RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 TOPBP1Q92547 1522 aa32.46■■■□□ 2.79
CCND3-202ENST00000372988 SPATA31E1Q6ZUB1 1445 aa32.45■■■□□ 2.79
CCND3-202ENST00000372988 KIF7Q2M1P5 1343 aa32.42■■■□□ 2.78
CCND3-202ENST00000372988 NBR1Q14596 966 aa32.42■■■□□ 2.78
CCND3-202ENST00000372988 CHIC2Q9UKJ5 165 aa32.42■■■□□ 2.78
CCND3-202ENST00000372988 NBPF8Q3BBV2 869 aa32.39■■■□□ 2.78
CCND3-202ENST00000372988 RPRD2Q5VT52 1461 aaKnown RBP32.38■■■□□ 2.77
CCND3-202ENST00000372988 TEX14Q8IWB6 1497 aa32.38■■■□□ 2.77
CCND3-202ENST00000372988 IPO9Q96P70 1041 aaKnown RBP32.38■■■□□ 2.77
CCND3-202ENST00000372988 NUDCQ9Y266 331 aa32.36■■■□□ 2.77
CCND3-202ENST00000372988 KIF21AQ7Z4S6 1674 aa32.36■■■□□ 2.77
CCND3-202ENST00000372988 ANKRD30BQ9BXX2 1392 aa32.35■■■□□ 2.77
CCND3-202ENST00000372988 ANP32AP39687 249 aaKnown RBP32.33■■■□□ 2.77
CCND3-202ENST00000372988 CCDC136Q96JN2 1154 aa32.3■■■□□ 2.76
CCND3-202ENST00000372988 FOXD1Q16676 465 aa32.3■■■□□ 2.76
CCND3-202ENST00000372988 DHX29Q7Z478 1369 aaKnown RBP32.3■■■□□ 2.76
CCND3-202ENST00000372988 MIA2Q96PC5 1412 aa32.29■■■□□ 2.76
CCND3-202ENST00000372988 ZBTB47Q9UFB7 747 aaPredicted RBP32.23■■■□□ 2.75
CCND3-202ENST00000372988 RTL5Q5HYW3 569 aaPredicted RBP32.18■■■□□ 2.74
CCND3-202ENST00000372988 ROCK1Q13464 1354 aa32.18■■■□□ 2.74
CCND3-202ENST00000372988 EPRSP07814 1512 aaKnown RBP32.14■■■□□ 2.74
CCND3-202ENST00000372988 NESP48681 1621 aa32.13■■■□□ 2.73
CCND3-202ENST00000372988 BCORL1Q5H9F3 1711 aa32.11■■■□□ 2.73
CCND3-202ENST00000372988 GAPVD1Q14C86 1478 aa32.1■■■□□ 2.73
CCND3-202ENST00000372988 MBD5Q9P267 1494 aa32.1■■■□□ 2.73
CCND3-202ENST00000372988 DAPK1P53355 1430 aa32.09■■■□□ 2.73
CCND3-202ENST00000372988 PRKCSHP14314 528 aaPredicted RBP32.08■■■□□ 2.73
CCND3-202ENST00000372988 PNISRQ8TF01 805 aaKnown RBP32.08■■■□□ 2.73
CCND3-202ENST00000372988 LAMC3Q9Y6N6 1575 aa32.08■■■□□ 2.73
CCND3-202ENST00000372988 TDRD9Q8NDG6 1382 aaKnown RBP32.08■■■□□ 2.73
CCND3-202ENST00000372988 URB2Q14146 1524 aaKnown RBP32.05■■■□□ 2.72
CCND3-202ENST00000372988 ARID4BQ4LE39 1312 aaPredicted RBP32.05■■■□□ 2.72
CCND3-202ENST00000372988 DNMT1P26358 1616 aaKnown RBP32.05■■■□□ 2.72
CCND3-202ENST00000372988 CDK13Q14004 1512 aaKnown RBP32.03■■■□□ 2.72
CCND3-202ENST00000372988 ABCC5O15440 1437 aa32.03■■■□□ 2.72
CCND3-202ENST00000372988 SLC4A1APQ9BWU0 796 aaKnown RBP32.02■■■□□ 2.72
CCND3-202ENST00000372988 USP47Q96K76 1375 aa32.02■■■□□ 2.72
CCND3-202ENST00000372988 WDR62O43379 1518 aa31.99■■■□□ 2.71
CCND3-202ENST00000372988 LRPPRCP42704 1394 aaKnown RBP31.98■■■□□ 2.71
CCND3-202ENST00000372988 KDM5CP41229 1560 aa31.98■■■□□ 2.71
CCND3-202ENST00000372988 PZPP20742 1482 aa31.97■■■□□ 2.71
CCND3-202ENST00000372988 TCERG1O14776 1098 aaKnown RBP31.96■■■□□ 2.71
CCND3-202ENST00000372988 KIF14Q15058 1648 aa31.96■■■□□ 2.71
CCND3-202ENST00000372988 RRP1P56182 461 aaKnown RBP31.93■■■□□ 2.7
CCND3-202ENST00000372988 ROCK2O75116 1388 aaKnown RBP31.93■■■□□ 2.7
CCND3-202ENST00000372988 CNGB1Q14028 1251 aaPredicted RBP31.93■■■□□ 2.7
CCND3-202ENST00000372988 ANO8Q9HCE9 1232 aaPredicted RBP31.93■■■□□ 2.7
CCND3-202ENST00000372988 TMC1Q8TDI8 760 aa31.92■■■□□ 2.7
CCND3-202ENST00000372988 USP35Q9P2H5 1018 aa31.91■■■□□ 2.7
CCND3-202ENST00000372988 SENP3-EIF4A1A0A087X0R7 540 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 IL27Q8NEV9 243 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 POLR3GLQ9BT43 218 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 IQGAP2Q13576 1575 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 PDE4AP27815 886 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 EXOC6Q8TAG9 804 aa31.87■■■□□ 2.69
CCND3-202ENST00000372988 BRD4O60885 1362 aaPredicted RBP31.86■■■□□ 2.69
CCND3-202ENST00000372988 KIF15Q9NS87 1388 aa31.86■■■□□ 2.69
CCND3-202ENST00000372988 MS4A1P11836 297 aa31.85■■■□□ 2.69
CCND3-202ENST00000372988 BACH2Q9BYV9 841 aa31.85■■■□□ 2.69
CCND3-202ENST00000372988 KIAA1107Q9UPP5 1409 aa31.85■■■□□ 2.69
CCND3-202ENST00000372988 NPM2Q86SE8 214 aaKnown RBP31.84■■■□□ 2.69
CCND3-202ENST00000372988 KTN1Q86UP2 1357 aaKnown RBP31.82■■■□□ 2.69
CCND3-202ENST00000372988 UHRF1BP1Q6BDS2 1440 aa31.82■■■□□ 2.68
CCND3-202ENST00000372988 ZNF644Q9H582 1327 aaPredicted RBP31.82■■■□□ 2.68
CCND3-202ENST00000372988 SALL2Q9Y467 1007 aaPredicted RBP31.81■■■□□ 2.68
CCND3-202ENST00000372988 RALGAPBQ86X10 1494 aa31.8■■■□□ 2.68
CCND3-202ENST00000372988 NEFMP07197 916 aa31.8■■■□□ 2.68
CCND3-202ENST00000372988 MYBBP1AQ9BQG0 1328 aaKnown RBP31.8■■■□□ 2.68
CCND3-202ENST00000372988 WASHC2CQ9Y4E1 1318 aa31.8■■■□□ 2.68
CCND3-202ENST00000372988 RCAN3Q9UKA8 241 aa31.78■■■□□ 2.68
CCND3-202ENST00000372988 LAS1LQ9Y4W2 734 aaKnown RBP31.77■■■□□ 2.68
CCND3-202ENST00000372988 RALBP1Q15311 655 aa31.76■■■□□ 2.67
CCND3-202ENST00000372988 PPM1GO15355 546 aaPredicted RBP31.75■■■□□ 2.67
CCND3-202ENST00000372988 ZNF326Q5BKZ1 582 aaKnown RBP31.75■■■□□ 2.67
CCND3-202ENST00000372988 ARID3CA6NKF2 412 aa31.74■■■□□ 2.67
CCND3-202ENST00000372988 TARBP1Q13395 1621 aaKnown RBP31.73■■■□□ 2.67
CCND3-202ENST00000372988 E9PCH4 1651 aa31.73■■■□□ 2.67
CCND3-202ENST00000372988 ADGBQ8N7X0 1667 aa31.73■■■□□ 2.67
CCND3-202ENST00000372988 PDE3BQ13370 1112 aa31.7■■■□□ 2.67
CCND3-202ENST00000372988 ADGRL2O95490 1459 aa31.68■■■□□ 2.66
CCND3-202ENST00000372988 PBRM1Q86U86 1689 aa31.67■■■□□ 2.66
CCND3-202ENST00000372988 PKD2Q13563 968 aa31.66■■■□□ 2.66
CCND3-202ENST00000372988 ARHGEF12Q9NZN5 1544 aa31.66■■■□□ 2.66
CCND3-202ENST00000372988 CAMSAP2Q08AD1 1489 aa31.65■■■□□ 2.66
CCND3-202ENST00000372988 ADAMTS12P58397 1594 aa31.64■■■□□ 2.66
CCND3-202ENST00000372988 CARD11Q9BXL7 1154 aa31.64■■■□□ 2.66
CCND3-202ENST00000372988 NUP153P49790 1475 aaKnown RBP31.63■■■□□ 2.65
CCND3-202ENST00000372988 RTN4Q9NQC3 1192 aaKnown RBP31.63■■■□□ 2.65
CCND3-202ENST00000372988 DDRGK1Q96HY6 314 aa31.6■■■□□ 2.65
CCND3-202ENST00000372988 CROCC2H7BZ55 1655 aa31.6■■■□□ 2.65
CCND3-202ENST00000372988 PARD3Q8TEW0 1356 aa31.58■■■□□ 2.65
CCND3-202ENST00000372988 ST20-MTHFSA0A0A6YYL1 179 aa31.58■■■□□ 2.65
CCND3-202ENST00000372988 NLRP13Q86W25 1043 aa31.58■■■□□ 2.65
CCND3-202ENST00000372988 RAPGEF6Q8TEU7 1601 aa31.54■■■□□ 2.64
CCND3-202ENST00000372988 ITSN2Q9NZM3 1697 aa31.54■■■□□ 2.64
CCND3-202ENST00000372988 PDS5BQ9NTI5 1447 aa31.54■■■□□ 2.64
CCND3-202ENST00000372988 KIAA0556O60303 1618 aa31.54■■■□□ 2.64
CCND3-202ENST00000372988 INSRP06213 1382 aa31.52■■■□□ 2.64
CCND3-202ENST00000372988 KIAA0586Q9BVV6 1533 aa31.52■■■□□ 2.64
CCND3-202ENST00000372988 DISP1Q96F81 1524 aa31.51■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 208.5 ms