RNA–Protein interactions for RNA: ENST00000372247.6

RNF220-204, Transcript of ring finger protein 220, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF220, Length 3,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-204ENST00000372247 ITSN2Q9NZM3 1697 aa19.3■□□□□ 0.68
RNF220-204ENST00000372247 ADGRL2O95490 1459 aa19.3■□□□□ 0.68
RNF220-204ENST00000372247 MBD5Q9P267 1494 aa19.3■□□□□ 0.68
RNF220-204ENST00000372247 ERICH6BQ5W0A0 696 aa19.29■□□□□ 0.68
RNF220-204ENST00000372247 HIRIP3Q9BW71 556 aaPredicted RBP19.29■□□□□ 0.68
RNF220-204ENST00000372247 MPHOSPH9Q99550 1183 aa19.29■□□□□ 0.68
RNF220-204ENST00000372247 HSPA5P11021 654 aaKnown RBP19.28■□□□□ 0.68
RNF220-204ENST00000372247 NEFLP07196 543 aa19.27■□□□□ 0.67
RNF220-204ENST00000372247 EIF4G2P78344 907 aaKnown RBP eCLIP19.25■□□□□ 0.67
RNF220-204ENST00000372247 CCDC7Q96M83 1385 aa19.25■□□□□ 0.67
RNF220-204ENST00000372247 ANP32EQ9BTT0 268 aa19.24■□□□□ 0.67
RNF220-204ENST00000372247 PZPP20742 1482 aa19.24■□□□□ 0.67
RNF220-204ENST00000372247 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
RNF220-204ENST00000372247 RRP7BPQ9NSQ0 103 aa19.24■□□□□ 0.67
RNF220-204ENST00000372247 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
RNF220-204ENST00000372247 TROQ12816 1431 aaPredicted RBP19.21■□□□□ 0.67
RNF220-204ENST00000372247 EIF4G3O43432 1585 aaKnown RBP19.2■□□□□ 0.66
RNF220-204ENST00000372247 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
RNF220-204ENST00000372247 KIF14Q15058 1648 aa19.18■□□□□ 0.66
RNF220-204ENST00000372247 KDM5DQ9BY66 1539 aa19.18■□□□□ 0.66
RNF220-204ENST00000372247 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
RNF220-204ENST00000372247 CAMSAP2Q08AD1 1489 aa19.18■□□□□ 0.66
RNF220-204ENST00000372247 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
RNF220-204ENST00000372247 SHANK2Q9UPX8 1470 aa19.16■□□□□ 0.66
RNF220-204ENST00000372247 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
RNF220-204ENST00000372247 GPATCH8Q9UKJ3 1502 aaKnown RBP19.15■□□□□ 0.66
RNF220-204ENST00000372247 PRKRIP1Q9H875 184 aaPredicted RBP19.14■□□□□ 0.66
RNF220-204ENST00000372247 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.66
RNF220-204ENST00000372247 UHRF1BP1Q6BDS2 1440 aa19.14■□□□□ 0.65
RNF220-204ENST00000372247 RBM19Q9Y4C8 960 aaKnown RBP19.14■□□□□ 0.65
RNF220-204ENST00000372247 CEP170Q5SW79 1584 aa19.12■□□□□ 0.65
RNF220-204ENST00000372247 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
RNF220-204ENST00000372247 BCANQ96GW7 911 aa19.12■□□□□ 0.65
RNF220-204ENST00000372247 KDM5CP41229 1560 aa19.12■□□□□ 0.65
RNF220-204ENST00000372247 NBPF8Q3BBV2 869 aa19.12■□□□□ 0.65
RNF220-204ENST00000372247 KIAA1107Q9UPP5 1409 aa19.12■□□□□ 0.65
RNF220-204ENST00000372247 C11orf95C9JLR9 678 aaPredicted RBP19.11■□□□□ 0.65
RNF220-204ENST00000372247 ZBED9Q6R2W3 1325 aa19.11■□□□□ 0.65
RNF220-204ENST00000372247 ARHGEF12Q9NZN5 1544 aa19.11■□□□□ 0.65
RNF220-204ENST00000372247 CDC42BPAQ5VT25 1732 aa19.1■□□□□ 0.65
RNF220-204ENST00000372247 NUP160Q12769 1436 aa19.09■□□□□ 0.65
RNF220-204ENST00000372247 CDK11AQ9UQ88 783 aaPredicted RBP19.09■□□□□ 0.65
RNF220-204ENST00000372247 HNRNPUQ00839 825 aaKnown RBP eCLIP19.09■□□□□ 0.65
RNF220-204ENST00000372247 ABCA8O94911 1581 aa19.08■□□□□ 0.65
RNF220-204ENST00000372247 BCORL1Q5H9F3 1711 aa19.08■□□□□ 0.65
RNF220-204ENST00000372247 SYNJ2O15056 1496 aa19.08■□□□□ 0.64
RNF220-204ENST00000372247 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.64
RNF220-204ENST00000372247 ABCC10Q5T3U5 1492 aa19.07■□□□□ 0.64
RNF220-204ENST00000372247 KIF7Q2M1P5 1343 aa19.07■□□□□ 0.64
RNF220-204ENST00000372247 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
RNF220-204ENST00000372247 RALGAPBQ86X10 1494 aa19.05■□□□□ 0.64
RNF220-204ENST00000372247 ARHGEF5Q12774 1597 aa19.05■□□□□ 0.64
RNF220-204ENST00000372247 PTPRGP23470 1445 aa19.05■□□□□ 0.64
RNF220-204ENST00000372247 PRG4Q92954 1404 aaPredicted RBP19.05■□□□□ 0.64
RNF220-204ENST00000372247 E9PCH4 1651 aa19.02■□□□□ 0.64
RNF220-204ENST00000372247 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.63
RNF220-204ENST00000372247 CCDC184Q52MB2 194 aa19.02■□□□□ 0.63
RNF220-204ENST00000372247 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
RNF220-204ENST00000372247 PLB1Q6P1J6 1458 aa19■□□□□ 0.63
RNF220-204ENST00000372247 ANKRD30AQ9BXX3 1397 aa19■□□□□ 0.63
RNF220-204ENST00000372247 PPP4R2Q9NY27 417 aa19■□□□□ 0.63
RNF220-204ENST00000372247 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
RNF220-204ENST00000372247 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
RNF220-204ENST00000372247 FOXD1Q16676 465 aa18.98■□□□□ 0.63
RNF220-204ENST00000372247 ROCK2O75116 1388 aaKnown RBP18.98■□□□□ 0.63
RNF220-204ENST00000372247 CARMIL2Q6F5E8 1435 aa18.97■□□□□ 0.63
RNF220-204ENST00000372247 ANKRD50Q9ULJ7 1429 aa18.96■□□□□ 0.63
RNF220-204ENST00000372247 KTN1Q86UP2 1357 aaKnown RBP18.94■□□□□ 0.62
RNF220-204ENST00000372247 USP47Q96K76 1375 aa18.94■□□□□ 0.62
RNF220-204ENST00000372247 LAMC1P11047 1609 aa18.93■□□□□ 0.62
RNF220-204ENST00000372247 CFDP1Q9UEE9 299 aaPredicted RBP18.93■□□□□ 0.62
RNF220-204ENST00000372247 MAST1Q9Y2H9 1570 aa18.92■□□□□ 0.62
RNF220-204ENST00000372247 MRS2Q9HD23 443 aa18.92■□□□□ 0.62
RNF220-204ENST00000372247 C9orf84Q5VXU9 1444 aa18.91■□□□□ 0.62
RNF220-204ENST00000372247 ATP10BO94823 1461 aa18.91■□□□□ 0.62
RNF220-204ENST00000372247 PREX2Q70Z35 1606 aa18.89■□□□□ 0.62
RNF220-204ENST00000372247 MSH5O43196 834 aa18.88■□□□□ 0.61
RNF220-204ENST00000372247 UNC13BO14795 1591 aa18.88■□□□□ 0.61
RNF220-204ENST00000372247 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
RNF220-204ENST00000372247 TRPM1Q7Z4N2 1603 aa18.86■□□□□ 0.61
RNF220-204ENST00000372247 ZMYM4Q5VZL5 1548 aa18.86■□□□□ 0.61
RNF220-204ENST00000372247 CDC42BPBQ9Y5S2 1711 aa18.84■□□□□ 0.61
RNF220-204ENST00000372247 PKD2Q13563 968 aa18.84■□□□□ 0.61
RNF220-204ENST00000372247 INSRP06213 1382 aa18.84■□□□□ 0.61
RNF220-204ENST00000372247 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.61
RNF220-204ENST00000372247 PLXNC1O60486 1568 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 CCDC141Q6ZP82 1450 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 BRD4O60885 1362 aaPredicted RBP18.81■□□□□ 0.6
RNF220-204ENST00000372247 GPRASP1Q5JY77 1395 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 ARID3CA6NKF2 412 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 FAM9BQ8IZU0 186 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 JPH4Q96JJ6 628 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
RNF220-204ENST00000372247 FAM135AQ9P2D6 1515 aa18.8■□□□□ 0.6
RNF220-204ENST00000372247 PNISRQ8TF01 805 aaKnown RBP18.79■□□□□ 0.6
RNF220-204ENST00000372247 ATP10AO60312 1499 aa18.79■□□□□ 0.6
RNF220-204ENST00000372247 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
RNF220-204ENST00000372247 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
RNF220-204ENST00000372247 NUP155O75694 1391 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms