RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 DNMT1P26358 1616 aaKnown RBP39.09■■■■□ 3.85
ATPAF1-202ENST00000371937 HFM1A2PYH4 1435 aa39.08■■■■□ 3.85
ATPAF1-202ENST00000371937 DAPK1P53355 1430 aa39.08■■■■□ 3.85
ATPAF1-202ENST00000371937 RIMBP3CA6NJZ7 1639 aa39.07■■■■□ 3.84
ATPAF1-202ENST00000371937 RIMBP3BA6NNM3 1639 aa39.07■■■■□ 3.84
ATPAF1-202ENST00000371937 RIMBP3Q9UFD9 1639 aa39.07■■■■□ 3.84
ATPAF1-202ENST00000371937 ABCC5O15440 1437 aa39.04■■■■□ 3.84
ATPAF1-202ENST00000371937 CDC42BPBQ9Y5S2 1711 aa39.03■■■■□ 3.84
ATPAF1-202ENST00000371937 ASXL2Q76L83 1435 aa39.02■■■■□ 3.84
ATPAF1-202ENST00000371937 MYO5CQ9NQX4 1742 aa39.02■■■■□ 3.84
ATPAF1-202ENST00000371937 AKNAQ7Z591 1439 aa39.02■■■■□ 3.84
ATPAF1-202ENST00000371937 CHIC2Q9UKJ5 165 aa38.98■■■■□ 3.83
ATPAF1-202ENST00000371937 NAIPQ13075 1403 aa38.97■■■■□ 3.83
ATPAF1-202ENST00000371937 ARHGAP5Q13017 1502 aa38.97■■■■□ 3.83
ATPAF1-202ENST00000371937 DHX57Q6P158 1386 aaKnown RBP38.97■■■■□ 3.83
ATPAF1-202ENST00000371937 ROCK1Q13464 1354 aa38.96■■■■□ 3.83
ATPAF1-202ENST00000371937 PLCH2O75038 1416 aa38.96■■■■□ 3.83
ATPAF1-202ENST00000371937 CYB5RLQ6IPT4 315 aa38.95■■■■□ 3.83
ATPAF1-202ENST00000371937 CLSPNQ9HAW4 1339 aa38.91■■■■□ 3.82
ATPAF1-202ENST00000371937 SAMD9LQ8IVG5 1584 aa38.9■■■■□ 3.82
ATPAF1-202ENST00000371937 RRP7BPQ9NSQ0 103 aa38.89■■■■□ 3.82
ATPAF1-202ENST00000371937 GCC2Q8IWJ2 1684 aa38.88■■■■□ 3.81
ATPAF1-202ENST00000371937 CROCC2H7BZ55 1655 aa38.87■■■■□ 3.81
ATPAF1-202ENST00000371937 ARAP3Q8WWN8 1544 aa38.87■■■■□ 3.81
ATPAF1-202ENST00000371937 ARHGEF5Q12774 1597 aa38.87■■■■□ 3.81
ATPAF1-202ENST00000371937 ABCA9Q8IUA7 1624 aa38.87■■■■□ 3.81
ATPAF1-202ENST00000371937 PLEKHH2Q8IVE3 1493 aa38.87■■■■□ 3.81
ATPAF1-202ENST00000371937 RSPH4AQ5TD94 716 aa38.86■■■■□ 3.81
ATPAF1-202ENST00000371937 EFCAB2Q5VUJ9 269 aa38.86■■■■□ 3.81
ATPAF1-202ENST00000371937 MBD5Q9P267 1494 aa38.83■■■■□ 3.81
ATPAF1-202ENST00000371937 SHANK2Q9UPX8 1470 aa38.83■■■■□ 3.81
ATPAF1-202ENST00000371937 KIAA1107Q9UPP5 1409 aa38.81■■■■□ 3.8
ATPAF1-202ENST00000371937 HNRNPMP52272 730 aaKnown RBP eCLIP38.81■■■■□ 3.8
ATPAF1-202ENST00000371937 ADGRL2O95490 1459 aa38.8■■■■□ 3.8
ATPAF1-202ENST00000371937 ADGBQ8N7X0 1667 aa38.8■■■■□ 3.8
ATPAF1-202ENST00000371937 TSPY4P0CV99 314 aa38.79■■■■□ 3.8
ATPAF1-202ENST00000371937 TSPY10P0CW01 314 aa38.79■■■■□ 3.8
ATPAF1-202ENST00000371937 CCDC141Q6ZP82 1450 aa38.77■■■■□ 3.8
ATPAF1-202ENST00000371937 NCOA1Q15788 1441 aa38.76■■■■□ 3.8
ATPAF1-202ENST00000371937 ACIN1Q9UKV3 1341 aaKnown RBP38.76■■■■□ 3.79
ATPAF1-202ENST00000371937 MAPKBP1O60336 1514 aa38.76■■■■□ 3.79
ATPAF1-202ENST00000371937 ANKRD30AQ9BXX3 1397 aa38.75■■■■□ 3.79
ATPAF1-202ENST00000371937 SYCP2Q9BX26 1530 aa38.74■■■■□ 3.79
ATPAF1-202ENST00000371937 C9orf84Q5VXU9 1444 aa38.74■■■■□ 3.79
ATPAF1-202ENST00000371937 ABCC1P33527 1531 aa38.66■■■■□ 3.78
ATPAF1-202ENST00000371937 FANCAO15360 1455 aa38.65■■■■□ 3.78
ATPAF1-202ENST00000371937 KDM6BO15054 1643 aa38.62■■■■□ 3.77
ATPAF1-202ENST00000371937 ARHGEF12Q9NZN5 1544 aa38.61■■■■□ 3.77
ATPAF1-202ENST00000371937 MAST1Q9Y2H9 1570 aa38.61■■■■□ 3.77
ATPAF1-202ENST00000371937 CD109Q6YHK3 1445 aa38.59■■■■□ 3.77
ATPAF1-202ENST00000371937 TRIM52Q96A61 297 aa38.53■■■■□ 3.76
ATPAF1-202ENST00000371937 KIF15Q9NS87 1388 aa38.52■■■■□ 3.76
ATPAF1-202ENST00000371937 ANKRD50Q9ULJ7 1429 aa38.52■■■■□ 3.76
ATPAF1-202ENST00000371937 CFAP74Q9C0B2 1584 aa38.49■■■■□ 3.75
ATPAF1-202ENST00000371937 TRAPPC8Q9Y2L5 1435 aa38.49■■■■□ 3.75
ATPAF1-202ENST00000371937 ADGRL1O94910 1474 aa38.48■■■■□ 3.75
ATPAF1-202ENST00000371937 GLI2P10070 1586 aa38.47■■■■□ 3.75
ATPAF1-202ENST00000371937 PLXNC1O60486 1568 aa38.45■■■■□ 3.75
ATPAF1-202ENST00000371937 SCAPERQ9BY12 1400 aa38.43■■■■□ 3.74
ATPAF1-202ENST00000371937 RTEL1-TNFRSF6BF6WH68 1400 aa38.4■■■■□ 3.74
ATPAF1-202ENST00000371937 SPAG9O60271 1321 aaKnown RBP38.39■■■■□ 3.74
ATPAF1-202ENST00000371937 MPHOSPH9Q99550 1183 aa38.38■■■■□ 3.73
ATPAF1-202ENST00000371937 MAP3K4Q9Y6R4 1608 aa38.38■■■■□ 3.73
ATPAF1-202ENST00000371937 AFAP1Q8N556 730 aa38.38■■■■□ 3.73
ATPAF1-202ENST00000371937 NEO1Q92859 1461 aa38.36■■■■□ 3.73
ATPAF1-202ENST00000371937 DIP2BQ9P265 1576 aa38.33■■■■□ 3.73
ATPAF1-202ENST00000371937 DUOX2Q9NRD8 1548 aa38.32■■■■□ 3.72
ATPAF1-202ENST00000371937 FAM69CQ0P6D2 419 aa38.31■■■■□ 3.72
ATPAF1-202ENST00000371937 ZFYVE16Q7Z3T8 1539 aa38.29■■■■□ 3.72
ATPAF1-202ENST00000371937 ZNF518AQ6AHZ1 1483 aa38.29■■■■□ 3.72
ATPAF1-202ENST00000371937 DENND4BO75064 1496 aaPredicted RBP38.28■■■■□ 3.72
ATPAF1-202ENST00000371937 SLC4A1APQ9BWU0 796 aaKnown RBP38.27■■■■□ 3.72
ATPAF1-202ENST00000371937 SIN3AQ96ST3 1273 aa38.25■■■■□ 3.71
ATPAF1-202ENST00000371937 INO80Q9ULG1 1556 aaPredicted RBP38.25■■■■□ 3.71
ATPAF1-202ENST00000371937 ERBINQ96RT1 1412 aa38.24■■■■□ 3.71
ATPAF1-202ENST00000371937 ATP7AQ04656 1500 aa38.24■■■■□ 3.71
ATPAF1-202ENST00000371937 TIMELESSQ9UNS1 1208 aa38.24■■■■□ 3.71
ATPAF1-202ENST00000371937 PZPP20742 1482 aa38.23■■■■□ 3.71
ATPAF1-202ENST00000371937 KDM5DQ9BY66 1539 aa38.21■■■■□ 3.71
ATPAF1-202ENST00000371937 POGZQ7Z3K3 1410 aa38.21■■■■□ 3.71
ATPAF1-202ENST00000371937 NUP155O75694 1391 aa38.21■■■■□ 3.71
ATPAF1-202ENST00000371937 NEUROD1Q13562 356 aa38.21■■■■□ 3.71
ATPAF1-202ENST00000371937 MYT1LQ9UL68 1186 aa38.16■■■■□ 3.7
ATPAF1-202ENST00000371937 KDM5CP41229 1560 aa38.15■■■■□ 3.7
ATPAF1-202ENST00000371937 UNC13BO14795 1591 aa38.12■■■■□ 3.69
ATPAF1-202ENST00000371937 TEX14Q8IWB6 1497 aa38.09■■■■□ 3.69
ATPAF1-202ENST00000371937 MLH3Q9UHC1 1453 aa38.09■■■■□ 3.69
ATPAF1-202ENST00000371937 KIDINS220Q9ULH0 1771 aa38.08■■■■□ 3.69
ATPAF1-202ENST00000371937 ANKRD30BQ9BXX2 1392 aa38.08■■■■□ 3.69
ATPAF1-202ENST00000371937 FOXD1Q16676 465 aa38.07■■■■□ 3.68
ATPAF1-202ENST00000371937 PKD2Q13563 968 aa38.05■■■■□ 3.68
ATPAF1-202ENST00000371937 HECW2Q9P2P5 1572 aa38.04■■■■□ 3.68
ATPAF1-202ENST00000371937 DHX29Q7Z478 1369 aaKnown RBP38.03■■■■□ 3.68
ATPAF1-202ENST00000371937 TONSLQ96HA7 1378 aa38.03■■■■□ 3.68
ATPAF1-202ENST00000371937 KIF13AQ9H1H9 1805 aa38.03■■■■□ 3.68
ATPAF1-202ENST00000371937 FAM135AQ9P2D6 1515 aa38.02■■■■□ 3.68
ATPAF1-202ENST00000371937 MAGI2Q86UL8 1455 aa38.02■■■■□ 3.68
ATPAF1-202ENST00000371937 PPRC1Q5VV67 1664 aaKnown RBP38.01■■■■□ 3.68
ATPAF1-202ENST00000371937 TSPOAP1O95153 1857 aa38.01■■■■□ 3.67
ATPAF1-202ENST00000371937 RAPGEF3O95398 923 aa38■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms