RNA–Protein interactions for RNA: ENST00000373337.3

TMEM35B-201, Transcript of transmembrane protein 35B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM35B, Length 922 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35B-201ENST00000373337 CLIP1P30622 1438 aa32.59■■■□□ 2.81
TMEM35B-201ENST00000373337 BCORL1Q5H9F3 1711 aa32.54■■■□□ 2.8
TMEM35B-201ENST00000373337 POGZQ7Z3K3 1410 aa32.51■■■□□ 2.8
TMEM35B-201ENST00000373337 CDC42BPBQ9Y5S2 1711 aa32.51■■■□□ 2.8
TMEM35B-201ENST00000373337 MAGI2Q86UL8 1455 aa32.5■■■□□ 2.79
TMEM35B-201ENST00000373337 PREX2Q70Z35 1606 aa32.48■■■□□ 2.79
TMEM35B-201ENST00000373337 ZFYVE16Q7Z3T8 1539 aa32.47■■■□□ 2.79
TMEM35B-201ENST00000373337 SCAPERQ9BY12 1400 aa32.47■■■□□ 2.79
TMEM35B-201ENST00000373337 SIGLEC1Q9BZZ2 1709 aa32.47■■■□□ 2.79
TMEM35B-201ENST00000373337 ARHGAP5Q13017 1502 aa32.44■■■□□ 2.78
TMEM35B-201ENST00000373337 EFCAB2Q5VUJ9 269 aa32.43■■■□□ 2.78
TMEM35B-201ENST00000373337 CDC42BPAQ5VT25 1732 aa32.43■■■□□ 2.78
TMEM35B-201ENST00000373337 YEATS2Q9ULM3 1422 aa32.43■■■□□ 2.78
TMEM35B-201ENST00000373337 HECW2Q9P2P5 1572 aa32.42■■■□□ 2.78
TMEM35B-201ENST00000373337 MADDQ8WXG6 1647 aa32.41■■■□□ 2.78
TMEM35B-201ENST00000373337 KDM5CP41229 1560 aa32.41■■■□□ 2.78
TMEM35B-201ENST00000373337 PTPRMP28827 1452 aa32.37■■■□□ 2.77
TMEM35B-201ENST00000373337 ZNF518AQ6AHZ1 1483 aa32.35■■■□□ 2.77
TMEM35B-201ENST00000373337 ABCC1P33527 1531 aa32.33■■■□□ 2.77
TMEM35B-201ENST00000373337 ITSN2Q9NZM3 1697 aa32.32■■■□□ 2.76
TMEM35B-201ENST00000373337 CEP162Q5TB80 1403 aa32.31■■■□□ 2.76
TMEM35B-201ENST00000373337 RIMS1Q86UR5 1692 aaKnown RBP32.29■■■□□ 2.76
TMEM35B-201ENST00000373337 ARID4BQ4LE39 1312 aaPredicted RBP32.27■■■□□ 2.76
TMEM35B-201ENST00000373337 ATP10AO60312 1499 aa32.27■■■□□ 2.76
TMEM35B-201ENST00000373337 ARHGEF12Q9NZN5 1544 aa32.26■■■□□ 2.76
TMEM35B-201ENST00000373337 C9orf84Q5VXU9 1444 aa32.25■■■□□ 2.75
TMEM35B-201ENST00000373337 REREQ9P2R6 1566 aa32.23■■■□□ 2.75
TMEM35B-201ENST00000373337 DIP2CQ9Y2E4 1556 aa32.23■■■□□ 2.75
TMEM35B-201ENST00000373337 GPATCH8Q9UKJ3 1502 aaKnown RBP32.22■■■□□ 2.75
TMEM35B-201ENST00000373337 MLH3Q9UHC1 1453 aa32.22■■■□□ 2.75
TMEM35B-201ENST00000373337 FER1L4A9Z1Z3 1794 aa32.22■■■□□ 2.75
TMEM35B-201ENST00000373337 SAMD9LQ8IVG5 1584 aa32.21■■■□□ 2.75
TMEM35B-201ENST00000373337 ABCA6Q8N139 1617 aa32.2■■■□□ 2.75
TMEM35B-201ENST00000373337 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
TMEM35B-201ENST00000373337 TRAPPC8Q9Y2L5 1435 aa32.18■■■□□ 2.74
TMEM35B-201ENST00000373337 PLPPR3Q6T4P5 718 aa32.18■■■□□ 2.74
TMEM35B-201ENST00000373337 EHBP1L1Q8N3D4 1523 aa32.16■■■□□ 2.74
TMEM35B-201ENST00000373337 KIDINS220Q9ULH0 1771 aa32.16■■■□□ 2.74
TMEM35B-201ENST00000373337 MTUS2Q5JR59 1369 aa32.11■■■□□ 2.73
TMEM35B-201ENST00000373337 TIAM1Q13009 1591 aa32.11■■■□□ 2.73
TMEM35B-201ENST00000373337 SYCP2Q9BX26 1530 aa32.1■■■□□ 2.73
TMEM35B-201ENST00000373337 AGLP35573 1532 aa32.06■■■□□ 2.72
TMEM35B-201ENST00000373337 LMTK3Q96Q04 1460 aa32.06■■■□□ 2.72
TMEM35B-201ENST00000373337 KIAA1107Q9UPP5 1409 aa32.06■■■□□ 2.72
TMEM35B-201ENST00000373337 PLEKHH2Q8IVE3 1493 aa32.04■■■□□ 2.72
TMEM35B-201ENST00000373337 CCNB3Q8WWL7 1395 aa32.04■■■□□ 2.72
TMEM35B-201ENST00000373337 INO80Q9ULG1 1556 aaPredicted RBP32.01■■■□□ 2.71
TMEM35B-201ENST00000373337 MLECQ14165 292 aa32■■■□□ 2.71
TMEM35B-201ENST00000373337 LOC105371045A0A1W2PR82 267 aa31.99■■■□□ 2.71
TMEM35B-201ENST00000373337 SUPT6HQ7KZ85 1726 aaKnown RBP31.99■■■□□ 2.71
TMEM35B-201ENST00000373337 VPS8Q8N3P4 1428 aa31.99■■■□□ 2.71
TMEM35B-201ENST00000373337 CFDP1Q9UEE9 299 aaPredicted RBP31.97■■■□□ 2.71
TMEM35B-201ENST00000373337 ZNF777Q9ULD5 760 aaPredicted RBP31.96■■■□□ 2.71
TMEM35B-201ENST00000373337 ATP7AQ04656 1500 aa31.95■■■□□ 2.71
TMEM35B-201ENST00000373337 MYT1LQ9UL68 1186 aa31.92■■■□□ 2.7
TMEM35B-201ENST00000373337 PLXNC1O60486 1568 aa31.92■■■□□ 2.7
TMEM35B-201ENST00000373337 NCOA2Q15596 1464 aa31.91■■■□□ 2.7
TMEM35B-201ENST00000373337 HNRNPMP52272 730 aaKnown RBP eCLIP31.91■■■□□ 2.7
TMEM35B-201ENST00000373337 PREX1Q8TCU6 1659 aa31.9■■■□□ 2.7
TMEM35B-201ENST00000373337 MBD5Q9P267 1494 aa31.9■■■□□ 2.7
TMEM35B-201ENST00000373337 C3P01024 1663 aa31.88■■■□□ 2.69
TMEM35B-201ENST00000373337 MAP3K1Q13233 1512 aa31.87■■■□□ 2.69
TMEM35B-201ENST00000373337 SPAG9O60271 1321 aaKnown RBP31.87■■■□□ 2.69
TMEM35B-201ENST00000373337 ADGBQ8N7X0 1667 aa31.86■■■□□ 2.69
TMEM35B-201ENST00000373337 MSH5O43196 834 aa31.85■■■□□ 2.69
TMEM35B-201ENST00000373337 LRRC9Q6ZRR7 1453 aa31.84■■■□□ 2.69
TMEM35B-201ENST00000373337 SETD1BQ9UPS6 1966 aaKnown RBP31.83■■■□□ 2.69
TMEM35B-201ENST00000373337 ZNF644Q9H582 1327 aaPredicted RBP31.82■■■□□ 2.68
TMEM35B-201ENST00000373337 MROH2AA6NES4 1674 aa31.81■■■□□ 2.68
TMEM35B-201ENST00000373337 A2MP01023 1474 aa31.78■■■□□ 2.68
TMEM35B-201ENST00000373337 CAMSAP2Q08AD1 1489 aa31.78■■■□□ 2.68
TMEM35B-201ENST00000373337 RTEL1-TNFRSF6BF6WH68 1400 aa31.77■■■□□ 2.68
TMEM35B-201ENST00000373337 CNTLNQ9NXG0 1405 aa31.76■■■□□ 2.68
TMEM35B-201ENST00000373337 CEBPAP49715 358 aaPredicted RBP31.76■■■□□ 2.67
TMEM35B-201ENST00000373337 ARHGEF5Q12774 1597 aa31.73■■■□□ 2.67
TMEM35B-201ENST00000373337 CCDC141Q6ZP82 1450 aa31.73■■■□□ 2.67
TMEM35B-201ENST00000373337 HSPA2P54652 639 aa31.71■■■□□ 2.67
TMEM35B-201ENST00000373337 CLTCQ00610 1675 aaKnown RBP31.68■■■□□ 2.66
TMEM35B-201ENST00000373337 PIAS4Q8N2W9 510 aaPredicted RBP31.66■■■□□ 2.66
TMEM35B-201ENST00000373337 UHRF1BP1Q6BDS2 1440 aa31.66■■■□□ 2.66
TMEM35B-201ENST00000373337 ILDR1Q86SU0 546 aaPredicted RBP31.65■■■□□ 2.66
TMEM35B-201ENST00000373337 KANK4Q5T7N3 995 aaPredicted RBP31.64■■■□□ 2.66
TMEM35B-201ENST00000373337 STRCQ7RTU9 1775 aa31.63■■■□□ 2.65
TMEM35B-201ENST00000373337 RSPH4AQ5TD94 716 aa31.63■■■□□ 2.65
TMEM35B-201ENST00000373337 ESF1Q9H501 851 aaKnown RBP31.62■■■□□ 2.65
TMEM35B-201ENST00000373337 NPATQ14207 1427 aa31.6■■■□□ 2.65
TMEM35B-201ENST00000373337 MAST1Q9Y2H9 1570 aa31.6■■■□□ 2.65
TMEM35B-201ENST00000373337 MYOM3Q5VTT5 1437 aa31.59■■■□□ 2.65
TMEM35B-201ENST00000373337 MIA2Q96PC5 1412 aa31.59■■■□□ 2.65
TMEM35B-201ENST00000373337 DHX29Q7Z478 1369 aaKnown RBP31.59■■■□□ 2.65
TMEM35B-201ENST00000373337 ZMYM3Q14202 1370 aa31.57■■■□□ 2.64
TMEM35B-201ENST00000373337 PPP6R1Q9UPN7 881 aa31.55■■■□□ 2.64
TMEM35B-201ENST00000373337 FAM135AQ9P2D6 1515 aa31.54■■■□□ 2.64
TMEM35B-201ENST00000373337 ZNF142P52746 1687 aaPredicted RBP31.52■■■□□ 2.64
TMEM35B-201ENST00000373337 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
TMEM35B-201ENST00000373337 PTPRKQ15262 1439 aa31.49■■■□□ 2.63
TMEM35B-201ENST00000373337 GGT6Q6P531 493 aa31.48■■■□□ 2.63
TMEM35B-201ENST00000373337 CROCC2H7BZ55 1655 aa31.47■■■□□ 2.63
TMEM35B-201ENST00000373337 RNF17Q9BXT8 1623 aaKnown RBP31.45■■■□□ 2.62
TMEM35B-201ENST00000373337 KDM5DQ9BY66 1539 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms