RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ADCY10Q96PN6 1610 aa29.41■■■□□ 2.3
VEGFA-204ENST00000372064 TRIM52Q96A61 297 aa29.4■■■□□ 2.3
VEGFA-204ENST00000372064 ABCC5O15440 1437 aa29.39■■■□□ 2.3
VEGFA-204ENST00000372064 ITSN2Q9NZM3 1697 aa29.36■■■□□ 2.29
VEGFA-204ENST00000372064 HIRIP3Q9BW71 556 aaPredicted RBP29.33■■■□□ 2.29
VEGFA-204ENST00000372064 ABCA8O94911 1581 aa29.31■■■□□ 2.28
VEGFA-204ENST00000372064 DDX10Q13206 875 aaKnown RBP29.3■■■□□ 2.28
VEGFA-204ENST00000372064 KIF14Q15058 1648 aa29.29■■■□□ 2.28
VEGFA-204ENST00000372064 GPATCH8Q9UKJ3 1502 aaKnown RBP29.29■■■□□ 2.28
VEGFA-204ENST00000372064 MPHOSPH9Q99550 1183 aa29.28■■■□□ 2.28
VEGFA-204ENST00000372064 CAMSAP2Q08AD1 1489 aa29.28■■■□□ 2.28
VEGFA-204ENST00000372064 CFDP1Q9UEE9 299 aaPredicted RBP29.28■■■□□ 2.28
VEGFA-204ENST00000372064 ADGBQ8N7X0 1667 aa29.22■■■□□ 2.27
VEGFA-204ENST00000372064 CROCC2H7BZ55 1655 aa29.21■■■□□ 2.27
VEGFA-204ENST00000372064 ZNF777Q9ULD5 760 aaPredicted RBP29.2■■■□□ 2.27
VEGFA-204ENST00000372064 FOXD1Q16676 465 aa29.2■■■□□ 2.26
VEGFA-204ENST00000372064 ATP10BO94823 1461 aa29.19■■■□□ 2.26
VEGFA-204ENST00000372064 PLEKHD1A6NEE1 506 aa29.18■■■□□ 2.26
VEGFA-204ENST00000372064 PELP1Q8IZL8 1130 aaKnown RBP29.18■■■□□ 2.26
VEGFA-204ENST00000372064 ADGRL2O95490 1459 aa29.18■■■□□ 2.26
VEGFA-204ENST00000372064 ANKRD30BQ9BXX2 1392 aa29.15■■■□□ 2.26
VEGFA-204ENST00000372064 ABCC10Q5T3U5 1492 aa29.15■■■□□ 2.26
VEGFA-204ENST00000372064 NCOA1Q15788 1441 aa29.15■■■□□ 2.26
VEGFA-204ENST00000372064 KCNH8Q96L42 1107 aa29.14■■■□□ 2.26
VEGFA-204ENST00000372064 CDC42BPAQ5VT25 1732 aa29.13■■■□□ 2.25
VEGFA-204ENST00000372064 RPRD2Q5VT52 1461 aaKnown RBP29.12■■■□□ 2.25
VEGFA-204ENST00000372064 PTPRGP23470 1445 aa29.11■■■□□ 2.25
VEGFA-204ENST00000372064 SLC4A1APQ9BWU0 796 aaKnown RBP29.08■■■□□ 2.25
VEGFA-204ENST00000372064 PZPP20742 1482 aa29.07■■■□□ 2.24
VEGFA-204ENST00000372064 CHD1O14646 1710 aa29.07■■■□□ 2.24
VEGFA-204ENST00000372064 L3MBTL2Q969R5 705 aa29.06■■■□□ 2.24
VEGFA-204ENST00000372064 CCER2I3L3R5 266 aa29.05■■■□□ 2.24
VEGFA-204ENST00000372064 TEX14Q8IWB6 1497 aa29.05■■■□□ 2.24
VEGFA-204ENST00000372064 SHANK2Q9UPX8 1470 aa29.04■■■□□ 2.24
VEGFA-204ENST00000372064 ANKRD30AQ9BXX3 1397 aa29.02■■■□□ 2.24
VEGFA-204ENST00000372064 SHROOM2Q13796 1616 aa29.01■■■□□ 2.24
VEGFA-204ENST00000372064 ANP32CO43423 234 aa29.01■■■□□ 2.23
VEGFA-204ENST00000372064 HSPA5P11021 654 aaKnown RBP28.97■■■□□ 2.23
VEGFA-204ENST00000372064 ARHGEF5Q12774 1597 aa28.94■■■□□ 2.22
VEGFA-204ENST00000372064 EIF4G2P78344 907 aaKnown RBP eCLIP28.93■■■□□ 2.22
VEGFA-204ENST00000372064 C9orf84Q5VXU9 1444 aa28.93■■■□□ 2.22
VEGFA-204ENST00000372064 ANKRD50Q9ULJ7 1429 aa28.93■■■□□ 2.22
VEGFA-204ENST00000372064 KIAA1107Q9UPP5 1409 aa28.92■■■□□ 2.22
VEGFA-204ENST00000372064 WASHC2AQ641Q2 1341 aa28.9■■■□□ 2.22
VEGFA-204ENST00000372064 PREX2Q70Z35 1606 aa28.89■■■□□ 2.22
VEGFA-204ENST00000372064 HNRNPMP52272 730 aaKnown RBP eCLIP28.88■■■□□ 2.211e-12■■■■■ 34.3
VEGFA-204ENST00000372064 NBPF8Q3BBV2 869 aa28.88■■■□□ 2.21
VEGFA-204ENST00000372064 TSPY4P0CV99 314 aa28.87■■■□□ 2.21
VEGFA-204ENST00000372064 TSPY10P0CW01 314 aa28.87■■■□□ 2.21
VEGFA-204ENST00000372064 ERCC6L2Q5T890 1561 aa28.87■■■□□ 2.21
VEGFA-204ENST00000372064 KDM5DQ9BY66 1539 aa28.87■■■□□ 2.21
VEGFA-204ENST00000372064 MBD5Q9P267 1494 aa28.86■■■□□ 2.21
VEGFA-204ENST00000372064 CDC42BPBQ9Y5S2 1711 aa28.86■■■□□ 2.21
VEGFA-204ENST00000372064 PKD2Q13563 968 aa28.85■■■□□ 2.21
VEGFA-204ENST00000372064 SAMD9LQ8IVG5 1584 aa28.84■■■□□ 2.21
VEGFA-204ENST00000372064 SUPT16HQ9Y5B9 1047 aaKnown RBP28.82■■■□□ 2.2
VEGFA-204ENST00000372064 SPATA31E1Q6ZUB1 1445 aa28.81■■■□□ 2.2
VEGFA-204ENST00000372064 NUP155O75694 1391 aa28.79■■■□□ 2.2
VEGFA-204ENST00000372064 CCDC141Q6ZP82 1450 aa28.78■■■□□ 2.2
VEGFA-204ENST00000372064 ABCC2Q92887 1545 aa28.78■■■□□ 2.2
VEGFA-204ENST00000372064 KIF15Q9NS87 1388 aa28.78■■■□□ 2.2
VEGFA-204ENST00000372064 CNTLNQ9NXG0 1405 aa28.77■■■□□ 2.2
VEGFA-204ENST00000372064 POLR1AO95602 1720 aaPredicted RBP28.77■■■□□ 2.2
VEGFA-204ENST00000372064 CCDC7Q96M83 1385 aa28.75■■■□□ 2.19
VEGFA-204ENST00000372064 TTC37Q6PGP7 1564 aa28.74■■■□□ 2.19
VEGFA-204ENST00000372064 C11orf95C9JLR9 678 aaPredicted RBP28.73■■■□□ 2.19
VEGFA-204ENST00000372064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.73■■■□□ 2.192e-6■■□□□ 11.9
VEGFA-204ENST00000372064 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
VEGFA-204ENST00000372064 MAST1Q9Y2H9 1570 aa28.71■■■□□ 2.19
VEGFA-204ENST00000372064 CLASP1Q7Z460 1538 aa28.7■■■□□ 2.18
VEGFA-204ENST00000372064 ARHGAP5Q13017 1502 aa28.68■■■□□ 2.18
VEGFA-204ENST00000372064 SYCP2Q9BX26 1530 aa28.67■■■□□ 2.18
VEGFA-204ENST00000372064 ARHGEF12Q9NZN5 1544 aa28.66■■■□□ 2.18
VEGFA-204ENST00000372064 UHRF1BP1Q6BDS2 1440 aa28.66■■■□□ 2.18
VEGFA-204ENST00000372064 MYO5CQ9NQX4 1742 aa28.66■■■□□ 2.18
VEGFA-204ENST00000372064 ZNF326Q5BKZ1 582 aaKnown RBP28.62■■■□□ 2.17
VEGFA-204ENST00000372064 UHRF1BP1LA0JNW5 1464 aa28.61■■■□□ 2.17
VEGFA-204ENST00000372064 KIF7Q2M1P5 1343 aa28.61■■■□□ 2.17
VEGFA-204ENST00000372064 PLEKHH2Q8IVE3 1493 aa28.61■■■□□ 2.17
VEGFA-204ENST00000372064 FAM135AQ9P2D6 1515 aa28.6■■■□□ 2.17
VEGFA-204ENST00000372064 PLXNC1O60486 1568 aa28.59■■■□□ 2.17
VEGFA-204ENST00000372064 UNC13BO14795 1591 aa28.59■■■□□ 2.17
VEGFA-204ENST00000372064 KDM5CP41229 1560 aa28.59■■■□□ 2.17
VEGFA-204ENST00000372064 ZCCHC11Q5TAX3 1644 aaKnown RBP28.58■■■□□ 2.17
VEGFA-204ENST00000372064 RALGAPBQ86X10 1494 aa28.58■■■□□ 2.17
VEGFA-204ENST00000372064 USP47Q96K76 1375 aa28.55■■■□□ 2.16
VEGFA-204ENST00000372064 BCORL1Q5H9F3 1711 aa28.53■■■□□ 2.16
VEGFA-204ENST00000372064 PRKRIP1Q9H875 184 aaPredicted RBP28.53■■■□□ 2.16
VEGFA-204ENST00000372064 PLCH2O75038 1416 aa28.51■■■□□ 2.15
VEGFA-204ENST00000372064 ARID4BQ4LE39 1312 aaPredicted RBP28.48■■■□□ 2.15
VEGFA-204ENST00000372064 IQGAP3Q86VI3 1631 aa28.47■■■□□ 2.15
VEGFA-204ENST00000372064 DUOX2Q9NRD8 1548 aa28.46■■■□□ 2.15
VEGFA-204ENST00000372064 EFCAB2Q5VUJ9 269 aa28.46■■■□□ 2.15
VEGFA-204ENST00000372064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.46■■■□□ 2.151e-12■■□□□ 14.3
VEGFA-204ENST00000372064 KDM2AQ9Y2K7 1162 aa28.46■■■□□ 2.15
VEGFA-204ENST00000372064 MAGI2Q86UL8 1455 aa28.44■■■□□ 2.14
VEGFA-204ENST00000372064 CCDC184Q52MB2 194 aa28.43■■■□□ 2.14
VEGFA-204ENST00000372064 ABCC1P33527 1531 aa28.43■■■□□ 2.14
VEGFA-204ENST00000372064 DCAF11Q8TEB1 546 aa28.43■■■□□ 2.14
VEGFA-204ENST00000372064 ERBINQ96RT1 1412 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms