RNA–Protein interactions for RNA: ENST00000372384.6

TSC22D3-204, Transcript of TSC22 domain family member 3, humanhuman

TSL 2 BASIC

Gene TSC22D3, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-204ENST00000372384 PTPRKQ15262 1439 aa20.42■□□□□ 0.86
TSC22D3-204ENST00000372384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.4■□□□□ 0.86
TSC22D3-204ENST00000372384 PTPN23Q9H3S7 1636 aa20.39■□□□□ 0.85
TSC22D3-204ENST00000372384 KCNH8Q96L42 1107 aa20.39■□□□□ 0.85
TSC22D3-204ENST00000372384 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
TSC22D3-204ENST00000372384 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
TSC22D3-204ENST00000372384 TTC37Q6PGP7 1564 aa20.37■□□□□ 0.85
TSC22D3-204ENST00000372384 HFM1A2PYH4 1435 aa20.37■□□□□ 0.85
TSC22D3-204ENST00000372384 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
TSC22D3-204ENST00000372384 MIA2Q96PC5 1412 aa20.36■□□□□ 0.85
TSC22D3-204ENST00000372384 ABCA9Q8IUA7 1624 aa20.35■□□□□ 0.85
TSC22D3-204ENST00000372384 CDC42BPAQ5VT25 1732 aa20.34■□□□□ 0.85
TSC22D3-204ENST00000372384 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
TSC22D3-204ENST00000372384 PREX2Q70Z35 1606 aa20.32■□□□□ 0.84
TSC22D3-204ENST00000372384 SIN3AQ96ST3 1273 aa20.31■□□□□ 0.84
TSC22D3-204ENST00000372384 MYO5CQ9NQX4 1742 aa20.3■□□□□ 0.84
TSC22D3-204ENST00000372384 NAIPQ13075 1403 aa20.3■□□□□ 0.84
TSC22D3-204ENST00000372384 GLI2P10070 1586 aa20.3■□□□□ 0.84
TSC22D3-204ENST00000372384 PLCH2O75038 1416 aa20.29■□□□□ 0.84
TSC22D3-204ENST00000372384 ARAP3Q8WWN8 1544 aa20.29■□□□□ 0.84
TSC22D3-204ENST00000372384 CFDP1Q9UEE9 299 aaPredicted RBP20.29■□□□□ 0.84
TSC22D3-204ENST00000372384 CDC42BPBQ9Y5S2 1711 aa20.28■□□□□ 0.84
TSC22D3-204ENST00000372384 DIP2BQ9P265 1576 aa20.28■□□□□ 0.84
TSC22D3-204ENST00000372384 GCC2Q8IWJ2 1684 aa20.25■□□□□ 0.83
TSC22D3-204ENST00000372384 YTHDC1Q96MU7 727 aaKnown RBP20.25■□□□□ 0.83
TSC22D3-204ENST00000372384 ARHGAP5Q13017 1502 aa20.24■□□□□ 0.83
TSC22D3-204ENST00000372384 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
TSC22D3-204ENST00000372384 CD109Q6YHK3 1445 aa20.23■□□□□ 0.83
TSC22D3-204ENST00000372384 MAP3K4Q9Y6R4 1608 aa20.22■□□□□ 0.83
TSC22D3-204ENST00000372384 CAMSAP2Q08AD1 1489 aa20.22■□□□□ 0.83
TSC22D3-204ENST00000372384 TIMELESSQ9UNS1 1208 aa20.21■□□□□ 0.83
TSC22D3-204ENST00000372384 FAM69CQ0P6D2 419 aa20.21■□□□□ 0.83
TSC22D3-204ENST00000372384 EFCAB2Q5VUJ9 269 aa20.2■□□□□ 0.82
TSC22D3-204ENST00000372384 ZNF644Q9H582 1327 aaPredicted RBP20.2■□□□□ 0.82
TSC22D3-204ENST00000372384 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
TSC22D3-204ENST00000372384 SAMD9LQ8IVG5 1584 aa20.19■□□□□ 0.82
TSC22D3-204ENST00000372384 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
TSC22D3-204ENST00000372384 KIF13AQ9H1H9 1805 aa20.18■□□□□ 0.82
TSC22D3-204ENST00000372384 FANCAO15360 1455 aa20.17■□□□□ 0.82
TSC22D3-204ENST00000372384 PLEKHH2Q8IVE3 1493 aa20.17■□□□□ 0.82
TSC22D3-204ENST00000372384 ZNF777Q9ULD5 760 aaPredicted RBP20.17■□□□□ 0.82
TSC22D3-204ENST00000372384 KDM6BO15054 1643 aa20.16■□□□□ 0.82
TSC22D3-204ENST00000372384 KIAA1107Q9UPP5 1409 aa20.16■□□□□ 0.82
TSC22D3-204ENST00000372384 CFAP74Q9C0B2 1584 aa20.14■□□□□ 0.82
TSC22D3-204ENST00000372384 DNMT1P26358 1616 aaKnown RBP20.13■□□□□ 0.81
TSC22D3-204ENST00000372384 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
TSC22D3-204ENST00000372384 MBD5Q9P267 1494 aa20.13■□□□□ 0.81
TSC22D3-204ENST00000372384 ARHGEF5Q12774 1597 aa20.13■□□□□ 0.81
TSC22D3-204ENST00000372384 RRP7BPQ9NSQ0 103 aa20.12■□□□□ 0.81
TSC22D3-204ENST00000372384 ABCC1P33527 1531 aa20.12■□□□□ 0.81
TSC22D3-204ENST00000372384 DENND4BO75064 1496 aaPredicted RBP20.12■□□□□ 0.81
TSC22D3-204ENST00000372384 NEO1Q92859 1461 aa20.12■□□□□ 0.81
TSC22D3-204ENST00000372384 CHIC2Q9UKJ5 165 aa20.11■□□□□ 0.81
TSC22D3-204ENST00000372384 ABCC5O15440 1437 aa20.1■□□□□ 0.81
TSC22D3-204ENST00000372384 DAPK1P53355 1430 aa20.1■□□□□ 0.81
TSC22D3-204ENST00000372384 SYCP2Q9BX26 1530 aa20.1■□□□□ 0.81
TSC22D3-204ENST00000372384 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
TSC22D3-204ENST00000372384 PPRC1Q5VV67 1664 aaKnown RBP20.09■□□□□ 0.81
TSC22D3-204ENST00000372384 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.81
TSC22D3-204ENST00000372384 TONSLQ96HA7 1378 aa20.08■□□□□ 0.8
TSC22D3-204ENST00000372384 ADGRL1O94910 1474 aa20.08■□□□□ 0.8
TSC22D3-204ENST00000372384 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.8
TSC22D3-204ENST00000372384 HNRNPMP52272 730 aaKnown RBP eCLIP20.07■□□□□ 0.8
TSC22D3-204ENST00000372384 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
TSC22D3-204ENST00000372384 CROCC2H7BZ55 1655 aa20.06■□□□□ 0.8
TSC22D3-204ENST00000372384 SHANK2Q9UPX8 1470 aa20.06■□□□□ 0.8
TSC22D3-204ENST00000372384 TSPOAP1O95153 1857 aa20.05■□□□□ 0.8
TSC22D3-204ENST00000372384 SCAPERQ9BY12 1400 aa20.04■□□□□ 0.8
TSC22D3-204ENST00000372384 ROCK1Q13464 1354 aa20.03■□□□□ 0.8
TSC22D3-204ENST00000372384 TRAPPC8Q9Y2L5 1435 aa20.02■□□□□ 0.8
TSC22D3-204ENST00000372384 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
TSC22D3-204ENST00000372384 ADGRL2O95490 1459 aa20■□□□□ 0.79
TSC22D3-204ENST00000372384 C9orf84Q5VXU9 1444 aa20■□□□□ 0.79
TSC22D3-204ENST00000372384 TSPY4P0CV99 314 aa20■□□□□ 0.79
TSC22D3-204ENST00000372384 TSPY10P0CW01 314 aa20■□□□□ 0.79
TSC22D3-204ENST00000372384 TRHP20396 242 aaPredicted RBP19.99■□□□□ 0.79
TSC22D3-204ENST00000372384 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
TSC22D3-204ENST00000372384 ZNF518AQ6AHZ1 1483 aa19.98■□□□□ 0.79
TSC22D3-204ENST00000372384 ADGBQ8N7X0 1667 aa19.98■□□□□ 0.79
TSC22D3-204ENST00000372384 AFAP1Q8N556 730 aa19.96■□□□□ 0.79
TSC22D3-204ENST00000372384 NCOA1Q15788 1441 aa19.96■□□□□ 0.79
TSC22D3-204ENST00000372384 TRIM52Q96A61 297 aa19.95■□□□□ 0.78
TSC22D3-204ENST00000372384 KDM5CP41229 1560 aa19.95■□□□□ 0.78
TSC22D3-204ENST00000372384 ANKRD30AQ9BXX3 1397 aa19.95■□□□□ 0.78
TSC22D3-204ENST00000372384 HIRIP3Q9BW71 556 aaPredicted RBP19.95■□□□□ 0.78
TSC22D3-204ENST00000372384 RTEL1-TNFRSF6BF6WH68 1400 aa19.95■□□□□ 0.78
TSC22D3-204ENST00000372384 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
TSC22D3-204ENST00000372384 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
TSC22D3-204ENST00000372384 RICTORQ6R327 1708 aa19.93■□□□□ 0.78
TSC22D3-204ENST00000372384 SPAG9O60271 1321 aaKnown RBP19.92■□□□□ 0.78
TSC22D3-204ENST00000372384 ZFYVE16Q7Z3T8 1539 aa19.92■□□□□ 0.78
TSC22D3-204ENST00000372384 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
TSC22D3-204ENST00000372384 INO80Q9ULG1 1556 aaPredicted RBP19.92■□□□□ 0.78
TSC22D3-204ENST00000372384 MLH3Q9UHC1 1453 aa19.9■□□□□ 0.78
TSC22D3-204ENST00000372384 ATP7AQ04656 1500 aa19.89■□□□□ 0.78
TSC22D3-204ENST00000372384 FRMPD1Q5SYB0 1578 aa19.89■□□□□ 0.78
TSC22D3-204ENST00000372384 RAPGEF3O95398 923 aa19.88■□□□□ 0.77
TSC22D3-204ENST00000372384 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
TSC22D3-204ENST00000372384 HECW2Q9P2P5 1572 aa19.87■□□□□ 0.77
TSC22D3-204ENST00000372384 ZMYM4Q5VZL5 1548 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms