eCLIP18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 CCDC146Q8IYE0 955 aa18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 HSP90B1P14625 803 aaKnown RBP18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 CREBRFQ8IUR6 639 aa18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 WRNQ14191 1432 aaPredicted RBP eCLIP18.68■□□□□ 0.58
NOTCH4-201ENST00000375023 MSNP26038 577 aaKnown RBP18.67■□□□□ 0.58
NOTCH4-201ENST00000375023 KANK1Q14678 1352 aa18.66■□□□□ 0.58
NOTCH4-201ENST00000375023 TAF7LQ5H9L4 462 aa18.65■□□□□ 0.58
NOTCH4-201ENST00000375023 FOXD4L5Q5VV16 416 aaPredicted RBP18.65■□□□□ 0.58
NOTCH4-201ENST00000375023 FOXD4L4Q8WXT5 416 aaPredicted RBP18.65■□□□□ 0.58
NOTCH4-201ENST00000375023 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.58
NOTCH4-201ENST00000375023 BAZ1BQ9UIG0 1483 aaKnown RBP18.64■□□□□ 0.57
NOTCH4-201ENST00000375023 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.57
NOTCH4-201ENST00000375023 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
NOTCH4-201ENST00000375023 MS4A1P11836 297 aa18.64■□□□□ 0.57
NOTCH4-201ENST00000375023 HDGFP51858 240 aaKnown RBP18.63■□□□□ 0.57
NOTCH4-201ENST00000375023 PKD2Q13563 968 aa18.63■□□□□ 0.57
NOTCH4-201ENST00000375023 DEKP35659 375 aaKnown RBP18.63■□□□□ 0.57
NOTCH4-201ENST00000375023 NRDCO43847 1150 aa18.63■□□□□ 0.57
NOTCH4-201ENST00000375023 CHMP4BQ9H444 224 aaKnown RBP18.63■□□□□ 0.57
NOTCH4-201ENST00000375023 CHAF1AQ13111 956 aaPredicted RBP18.62■□□□□ 0.57
NOTCH4-201ENST00000375023 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
NOTCH4-201ENST00000375023 TRIM6-TRIM34B2RNG4 842 aa18.62■□□□□ 0.57
NOTCH4-201ENST00000375023 MFAP1P55081 439 aaKnown RBP18.62■□□□□ 0.57
NOTCH4-201ENST00000375023 GORABQ5T7V8 394 aa18.61■□□□□ 0.57
NOTCH4-201ENST00000375023 HDGFL2Q7Z4V5 671 aaPredicted RBP18.61■□□□□ 0.57
NOTCH4-201ENST00000375023 PIP4K2BP78356 416 aa18.61■□□□□ 0.57
NOTCH4-201ENST00000375023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.59■□□□□ 0.57
NOTCH4-201ENST00000375023 NOC3LQ8WTT2 800 aaKnown RBP18.57■□□□□ 0.56
NOTCH4-201ENST00000375023 NGEFQ8N5V2 710 aa18.56■□□□□ 0.56
NOTCH4-201ENST00000375023 ROCK2O75116 1388 aaKnown RBP18.56■□□□□ 0.56
NOTCH4-201ENST00000375023 TOMM22Q9NS69 142 aa18.54■□□□□ 0.56
NOTCH4-201ENST00000375023 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
NOTCH4-201ENST00000375023 FOXD4L6Q3SYB3 417 aaPredicted RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 FOXD4L3Q6VB84 417 aaPredicted RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 RRP7AQ9Y3A4 280 aaKnown RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 NUTM2BA6NNL0 878 aaPredicted RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 NUTM2EB1AL46 878 aaPredicted RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 NUTM2AQ8IVF1 878 aaPredicted RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 KTN1Q86UP2 1357 aaKnown RBP18.53■□□□□ 0.56
NOTCH4-201ENST00000375023 NGDNQ8NEJ9 315 aaKnown RBP18.52■□□□□ 0.56
NOTCH4-201ENST00000375023 CFAP44Q96MT7 982 aa18.52■□□□□ 0.55
NOTCH4-201ENST00000375023 SMC4Q9NTJ3 1288 aa18.52■□□□□ 0.55
NOTCH4-201ENST00000375023 SF3B2Q13435 895 aaKnown RBP18.51■□□□□ 0.55
NOTCH4-201ENST00000375023 RCAN3Q9UKA8 241 aa18.51■□□□□ 0.55
NOTCH4-201ENST00000375023 EID1Q9Y6B2 187 aa18.51■□□□□ 0.55
NOTCH4-201ENST00000375023 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
NOTCH4-201ENST00000375023 KIAA2012Q0VF49 1180 aa18.51■□□□□ 0.55
NOTCH4-201ENST00000375023 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
NOTCH4-201ENST00000375023 EEA1Q15075 1411 aa18.5■□□□□ 0.55
NOTCH4-201ENST00000375023 KANK4Q5T7N3 995 aaPredicted RBP18.5■□□□□ 0.55
NOTCH4-201ENST00000375023 CTDP1Q9Y5B0 961 aaPredicted RBP18.5■□□□□ 0.55
NOTCH4-201ENST00000375023 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
NOTCH4-201ENST00000375023 IPO8O15397 1037 aaKnown RBP18.48■□□□□ 0.55
NOTCH4-201ENST00000375023 RB1CC1Q8TDY2 1594 aa18.47■□□□□ 0.55
NOTCH4-201ENST00000375023 HNRNPMP52272 730 aaKnown RBP eCLIP18.47■□□□□ 0.55
NOTCH4-201ENST00000375023 TNIKQ9UKE5 1360 aa18.47■□□□□ 0.55
NOTCH4-201ENST00000375023 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.47■□□□□ 0.55
NOTCH4-201ENST00000375023 CUX2O14529 1486 aa18.47■□□□□ 0.55
NOTCH4-201ENST00000375023 STK31Q9BXU1 1019 aa18.46■□□□□ 0.55
NOTCH4-201ENST00000375023 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
NOTCH4-201ENST00000375023 SOGA1O94964 1423 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms