RNA–Protein interactions for RNA: ENST00000371720.5

PMPCA-202, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 4

Gene PMPCA, Length 713 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-202ENST00000371720 ITSN2Q9NZM3 1697 aa33.77■■■■□ 3
PMPCA-202ENST00000371720 FRMPD1Q5SYB0 1578 aa33.77■■■■□ 3
PMPCA-202ENST00000371720 LRRC9Q6ZRR7 1453 aa33.77■■■■□ 3
PMPCA-202ENST00000371720 AEBP2Q6ZN18 517 aaPredicted RBP33.77■■■■□ 3
PMPCA-202ENST00000371720 ARHGAP5Q13017 1502 aa33.77■■■■□ 3
PMPCA-202ENST00000371720 ADGRL1O94910 1474 aa33.72■■■□□ 2.99
PMPCA-202ENST00000371720 GPATCH8Q9UKJ3 1502 aaKnown RBP33.72■■■□□ 2.99
PMPCA-202ENST00000371720 DENND4BO75064 1496 aaPredicted RBP33.71■■■□□ 2.99
PMPCA-202ENST00000371720 EFCAB2Q5VUJ9 269 aa33.71■■■□□ 2.99
PMPCA-202ENST00000371720 ZMYM4Q5VZL5 1548 aa33.7■■■□□ 2.99
PMPCA-202ENST00000371720 ABCC1P33527 1531 aa33.68■■■□□ 2.98
PMPCA-202ENST00000371720 NCOA2Q15596 1464 aa33.66■■■□□ 2.98
PMPCA-202ENST00000371720 POGZQ7Z3K3 1410 aa33.65■■■□□ 2.98
PMPCA-202ENST00000371720 CCNB3Q8WWL7 1395 aa33.63■■■□□ 2.97
PMPCA-202ENST00000371720 SAMD9LQ8IVG5 1584 aa33.61■■■□□ 2.97
PMPCA-202ENST00000371720 SCAPERQ9BY12 1400 aa33.61■■■□□ 2.97
PMPCA-202ENST00000371720 KDM5CP41229 1560 aa33.6■■■□□ 2.97
PMPCA-202ENST00000371720 ZNF518AQ6AHZ1 1483 aa33.59■■■□□ 2.97
PMPCA-202ENST00000371720 MAGI2Q86UL8 1455 aa33.59■■■□□ 2.97
PMPCA-202ENST00000371720 PLEKHH2Q8IVE3 1493 aa33.58■■■□□ 2.97
PMPCA-202ENST00000371720 ARHGEF40Q8TER5 1519 aa33.57■■■□□ 2.96
PMPCA-202ENST00000371720 APLP2Q06481 763 aa33.54■■■□□ 2.96
PMPCA-202ENST00000371720 KIAA1107Q9UPP5 1409 aa33.53■■■□□ 2.96
PMPCA-202ENST00000371720 RAPGEF3O95398 923 aa33.53■■■□□ 2.96
PMPCA-202ENST00000371720 KANK4Q5T7N3 995 aaPredicted RBP33.5■■■□□ 2.95
PMPCA-202ENST00000371720 ARHGEF12Q9NZN5 1544 aa33.49■■■□□ 2.95
PMPCA-202ENST00000371720 CFDP1Q9UEE9 299 aaPredicted RBP33.48■■■□□ 2.95
PMPCA-202ENST00000371720 SYCP2Q9BX26 1530 aa33.48■■■□□ 2.95
PMPCA-202ENST00000371720 HECW2Q9P2P5 1572 aa33.47■■■□□ 2.95
PMPCA-202ENST00000371720 ZFYVE16Q7Z3T8 1539 aa33.47■■■□□ 2.95
PMPCA-202ENST00000371720 MIA2Q96PC5 1412 aa33.44■■■□□ 2.94
PMPCA-202ENST00000371720 MLH3Q9UHC1 1453 aa33.44■■■□□ 2.94
PMPCA-202ENST00000371720 MYOM3Q5VTT5 1437 aa33.43■■■□□ 2.94
PMPCA-202ENST00000371720 TRAPPC8Q9Y2L5 1435 aa33.39■■■□□ 2.94
PMPCA-202ENST00000371720 CAMSAP2Q08AD1 1489 aa33.38■■■□□ 2.93
PMPCA-202ENST00000371720 REREQ9P2R6 1566 aa33.37■■■□□ 2.93
PMPCA-202ENST00000371720 MBD5Q9P267 1494 aa33.37■■■□□ 2.93
PMPCA-202ENST00000371720 ARHGEF5Q12774 1597 aa33.35■■■□□ 2.93
PMPCA-202ENST00000371720 INO80Q9ULG1 1556 aaPredicted RBP33.34■■■□□ 2.93
PMPCA-202ENST00000371720 KIDINS220Q9ULH0 1771 aa33.34■■■□□ 2.93
PMPCA-202ENST00000371720 YEATS2Q9ULM3 1422 aa33.33■■■□□ 2.93
PMPCA-202ENST00000371720 DIP2CQ9Y2E4 1556 aa33.32■■■□□ 2.92
PMPCA-202ENST00000371720 ZNF777Q9ULD5 760 aaPredicted RBP33.31■■■□□ 2.92
PMPCA-202ENST00000371720 ABCA6Q8N139 1617 aa33.3■■■□□ 2.92
PMPCA-202ENST00000371720 AFAP1Q8N556 730 aa33.29■■■□□ 2.92
PMPCA-202ENST00000371720 ATP10AO60312 1499 aa33.28■■■□□ 2.92
PMPCA-202ENST00000371720 CCDC141Q6ZP82 1450 aa33.28■■■□□ 2.92
PMPCA-202ENST00000371720 C9orf84Q5VXU9 1444 aa33.28■■■□□ 2.92
PMPCA-202ENST00000371720 ATP7AQ04656 1500 aa33.27■■■□□ 2.92
PMPCA-202ENST00000371720 RSPH4AQ5TD94 716 aa33.25■■■□□ 2.91
PMPCA-202ENST00000371720 TCOF1Q13428 1488 aaKnown RBP33.25■■■□□ 2.91
PMPCA-202ENST00000371720 PTPN23Q9H3S7 1636 aa33.24■■■□□ 2.91
PMPCA-202ENST00000371720 BCORL1Q5H9F3 1711 aa33.24■■■□□ 2.91
PMPCA-202ENST00000371720 SIGLEC1Q9BZZ2 1709 aa33.24■■■□□ 2.91
PMPCA-202ENST00000371720 RTEL1-TNFRSF6BF6WH68 1400 aa33.23■■■□□ 2.91
PMPCA-202ENST00000371720 FGD6Q6ZV73 1430 aa33.23■■■□□ 2.91
PMPCA-202ENST00000371720 ZNF644Q9H582 1327 aaPredicted RBP33.23■■■□□ 2.91
PMPCA-202ENST00000371720 HNRNPMP52272 730 aaKnown RBP eCLIP33.21■■■□□ 2.91
PMPCA-202ENST00000371720 MAST1Q9Y2H9 1570 aa33.2■■■□□ 2.91
PMPCA-202ENST00000371720 ADAMTSL3P82987 1691 aa33.2■■■□□ 2.9
PMPCA-202ENST00000371720 ADGBQ8N7X0 1667 aa33.19■■■□□ 2.9
PMPCA-202ENST00000371720 AGLP35573 1532 aa33.18■■■□□ 2.9
PMPCA-202ENST00000371720 SPAG9O60271 1321 aaKnown RBP33.17■■■□□ 2.9
PMPCA-202ENST00000371720 PLXNC1O60486 1568 aa33.16■■■□□ 2.9
PMPCA-202ENST00000371720 CROCC2H7BZ55 1655 aa33.16■■■□□ 2.9
PMPCA-202ENST00000371720 KDM4FA0A1W2PPD8 638 aa33.12■■■□□ 2.89
PMPCA-202ENST00000371720 DNMT1P26358 1616 aaKnown RBP33.12■■■□□ 2.89
PMPCA-202ENST00000371720 SHANK2Q9UPX8 1470 aa33.12■■■□□ 2.89
PMPCA-202ENST00000371720 A2MP01023 1474 aa33.03■■■□□ 2.88
PMPCA-202ENST00000371720 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
PMPCA-202ENST00000371720 MYT1LQ9UL68 1186 aa33.02■■■□□ 2.88
PMPCA-202ENST00000371720 FER1L4A9Z1Z3 1794 aa33■■■□□ 2.87
PMPCA-202ENST00000371720 DAPK1P53355 1430 aa33■■■□□ 2.87
PMPCA-202ENST00000371720 ARID4BQ4LE39 1312 aaPredicted RBP32.99■■■□□ 2.87
PMPCA-202ENST00000371720 ABCC5O15440 1437 aa32.98■■■□□ 2.87
PMPCA-202ENST00000371720 TSPY4P0CV99 314 aa32.98■■■□□ 2.87
PMPCA-202ENST00000371720 TSPY10P0CW01 314 aa32.98■■■□□ 2.87
PMPCA-202ENST00000371720 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.97■■■□□ 2.87
PMPCA-202ENST00000371720 EIF2AK4Q9P2K8 1649 aaKnown RBP32.93■■■□□ 2.86
PMPCA-202ENST00000371720 DHX29Q7Z478 1369 aaKnown RBP32.92■■■□□ 2.86
PMPCA-202ENST00000371720 RIMS1Q86UR5 1692 aaKnown RBP32.91■■■□□ 2.86
PMPCA-202ENST00000371720 FAM135AQ9P2D6 1515 aa32.9■■■□□ 2.86
PMPCA-202ENST00000371720 ADGRL2O95490 1459 aa32.89■■■□□ 2.86
PMPCA-202ENST00000371720 RRBP1Q9P2E9 1410 aaKnown RBP32.89■■■□□ 2.86
PMPCA-202ENST00000371720 PTPRMP28827 1452 aa32.88■■■□□ 2.85
PMPCA-202ENST00000371720 DUOX2Q9NRD8 1548 aa32.87■■■□□ 2.85
PMPCA-202ENST00000371720 MROH2AA6NES4 1674 aa32.85■■■□□ 2.85
PMPCA-202ENST00000371720 RNF17Q9BXT8 1623 aaKnown RBP32.83■■■□□ 2.85
PMPCA-202ENST00000371720 CNTLNQ9NXG0 1405 aa32.81■■■□□ 2.84
PMPCA-202ENST00000371720 ERBINQ96RT1 1412 aa32.8■■■□□ 2.84
PMPCA-202ENST00000371720 PPP6R1Q9UPN7 881 aa32.77■■■□□ 2.84
PMPCA-202ENST00000371720 ANKRD30AQ9BXX3 1397 aa32.77■■■□□ 2.84
PMPCA-202ENST00000371720 NCOA1Q15788 1441 aa32.77■■■□□ 2.84
PMPCA-202ENST00000371720 KIF15Q9NS87 1388 aa32.76■■■□□ 2.83
PMPCA-202ENST00000371720 FAM50AQ14320 339 aaKnown RBP32.75■■■□□ 2.83
PMPCA-202ENST00000371720 PPARGC1BQ86YN6 1023 aaKnown RBP32.73■■■□□ 2.83
PMPCA-202ENST00000371720 ZC3H13Q5T200 1668 aaKnown RBP32.72■■■□□ 2.83
PMPCA-202ENST00000371720 MLECQ14165 292 aa32.72■■■□□ 2.83
PMPCA-202ENST00000371720 DEPDC5O75140 1603 aa32.72■■■□□ 2.83
PMPCA-202ENST00000371720 ROCK1Q13464 1354 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms