RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 EFCAB2Q5VUJ9 269 aa33.89■■■■□ 3.02
TMEM54-202ENST00000373463 MTUS2Q5JR59 1369 aa33.88■■■■□ 3.01
TMEM54-202ENST00000373463 TIAM1Q13009 1591 aa33.88■■■■□ 3.01
TMEM54-202ENST00000373463 EHBP1L1Q8N3D4 1523 aa33.88■■■■□ 3.01
TMEM54-202ENST00000373463 SCAPERQ9BY12 1400 aa33.87■■■■□ 3.01
TMEM54-202ENST00000373463 KDM4FA0A1W2PPD8 638 aa33.84■■■■□ 3.01
TMEM54-202ENST00000373463 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
TMEM54-202ENST00000373463 ZMYM4Q5VZL5 1548 aa33.83■■■■□ 3.01
TMEM54-202ENST00000373463 POGZQ7Z3K3 1410 aa33.82■■■■□ 3
TMEM54-202ENST00000373463 ABCC1P33527 1531 aa33.76■■■■□ 3
TMEM54-202ENST00000373463 ARHGEF40Q8TER5 1519 aa33.76■■■■□ 3
TMEM54-202ENST00000373463 ARHGEF12Q9NZN5 1544 aa33.76■■■■□ 3
TMEM54-202ENST00000373463 SAMD9LQ8IVG5 1584 aa33.74■■■□□ 2.99
TMEM54-202ENST00000373463 MAP3K1Q13233 1512 aa33.74■■■□□ 2.99
TMEM54-202ENST00000373463 YEATS2Q9ULM3 1422 aa33.72■■■□□ 2.99
TMEM54-202ENST00000373463 ITSN2Q9NZM3 1697 aa33.71■■■□□ 2.99
TMEM54-202ENST00000373463 LRRC9Q6ZRR7 1453 aa33.71■■■□□ 2.99
TMEM54-202ENST00000373463 CCNB3Q8WWL7 1395 aa33.71■■■□□ 2.99
TMEM54-202ENST00000373463 KDM5CP41229 1560 aa33.7■■■□□ 2.99
TMEM54-202ENST00000373463 SUPT6HQ7KZ85 1726 aaKnown RBP33.7■■■□□ 2.98
TMEM54-202ENST00000373463 NCOA2Q15596 1464 aa33.69■■■□□ 2.98
TMEM54-202ENST00000373463 ZNF518AQ6AHZ1 1483 aa33.68■■■□□ 2.98
TMEM54-202ENST00000373463 ZFYVE16Q7Z3T8 1539 aa33.68■■■□□ 2.98
TMEM54-202ENST00000373463 TRAPPC8Q9Y2L5 1435 aa33.67■■■□□ 2.98
TMEM54-202ENST00000373463 MAGI2Q86UL8 1455 aa33.67■■■□□ 2.98
TMEM54-202ENST00000373463 KANK4Q5T7N3 995 aaPredicted RBP33.66■■■□□ 2.98
TMEM54-202ENST00000373463 AEBP2Q6ZN18 517 aaPredicted RBP33.66■■■□□ 2.98
TMEM54-202ENST00000373463 AFAP1Q8N556 730 aa33.66■■■□□ 2.98
TMEM54-202ENST00000373463 SIGLEC1Q9BZZ2 1709 aa33.65■■■□□ 2.98
TMEM54-202ENST00000373463 CFDP1Q9UEE9 299 aaPredicted RBP33.61■■■□□ 2.97
TMEM54-202ENST00000373463 ZNF777Q9ULD5 760 aaPredicted RBP33.61■■■□□ 2.97
TMEM54-202ENST00000373463 SYCP2Q9BX26 1530 aa33.61■■■□□ 2.97
TMEM54-202ENST00000373463 HECW2Q9P2P5 1572 aa33.59■■■□□ 2.97
TMEM54-202ENST00000373463 ZNF644Q9H582 1327 aaPredicted RBP33.55■■■□□ 2.96
TMEM54-202ENST00000373463 KIAA1107Q9UPP5 1409 aa33.54■■■□□ 2.96
TMEM54-202ENST00000373463 MLH3Q9UHC1 1453 aa33.54■■■□□ 2.96
TMEM54-202ENST00000373463 BCORL1Q5H9F3 1711 aa33.53■■■□□ 2.96
TMEM54-202ENST00000373463 ADAMTSL3P82987 1691 aa33.52■■■□□ 2.96
TMEM54-202ENST00000373463 DIP2CQ9Y2E4 1556 aa33.52■■■□□ 2.96
TMEM54-202ENST00000373463 PLEKHH2Q8IVE3 1493 aa33.52■■■□□ 2.96
TMEM54-202ENST00000373463 HNRNPMP52272 730 aaKnown RBP eCLIP33.52■■■□□ 2.96
TMEM54-202ENST00000373463 ABCA6Q8N139 1617 aa33.52■■■□□ 2.96
TMEM54-202ENST00000373463 KIDINS220Q9ULH0 1771 aa33.52■■■□□ 2.96
TMEM54-202ENST00000373463 ATP10AO60312 1499 aa33.5■■■□□ 2.95
TMEM54-202ENST00000373463 MBD5Q9P267 1494 aa33.48■■■□□ 2.95
TMEM54-202ENST00000373463 C9orf84Q5VXU9 1444 aa33.45■■■□□ 2.95
TMEM54-202ENST00000373463 ARID4BQ4LE39 1312 aaPredicted RBP33.44■■■□□ 2.94
TMEM54-202ENST00000373463 CAMSAP2Q08AD1 1489 aa33.44■■■□□ 2.94
TMEM54-202ENST00000373463 INO80Q9ULG1 1556 aaPredicted RBP33.42■■■□□ 2.94
TMEM54-202ENST00000373463 REREQ9P2R6 1566 aa33.41■■■□□ 2.94
TMEM54-202ENST00000373463 MADDQ8WXG6 1647 aa33.41■■■□□ 2.94
TMEM54-202ENST00000373463 APLP2Q06481 763 aa33.4■■■□□ 2.94
TMEM54-202ENST00000373463 MYOM3Q5VTT5 1437 aa33.38■■■□□ 2.93
TMEM54-202ENST00000373463 ATP7AQ04656 1500 aa33.38■■■□□ 2.93
TMEM54-202ENST00000373463 MYT1LQ9UL68 1186 aa33.36■■■□□ 2.93
TMEM54-202ENST00000373463 SPAG9O60271 1321 aaKnown RBP33.35■■■□□ 2.93
TMEM54-202ENST00000373463 MIA2Q96PC5 1412 aa33.31■■■□□ 2.92
TMEM54-202ENST00000373463 ARHGEF5Q12774 1597 aa33.3■■■□□ 2.92
TMEM54-202ENST00000373463 PTPRMP28827 1452 aa33.3■■■□□ 2.92
TMEM54-202ENST00000373463 RIMS1Q86UR5 1692 aaKnown RBP33.29■■■□□ 2.92
TMEM54-202ENST00000373463 CCDC141Q6ZP82 1450 aa33.29■■■□□ 2.92
TMEM54-202ENST00000373463 AGLP35573 1532 aa33.28■■■□□ 2.92
TMEM54-202ENST00000373463 MLECQ14165 292 aa33.27■■■□□ 2.92
TMEM54-202ENST00000373463 FER1L4A9Z1Z3 1794 aa33.24■■■□□ 2.91
TMEM54-202ENST00000373463 PLXNC1O60486 1568 aa33.24■■■□□ 2.91
TMEM54-202ENST00000373463 RTEL1-TNFRSF6BF6WH68 1400 aa33.23■■■□□ 2.91
TMEM54-202ENST00000373463 PTPN23Q9H3S7 1636 aa33.2■■■□□ 2.9
TMEM54-202ENST00000373463 ADGBQ8N7X0 1667 aa33.2■■■□□ 2.9
TMEM54-202ENST00000373463 FGD6Q6ZV73 1430 aa33.19■■■□□ 2.9
TMEM54-202ENST00000373463 A2MP01023 1474 aa33.18■■■□□ 2.9
TMEM54-202ENST00000373463 RSPH4AQ5TD94 716 aa33.17■■■□□ 2.9
TMEM54-202ENST00000373463 TCOF1Q13428 1488 aaKnown RBP33.15■■■□□ 2.9
TMEM54-202ENST00000373463 MAST1Q9Y2H9 1570 aa33.13■■■□□ 2.89
TMEM54-202ENST00000373463 CROCC2H7BZ55 1655 aa33.08■■■□□ 2.89
TMEM54-202ENST00000373463 ABCC5O15440 1437 aa33.06■■■□□ 2.88
TMEM54-202ENST00000373463 DNMT1P26358 1616 aaKnown RBP33.05■■■□□ 2.88
TMEM54-202ENST00000373463 DHX29Q7Z478 1369 aaKnown RBP33.05■■■□□ 2.88
TMEM54-202ENST00000373463 TSPY4P0CV99 314 aa33.04■■■□□ 2.88
TMEM54-202ENST00000373463 TSPY10P0CW01 314 aa33.04■■■□□ 2.88
TMEM54-202ENST00000373463 PPARGC1BQ86YN6 1023 aaKnown RBP33.01■■■□□ 2.87
TMEM54-202ENST00000373463 DAPK1P53355 1430 aa33■■■□□ 2.87
TMEM54-202ENST00000373463 SHANK2Q9UPX8 1470 aa32.99■■■□□ 2.87
TMEM54-202ENST00000373463 C3P01024 1663 aa32.98■■■□□ 2.87
TMEM54-202ENST00000373463 PLPPR3Q6T4P5 718 aa32.98■■■□□ 2.87
TMEM54-202ENST00000373463 CEBPAP49715 358 aaPredicted RBP32.97■■■□□ 2.87
TMEM54-202ENST00000373463 MROH2AA6NES4 1674 aa32.92■■■□□ 2.86
TMEM54-202ENST00000373463 CLTCQ00610 1675 aaKnown RBP32.92■■■□□ 2.86
TMEM54-202ENST00000373463 CNTLNQ9NXG0 1405 aa32.92■■■□□ 2.86
TMEM54-202ENST00000373463 LMTK3Q96Q04 1460 aa32.92■■■□□ 2.86
TMEM54-202ENST00000373463 GGT6Q6P531 493 aa32.91■■■□□ 2.86
TMEM54-202ENST00000373463 KIF3BO15066 747 aa32.88■■■□□ 2.85
TMEM54-202ENST00000373463 FAM50AQ14320 339 aaKnown RBP32.87■■■□□ 2.85
TMEM54-202ENST00000373463 EIF2AK4Q9P2K8 1649 aaKnown RBP32.85■■■□□ 2.85
TMEM54-202ENST00000373463 DUOX2Q9NRD8 1548 aa32.85■■■□□ 2.85
TMEM54-202ENST00000373463 RNF17Q9BXT8 1623 aaKnown RBP32.84■■■□□ 2.85
TMEM54-202ENST00000373463 ESF1Q9H501 851 aaKnown RBP32.84■■■□□ 2.85
TMEM54-202ENST00000373463 KIF15Q9NS87 1388 aa32.83■■■□□ 2.85
TMEM54-202ENST00000373463 ZMYM3Q14202 1370 aa32.82■■■□□ 2.84
TMEM54-202ENST00000373463 MROH1Q8NDA8 1641 aa32.81■■■□□ 2.84
TMEM54-202ENST00000373463 PREX1Q8TCU6 1659 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms