RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 PLPPR3Q6T4P5 718 aa17.08■□□□□ 0.32
EXOSC1-203ENST00000370886 TTC37Q6PGP7 1564 aa17.07■□□□□ 0.32
EXOSC1-203ENST00000370886 PLEKHD1A6NEE1 506 aa17.07■□□□□ 0.32
EXOSC1-203ENST00000370886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.05■□□□□ 0.32
EXOSC1-203ENST00000370886 YEATS2Q9ULM3 1422 aa17.04■□□□□ 0.32
EXOSC1-203ENST00000370886 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
EXOSC1-203ENST00000370886 SIGLEC1Q9BZZ2 1709 aa17.03■□□□□ 0.32
EXOSC1-203ENST00000370886 DISP3Q9P2K9 1392 aa17.02■□□□□ 0.31
EXOSC1-203ENST00000370886 HECW1Q76N89 1606 aa17.01■□□□□ 0.31
EXOSC1-203ENST00000370886 MLECQ14165 292 aa17.01■□□□□ 0.31
EXOSC1-203ENST00000370886 FMN1Q68DA7 1419 aa17.01■□□□□ 0.31
EXOSC1-203ENST00000370886 ARHGEF12Q9NZN5 1544 aa16.99■□□□□ 0.31
EXOSC1-203ENST00000370886 DMRT2Q9Y5R5 561 aa16.98■□□□□ 0.31
EXOSC1-203ENST00000370886 SOCS7O14512 581 aa16.97■□□□□ 0.31
EXOSC1-203ENST00000370886 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.31
EXOSC1-203ENST00000370886 SETD1BQ9UPS6 1966 aaKnown RBP16.96■□□□□ 0.31
EXOSC1-203ENST00000370886 SCAPERQ9BY12 1400 aa16.96■□□□□ 0.3
EXOSC1-203ENST00000370886 ATP10AO60312 1499 aa16.95■□□□□ 0.3
EXOSC1-203ENST00000370886 UHRF1BP1Q6BDS2 1440 aa16.94■□□□□ 0.3
EXOSC1-203ENST00000370886 ILDR2Q71H61 639 aa16.93■□□□□ 0.3
EXOSC1-203ENST00000370886 PLCH2O75038 1416 aa16.93■□□□□ 0.3
EXOSC1-203ENST00000370886 SPATA31D1Q6ZQQ2 1576 aa16.93■□□□□ 0.3
EXOSC1-203ENST00000370886 STRCQ7RTU9 1775 aa16.92■□□□□ 0.3
EXOSC1-203ENST00000370886 MYO5CQ9NQX4 1742 aa16.91■□□□□ 0.3
EXOSC1-203ENST00000370886 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
EXOSC1-203ENST00000370886 CASKIN1Q8WXD9 1431 aa16.88■□□□□ 0.29
EXOSC1-203ENST00000370886 ZNF518AQ6AHZ1 1483 aa16.88■□□□□ 0.29
EXOSC1-203ENST00000370886 EFCAB2Q5VUJ9 269 aa16.87■□□□□ 0.29
EXOSC1-203ENST00000370886 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
EXOSC1-203ENST00000370886 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
EXOSC1-203ENST00000370886 PTPRTO14522 1441 aa16.86■□□□□ 0.29
EXOSC1-203ENST00000370886 KDM5CP41229 1560 aa16.85■□□□□ 0.29
EXOSC1-203ENST00000370886 VPS8Q8N3P4 1428 aa16.84■□□□□ 0.29
EXOSC1-203ENST00000370886 KIF14Q15058 1648 aa16.83■□□□□ 0.28
EXOSC1-203ENST00000370886 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.28
EXOSC1-203ENST00000370886 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
EXOSC1-203ENST00000370886 FYCO1Q9BQS8 1478 aa16.82■□□□□ 0.28
EXOSC1-203ENST00000370886 APLP2Q06481 763 aa16.82■□□□□ 0.28
EXOSC1-203ENST00000370886 C3P01024 1663 aa16.81■□□□□ 0.28
EXOSC1-203ENST00000370886 DIP2CQ9Y2E4 1556 aa16.81■□□□□ 0.28
EXOSC1-203ENST00000370886 ARHGAP5Q13017 1502 aa16.8■□□□□ 0.28
EXOSC1-203ENST00000370886 MYT1LQ9UL68 1186 aa16.8■□□□□ 0.28
EXOSC1-203ENST00000370886 ESF1Q9H501 851 aaKnown RBP16.79■□□□□ 0.28
EXOSC1-203ENST00000370886 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
EXOSC1-203ENST00000370886 AGLP35573 1532 aa16.77■□□□□ 0.28
EXOSC1-203ENST00000370886 CCDC18Q5T9S5 1454 aa16.77■□□□□ 0.28
EXOSC1-203ENST00000370886 TRAPPC8Q9Y2L5 1435 aa16.77■□□□□ 0.27
EXOSC1-203ENST00000370886 AFAP1Q8N556 730 aa16.76■□□□□ 0.27
EXOSC1-203ENST00000370886 ABCA6Q8N139 1617 aa16.76■□□□□ 0.27
EXOSC1-203ENST00000370886 TROQ12816 1431 aaPredicted RBP16.76■□□□□ 0.27
EXOSC1-203ENST00000370886 MLH3Q9UHC1 1453 aa16.75■□□□□ 0.27
EXOSC1-203ENST00000370886 NCOA1Q15788 1441 aa16.75■□□□□ 0.27
EXOSC1-203ENST00000370886 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
EXOSC1-203ENST00000370886 MTUS2Q5JR59 1369 aa16.74■□□□□ 0.27
EXOSC1-203ENST00000370886 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
EXOSC1-203ENST00000370886 PREX2Q70Z35 1606 aa16.7■□□□□ 0.26
EXOSC1-203ENST00000370886 ABCC1P33527 1531 aa16.7■□□□□ 0.26
EXOSC1-203ENST00000370886 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
EXOSC1-203ENST00000370886 KANK4Q5T7N3 995 aaPredicted RBP16.69■□□□□ 0.26
EXOSC1-203ENST00000370886 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
EXOSC1-203ENST00000370886 NPATQ14207 1427 aa16.69■□□□□ 0.26
EXOSC1-203ENST00000370886 ITSN2Q9NZM3 1697 aa16.69■□□□□ 0.26
EXOSC1-203ENST00000370886 PPARGC1BQ86YN6 1023 aaKnown RBP16.68■□□□□ 0.26
EXOSC1-203ENST00000370886 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
EXOSC1-203ENST00000370886 LRRIQ1Q96JM4 1722 aa16.66■□□□□ 0.26
EXOSC1-203ENST00000370886 UBAP1LF5GYI3 381 aa16.63■□□□□ 0.25
EXOSC1-203ENST00000370886 ZNF142P52746 1687 aaPredicted RBP16.62■□□□□ 0.25
EXOSC1-203ENST00000370886 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
EXOSC1-203ENST00000370886 PLA2R1Q13018 1463 aa16.62■□□□□ 0.25
EXOSC1-203ENST00000370886 ZNF777Q9ULD5 760 aaPredicted RBP16.62■□□□□ 0.25
EXOSC1-203ENST00000370886 TIAM1Q13009 1591 aa16.62■□□□□ 0.25
EXOSC1-203ENST00000370886 CCNB3Q8WWL7 1395 aa16.61■□□□□ 0.25
EXOSC1-203ENST00000370886 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
EXOSC1-203ENST00000370886 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
EXOSC1-203ENST00000370886 PKD2Q13563 968 aa16.6■□□□□ 0.25
EXOSC1-203ENST00000370886 ZNF335Q9H4Z2 1342 aaPredicted RBP16.6■□□□□ 0.25
EXOSC1-203ENST00000370886 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
EXOSC1-203ENST00000370886 CDC42BPAQ5VT25 1732 aa16.59■□□□□ 0.25
EXOSC1-203ENST00000370886 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.24
EXOSC1-203ENST00000370886 EHBP1L1Q8N3D4 1523 aa16.58■□□□□ 0.24
EXOSC1-203ENST00000370886 SAMD9LQ8IVG5 1584 aa16.58■□□□□ 0.24
EXOSC1-203ENST00000370886 CEP170BQ9Y4F5 1589 aaPredicted RBP16.57■□□□□ 0.24
EXOSC1-203ENST00000370886 MAP3K1Q13233 1512 aa16.57■□□□□ 0.24
EXOSC1-203ENST00000370886 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
EXOSC1-203ENST00000370886 CLTCQ00610 1675 aaKnown RBP16.56■□□□□ 0.24
EXOSC1-203ENST00000370886 TCOF1Q13428 1488 aaKnown RBP16.56■□□□□ 0.24
EXOSC1-203ENST00000370886 SYCP2Q9BX26 1530 aa16.55■□□□□ 0.24
EXOSC1-203ENST00000370886 NCOA2Q15596 1464 aa16.54■□□□□ 0.24
EXOSC1-203ENST00000370886 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
EXOSC1-203ENST00000370886 PLXNC1O60486 1568 aa16.53■□□□□ 0.24
EXOSC1-203ENST00000370886 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
EXOSC1-203ENST00000370886 ATP7AQ04656 1500 aa16.53■□□□□ 0.24
EXOSC1-203ENST00000370886 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
EXOSC1-203ENST00000370886 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
EXOSC1-203ENST00000370886 PTPRKQ15262 1439 aa16.52■□□□□ 0.23
EXOSC1-203ENST00000370886 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
EXOSC1-203ENST00000370886 A2MP01023 1474 aa16.5■□□□□ 0.23
EXOSC1-203ENST00000370886 PLEKHH2Q8IVE3 1493 aa16.5■□□□□ 0.23
EXOSC1-203ENST00000370886 INO80Q9ULG1 1556 aaPredicted RBP16.5■□□□□ 0.23
EXOSC1-203ENST00000370886 CPS1P31327 1500 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms