RNA–Protein interactions for RNA: ENST00000371335.4

LAMP2-202, Transcript of lysosomal associated membrane protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMP2, Length 4,030 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP2-202ENST00000371335 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
LAMP2-202ENST00000371335 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.61
LAMP2-202ENST00000371335 ADGBQ8N7X0 1667 aa11.26□□□□□ -0.61
LAMP2-202ENST00000371335 MAGI1Q96QZ7 1491 aaPredicted RBP11.26□□□□□ -0.61
LAMP2-202ENST00000371335 CLSPNQ9HAW4 1339 aa11.26□□□□□ -0.61
LAMP2-202ENST00000371335 TDRD9Q8NDG6 1382 aaKnown RBP11.25□□□□□ -0.61
LAMP2-202ENST00000371335 NUP153P49790 1475 aaKnown RBP11.25□□□□□ -0.61
LAMP2-202ENST00000371335 SALL2Q9Y467 1007 aaPredicted RBP11.25□□□□□ -0.61
LAMP2-202ENST00000371335 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
LAMP2-202ENST00000371335 CCDC18Q5T9S5 1454 aa11.24□□□□□ -0.61
LAMP2-202ENST00000371335 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
LAMP2-202ENST00000371335 FMN1Q68DA7 1419 aa11.24□□□□□ -0.61
LAMP2-202ENST00000371335 KIAA0586Q9BVV6 1533 aa11.23□□□□□ -0.61
LAMP2-202ENST00000371335 CCDC184Q52MB2 194 aa11.23□□□□□ -0.61
LAMP2-202ENST00000371335 AKNAQ7Z591 1439 aa11.22□□□□□ -0.61
LAMP2-202ENST00000371335 KIF14Q15058 1648 aa11.22□□□□□ -0.61
LAMP2-202ENST00000371335 FGD6Q6ZV73 1430 aa11.22□□□□□ -0.61
LAMP2-202ENST00000371335 NCOA2Q15596 1464 aa11.22□□□□□ -0.61
LAMP2-202ENST00000371335 ARID4BQ4LE39 1312 aaPredicted RBP11.22□□□□□ -0.61
LAMP2-202ENST00000371335 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
LAMP2-202ENST00000371335 CDC42BPBQ9Y5S2 1711 aa11.2□□□□□ -0.62
LAMP2-202ENST00000371335 SYNJ2O15056 1496 aa11.19□□□□□ -0.62
LAMP2-202ENST00000371335 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
LAMP2-202ENST00000371335 AMER1Q5JTC6 1135 aaPredicted RBP11.19□□□□□ -0.62
LAMP2-202ENST00000371335 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
LAMP2-202ENST00000371335 P3H3Q8IVL6 736 aa11.19□□□□□ -0.62
LAMP2-202ENST00000371335 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
LAMP2-202ENST00000371335 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
LAMP2-202ENST00000371335 LAS1LQ9Y4W2 734 aaKnown RBP11.17□□□□□ -0.62
LAMP2-202ENST00000371335 ATP1B4Q9UN42 357 aaPredicted RBP11.17□□□□□ -0.62
LAMP2-202ENST00000371335 MYOM3Q5VTT5 1437 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 A0A0U1RQG5 324 aaPredicted RBP11.16□□□□□ -0.62
LAMP2-202ENST00000371335 SENP3-EIF4A1A0A087X0R7 540 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 NEFMP07197 916 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 VSIG10Q8N0Z9 540 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 NAIPQ13075 1403 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
LAMP2-202ENST00000371335 FAM50AQ14320 339 aaKnown RBP11.13□□□□□ -0.63
LAMP2-202ENST00000371335 PREX2Q70Z35 1606 aa11.13□□□□□ -0.63
LAMP2-202ENST00000371335 SETD5Q9C0A6 1442 aa11.12□□□□□ -0.63
LAMP2-202ENST00000371335 ANP32CO43423 234 aa11.12□□□□□ -0.63
LAMP2-202ENST00000371335 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
LAMP2-202ENST00000371335 KDM5DQ9BY66 1539 aa11.11□□□□□ -0.63
LAMP2-202ENST00000371335 HNRNPUQ00839 825 aaKnown RBP eCLIP11.11□□□□□ -0.63
LAMP2-202ENST00000371335 PKNOX2Q96KN3 472 aa11.1□□□□□ -0.63
LAMP2-202ENST00000371335 PODXL2Q9NZ53 605 aa11.1□□□□□ -0.63
LAMP2-202ENST00000371335 NAP1L5Q96NT1 182 aaPredicted RBP11.1□□□□□ -0.63
LAMP2-202ENST00000371335 MIA2Q96PC5 1412 aa11.1□□□□□ -0.63
LAMP2-202ENST00000371335 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
LAMP2-202ENST00000371335 MBD5Q9P267 1494 aa11.08□□□□□ -0.64
LAMP2-202ENST00000371335 ERCC6L2Q5T890 1561 aa11.08□□□□□ -0.64
LAMP2-202ENST00000371335 MAST1Q9Y2H9 1570 aa11.08□□□□□ -0.64
LAMP2-202ENST00000371335 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
LAMP2-202ENST00000371335 PAK3O75914 559 aaPredicted RBP11.06□□□□□ -0.64
LAMP2-202ENST00000371335 NOP58Q9Y2X3 529 aaKnown RBP11.06□□□□□ -0.64
LAMP2-202ENST00000371335 SAMD9LQ8IVG5 1584 aa11.05□□□□□ -0.64
LAMP2-202ENST00000371335 WASHC2AQ641Q2 1341 aa11.05□□□□□ -0.64
LAMP2-202ENST00000371335 B4GALNT3Q6L9W6 998 aa11.05□□□□□ -0.64
LAMP2-202ENST00000371335 UACAQ9BZF9 1416 aa11.05□□□□□ -0.64
LAMP2-202ENST00000371335 IL27Q8NEV9 243 aa11.04□□□□□ -0.64
LAMP2-202ENST00000371335 TEX14Q8IWB6 1497 aa11.04□□□□□ -0.64
LAMP2-202ENST00000371335 UNC13BO14795 1591 aa11.03□□□□□ -0.64
LAMP2-202ENST00000371335 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
LAMP2-202ENST00000371335 PLB1Q6P1J6 1458 aa11.03□□□□□ -0.64
LAMP2-202ENST00000371335 E9PCH4 1651 aa11.02□□□□□ -0.64
LAMP2-202ENST00000371335 GPATCH8Q9UKJ3 1502 aaKnown RBP11.02□□□□□ -0.65
LAMP2-202ENST00000371335 ARID3AQ99856 593 aa11.02□□□□□ -0.65
LAMP2-202ENST00000371335 SHANK2Q9UPX8 1470 aa11.02□□□□□ -0.65
LAMP2-202ENST00000371335 CCER2I3L3R5 266 aa11.01□□□□□ -0.65
LAMP2-202ENST00000371335 PZPP20742 1482 aa11.01□□□□□ -0.65
LAMP2-202ENST00000371335 ROCK1Q13464 1354 aa11.01□□□□□ -0.65
LAMP2-202ENST00000371335 ABCC5O15440 1437 aa11.01□□□□□ -0.65
LAMP2-202ENST00000371335 FOXD1Q16676 465 aa11.01□□□□□ -0.65
LAMP2-202ENST00000371335 PLXNC1O60486 1568 aa11□□□□□ -0.65
LAMP2-202ENST00000371335 DAPK1P53355 1430 aa11□□□□□ -0.65
LAMP2-202ENST00000371335 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
LAMP2-202ENST00000371335 DEPDC5O75140 1603 aa11□□□□□ -0.65
LAMP2-202ENST00000371335 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
LAMP2-202ENST00000371335 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
LAMP2-202ENST00000371335 FANCIQ9NVI1 1328 aa10.98□□□□□ -0.65
LAMP2-202ENST00000371335 MYO5CQ9NQX4 1742 aa10.98□□□□□ -0.65
LAMP2-202ENST00000371335 ATP10BO94823 1461 aa10.98□□□□□ -0.65
LAMP2-202ENST00000371335 PTPRGP23470 1445 aa10.98□□□□□ -0.65
LAMP2-202ENST00000371335 ERICH6BQ5W0A0 696 aa10.98□□□□□ -0.65
LAMP2-202ENST00000371335 FAM9BQ8IZU0 186 aa10.97□□□□□ -0.65
LAMP2-202ENST00000371335 BCORL1Q5H9F3 1711 aa10.96□□□□□ -0.65
LAMP2-202ENST00000371335 TROQ12816 1431 aaPredicted RBP10.96□□□□□ -0.66
LAMP2-202ENST00000371335 HSPA5P11021 654 aaKnown RBP10.95□□□□□ -0.66
LAMP2-202ENST00000371335 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.95□□□□□ -0.661e-11■■■■□ 19.7
LAMP2-202ENST00000371335 ABCA9Q8IUA7 1624 aa10.95□□□□□ -0.66
LAMP2-202ENST00000371335 IQGAP3Q86VI3 1631 aa10.94□□□□□ -0.66
LAMP2-202ENST00000371335 ABCC2Q92887 1545 aa10.93□□□□□ -0.66
LAMP2-202ENST00000371335 UHRF1BP1LA0JNW5 1464 aa10.93□□□□□ -0.66
LAMP2-202ENST00000371335 SLC24A1O60721 1099 aa10.93□□□□□ -0.66
LAMP2-202ENST00000371335 PLEKHG5O94827 1062 aa10.93□□□□□ -0.66
LAMP2-202ENST00000371335 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
LAMP2-202ENST00000371335 PRG4Q92954 1404 aaPredicted RBP10.92□□□□□ -0.66
LAMP2-202ENST00000371335 CHIC2Q9UKJ5 165 aa10.92□□□□□ -0.66
LAMP2-202ENST00000371335 LAMC1P11047 1609 aa10.92□□□□□ -0.66
LAMP2-202ENST00000371335 RNF17Q9BXT8 1623 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms