RNA–Protein interactions for RNA: ENST00000372397.6

TSC22D3-206, Transcript of TSC22 domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC22D3, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-206ENST00000372397 ADCY10Q96PN6 1610 aa18.29■□□□□ 0.52
TSC22D3-206ENST00000372397 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
TSC22D3-206ENST00000372397 TONSLQ96HA7 1378 aa18.27■□□□□ 0.52
TSC22D3-206ENST00000372397 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
TSC22D3-206ENST00000372397 ITSN2Q9NZM3 1697 aa18.27■□□□□ 0.52
TSC22D3-206ENST00000372397 GPATCH8Q9UKJ3 1502 aaKnown RBP18.27■□□□□ 0.51
TSC22D3-206ENST00000372397 ROCK1Q13464 1354 aa18.26■□□□□ 0.51
TSC22D3-206ENST00000372397 ATP10BO94823 1461 aa18.26■□□□□ 0.51
TSC22D3-206ENST00000372397 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
TSC22D3-206ENST00000372397 CAMSAP2Q08AD1 1489 aa18.24■□□□□ 0.51
TSC22D3-206ENST00000372397 PTPRGP23470 1445 aa18.24■□□□□ 0.51
TSC22D3-206ENST00000372397 DENND4BO75064 1496 aaPredicted RBP18.23■□□□□ 0.51
TSC22D3-206ENST00000372397 MPHOSPH9Q99550 1183 aa18.22■□□□□ 0.51
TSC22D3-206ENST00000372397 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
TSC22D3-206ENST00000372397 CDC42BPAQ5VT25 1732 aa18.18■□□□□ 0.5
TSC22D3-206ENST00000372397 ABCC10Q5T3U5 1492 aa18.17■□□□□ 0.5
TSC22D3-206ENST00000372397 SHROOM2Q13796 1616 aa18.17■□□□□ 0.5
TSC22D3-206ENST00000372397 ADGBQ8N7X0 1667 aa18.15■□□□□ 0.5
TSC22D3-206ENST00000372397 HIRIP3Q9BW71 556 aaPredicted RBP18.15■□□□□ 0.5
TSC22D3-206ENST00000372397 FOXD1Q16676 465 aa18.15■□□□□ 0.5
TSC22D3-206ENST00000372397 KDM5BQ9UGL1 1544 aa18.15■□□□□ 0.5
TSC22D3-206ENST00000372397 CROCC2H7BZ55 1655 aa18.14■□□□□ 0.49
TSC22D3-206ENST00000372397 NCOA1Q15788 1441 aa18.14■□□□□ 0.49
TSC22D3-206ENST00000372397 DDX10Q13206 875 aaKnown RBP18.12■□□□□ 0.49
TSC22D3-206ENST00000372397 GTF3C3Q9Y5Q9 886 aa18.11■□□□□ 0.49
TSC22D3-206ENST00000372397 ERCC6L2Q5T890 1561 aa18.11■□□□□ 0.49
TSC22D3-206ENST00000372397 ADGRL2O95490 1459 aa18.11■□□□□ 0.49
TSC22D3-206ENST00000372397 SLC4A1APQ9BWU0 796 aaKnown RBP18.09■□□□□ 0.49
TSC22D3-206ENST00000372397 ANKRD30AQ9BXX3 1397 aa18.09■□□□□ 0.49
TSC22D3-206ENST00000372397 ANKRD30BQ9BXX2 1392 aa18.08■□□□□ 0.49
TSC22D3-206ENST00000372397 MYT1Q01538 1121 aa18.08■□□□□ 0.48
TSC22D3-206ENST00000372397 PZPP20742 1482 aa18.05■□□□□ 0.48
TSC22D3-206ENST00000372397 L3MBTL2Q969R5 705 aa18.05■□□□□ 0.48
TSC22D3-206ENST00000372397 HNRNPMP52272 730 aaKnown RBP eCLIP18.04■□□□□ 0.48
TSC22D3-206ENST00000372397 CDC42BPBQ9Y5S2 1711 aa18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 C9orf84Q5VXU9 1444 aa18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 SHANK2Q9UPX8 1470 aa18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 TSPY4P0CV99 314 aa18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 TSPY10P0CW01 314 aa18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
TSC22D3-206ENST00000372397 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.48
TSC22D3-206ENST00000372397 ABCC2Q92887 1545 aa18.02■□□□□ 0.48
TSC22D3-206ENST00000372397 ANKRD50Q9ULJ7 1429 aa18.02■□□□□ 0.47
TSC22D3-206ENST00000372397 PREX2Q70Z35 1606 aa18.01■□□□□ 0.47
TSC22D3-206ENST00000372397 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
TSC22D3-206ENST00000372397 MBD5Q9P267 1494 aa17.99■□□□□ 0.47
TSC22D3-206ENST00000372397 SAMD9LQ8IVG5 1584 aa17.99■□□□□ 0.47
TSC22D3-206ENST00000372397 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
TSC22D3-206ENST00000372397 KCNH8Q96L42 1107 aa17.97■□□□□ 0.47
TSC22D3-206ENST00000372397 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.97■□□□□ 0.47
TSC22D3-206ENST00000372397 KIAA1107Q9UPP5 1409 aa17.96■□□□□ 0.47
TSC22D3-206ENST00000372397 PKD2Q13563 968 aa17.96■□□□□ 0.47
TSC22D3-206ENST00000372397 HSPA5P11021 654 aaKnown RBP17.95■□□□□ 0.46
TSC22D3-206ENST00000372397 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
TSC22D3-206ENST00000372397 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
TSC22D3-206ENST00000372397 KIF15Q9NS87 1388 aa17.94■□□□□ 0.46
TSC22D3-206ENST00000372397 ARHGAP5Q13017 1502 aa17.94■□□□□ 0.46
TSC22D3-206ENST00000372397 RSPH4AQ5TD94 716 aa17.93■□□□□ 0.46
TSC22D3-206ENST00000372397 NUP155O75694 1391 aa17.93■□□□□ 0.46
TSC22D3-206ENST00000372397 EIF4G2P78344 907 aaKnown RBP eCLIP17.93■□□□□ 0.46
TSC22D3-206ENST00000372397 NBPF8Q3BBV2 869 aa17.93■□□□□ 0.46
TSC22D3-206ENST00000372397 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
TSC22D3-206ENST00000372397 MYO5CQ9NQX4 1742 aa17.92■□□□□ 0.46
TSC22D3-206ENST00000372397 UHRF1BP1LA0JNW5 1464 aa17.91■□□□□ 0.46
TSC22D3-206ENST00000372397 SYCP2Q9BX26 1530 aa17.9■□□□□ 0.46
TSC22D3-206ENST00000372397 ANP32CO43423 234 aa17.9■□□□□ 0.46
TSC22D3-206ENST00000372397 KDM5DQ9BY66 1539 aa17.88■□□□□ 0.45
TSC22D3-206ENST00000372397 WASHC2AQ641Q2 1341 aa17.87■□□□□ 0.45
TSC22D3-206ENST00000372397 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
TSC22D3-206ENST00000372397 MAST1Q9Y2H9 1570 aa17.85■□□□□ 0.45
TSC22D3-206ENST00000372397 PLEKHH2Q8IVE3 1493 aa17.84■□□□□ 0.45
TSC22D3-206ENST00000372397 PLCH2O75038 1416 aa17.84■□□□□ 0.45
TSC22D3-206ENST00000372397 ARHGEF12Q9NZN5 1544 aa17.81■□□□□ 0.44
TSC22D3-206ENST00000372397 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
TSC22D3-206ENST00000372397 C11orf95C9JLR9 678 aaPredicted RBP17.81■□□□□ 0.44
TSC22D3-206ENST00000372397 FAM135AQ9P2D6 1515 aa17.79■□□□□ 0.44
TSC22D3-206ENST00000372397 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
TSC22D3-206ENST00000372397 PLXNC1O60486 1568 aa17.78■□□□□ 0.44
TSC22D3-206ENST00000372397 ZNF326Q5BKZ1 582 aaKnown RBP17.78■□□□□ 0.44
TSC22D3-206ENST00000372397 CCDC7Q96M83 1385 aa17.77■□□□□ 0.44
TSC22D3-206ENST00000372397 UNC13BO14795 1591 aa17.76■□□□□ 0.43
TSC22D3-206ENST00000372397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.76■□□□□ 0.43
TSC22D3-206ENST00000372397 ABCC1P33527 1531 aa17.75■□□□□ 0.43
TSC22D3-206ENST00000372397 DUOX2Q9NRD8 1548 aa17.73■□□□□ 0.43
TSC22D3-206ENST00000372397 CNTLNQ9NXG0 1405 aa17.73■□□□□ 0.43
TSC22D3-206ENST00000372397 TRAPPC8Q9Y2L5 1435 aa17.73■□□□□ 0.43
TSC22D3-206ENST00000372397 UHRF1BP1Q6BDS2 1440 aa17.72■□□□□ 0.43
TSC22D3-206ENST00000372397 POLR1AO95602 1720 aaPredicted RBP17.72■□□□□ 0.43
TSC22D3-206ENST00000372397 WDR7Q9Y4E6 1490 aa17.72■□□□□ 0.43
TSC22D3-206ENST00000372397 KDM2AQ9Y2K7 1162 aa17.71■□□□□ 0.42
TSC22D3-206ENST00000372397 KIF7Q2M1P5 1343 aa17.7■□□□□ 0.42
TSC22D3-206ENST00000372397 ARAP3Q8WWN8 1544 aa17.7■□□□□ 0.42
TSC22D3-206ENST00000372397 USP47Q96K76 1375 aa17.7■□□□□ 0.42
TSC22D3-206ENST00000372397 IQGAP3Q86VI3 1631 aa17.7■□□□□ 0.42
TSC22D3-206ENST00000372397 DCAF11Q8TEB1 546 aa17.69■□□□□ 0.42
TSC22D3-206ENST00000372397 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
TSC22D3-206ENST00000372397 RALGAPBQ86X10 1494 aa17.68■□□□□ 0.42
TSC22D3-206ENST00000372397 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
TSC22D3-206ENST00000372397 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
TSC22D3-206ENST00000372397 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms