RNA–Protein interactions for RNA: ENST00000370536.4

SOX3-201, Transcript of SRY-box 3, humanhuman

APPRIS P1 BASIC

Gene SOX3, Length 2,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3-201ENST00000370536 PPP1R15AO75807 674 aaPredicted RBP30.02■■■□□ 2.4
SOX3-201ENST00000370536 ATP10BO94823 1461 aa30.01■■■□□ 2.4
SOX3-201ENST00000370536 GPATCH8Q9UKJ3 1502 aaKnown RBP30.01■■■□□ 2.4
SOX3-201ENST00000370536 TRIM52Q96A61 297 aa30.01■■■□□ 2.39
SOX3-201ENST00000370536 CFDP1Q9UEE9 299 aaPredicted RBP30.01■■■□□ 2.39
SOX3-201ENST00000370536 ROCK1Q13464 1354 aa30■■■□□ 2.39
SOX3-201ENST00000370536 PTPRGP23470 1445 aa29.99■■■□□ 2.39
SOX3-201ENST00000370536 TONSLQ96HA7 1378 aa29.99■■■□□ 2.39
SOX3-201ENST00000370536 ITSN2Q9NZM3 1697 aa29.99■■■□□ 2.39
SOX3-201ENST00000370536 CAMSAP2Q08AD1 1489 aa29.98■■■□□ 2.39
SOX3-201ENST00000370536 PLEKHD1A6NEE1 506 aa29.98■■■□□ 2.39
SOX3-201ENST00000370536 DENND4BO75064 1496 aaPredicted RBP29.96■■■□□ 2.39
SOX3-201ENST00000370536 YTHDC1Q96MU7 727 aaKnown RBP29.94■■■□□ 2.38
SOX3-201ENST00000370536 ZNF777Q9ULD5 760 aaPredicted RBP29.92■■■□□ 2.38
SOX3-201ENST00000370536 MPHOSPH9Q99550 1183 aa29.89■■■□□ 2.38
SOX3-201ENST00000370536 ABCC10Q5T3U5 1492 aa29.88■■■□□ 2.37
SOX3-201ENST00000370536 SHROOM2Q13796 1616 aa29.88■■■□□ 2.37
SOX3-201ENST00000370536 MYT1Q01538 1121 aa29.86■■■□□ 2.37
SOX3-201ENST00000370536 CDC42BPAQ5VT25 1732 aa29.82■■■□□ 2.36
SOX3-201ENST00000370536 KDM5BQ9UGL1 1544 aa29.8■■■□□ 2.36
SOX3-201ENST00000370536 NCOA1Q15788 1441 aa29.8■■■□□ 2.36
SOX3-201ENST00000370536 FOXD1Q16676 465 aa29.78■■■□□ 2.36
SOX3-201ENST00000370536 ERCC6L2Q5T890 1561 aa29.78■■■□□ 2.36
SOX3-201ENST00000370536 CROCC2H7BZ55 1655 aa29.77■■■□□ 2.36
SOX3-201ENST00000370536 ADGBQ8N7X0 1667 aa29.77■■■□□ 2.36
SOX3-201ENST00000370536 ADGRL2O95490 1459 aa29.77■■■□□ 2.36
SOX3-201ENST00000370536 HIRIP3Q9BW71 556 aaPredicted RBP29.76■■■□□ 2.35
SOX3-201ENST00000370536 ANKRD30AQ9BXX3 1397 aa29.7■■■□□ 2.35
SOX3-201ENST00000370536 SLC4A1APQ9BWU0 796 aaKnown RBP29.7■■■□□ 2.35
SOX3-201ENST00000370536 DDX10Q13206 875 aaKnown RBP29.69■■■□□ 2.34
SOX3-201ENST00000370536 ANKRD30BQ9BXX2 1392 aa29.69■■■□□ 2.34
SOX3-201ENST00000370536 CLASP1Q7Z460 1538 aa29.67■■■□□ 2.34
SOX3-201ENST00000370536 ABCC2Q92887 1545 aa29.65■■■□□ 2.34
SOX3-201ENST00000370536 PZPP20742 1482 aa29.65■■■□□ 2.34
SOX3-201ENST00000370536 SHANK2Q9UPX8 1470 aa29.65■■■□□ 2.34
SOX3-201ENST00000370536 C9orf84Q5VXU9 1444 aa29.64■■■□□ 2.34
SOX3-201ENST00000370536 HNRNPMP52272 730 aaKnown RBP eCLIP29.62■■■□□ 2.33
SOX3-201ENST00000370536 ANKRD50Q9ULJ7 1429 aa29.61■■■□□ 2.33
SOX3-201ENST00000370536 L3MBTL2Q969R5 705 aa29.6■■■□□ 2.33
SOX3-201ENST00000370536 RPRD2Q5VT52 1461 aaKnown RBP29.6■■■□□ 2.33
SOX3-201ENST00000370536 PREX2Q70Z35 1606 aa29.59■■■□□ 2.33
SOX3-201ENST00000370536 TSPY4P0CV99 314 aa29.59■■■□□ 2.33
SOX3-201ENST00000370536 TSPY10P0CW01 314 aa29.59■■■□□ 2.33
SOX3-201ENST00000370536 CDC42BPBQ9Y5S2 1711 aa29.58■■■□□ 2.33
SOX3-201ENST00000370536 MBD5Q9P267 1494 aa29.58■■■□□ 2.33
SOX3-201ENST00000370536 SAMD9LQ8IVG5 1584 aa29.58■■■□□ 2.33
SOX3-201ENST00000370536 ARHGEF5Q12774 1597 aa29.57■■■□□ 2.32
SOX3-201ENST00000370536 TTC37Q6PGP7 1564 aa29.55■■■□□ 2.32
SOX3-201ENST00000370536 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.54■■■□□ 2.32
SOX3-201ENST00000370536 CCDC141Q6ZP82 1450 aa29.51■■■□□ 2.31
SOX3-201ENST00000370536 TEX14Q8IWB6 1497 aa29.51■■■□□ 2.31
SOX3-201ENST00000370536 KIAA1107Q9UPP5 1409 aa29.5■■■□□ 2.31
SOX3-201ENST00000370536 KIF15Q9NS87 1388 aa29.49■■■□□ 2.31
SOX3-201ENST00000370536 ARHGAP5Q13017 1502 aa29.48■■■□□ 2.31
SOX3-201ENST00000370536 PKD2Q13563 968 aa29.48■■■□□ 2.31
SOX3-201ENST00000370536 KCNH8Q96L42 1107 aa29.47■■■□□ 2.31
SOX3-201ENST00000370536 UHRF1BP1LA0JNW5 1464 aa29.46■■■□□ 2.31
SOX3-201ENST00000370536 HSPA5P11021 654 aaKnown RBP29.45■■■□□ 2.31
SOX3-201ENST00000370536 NUP155O75694 1391 aa29.45■■■□□ 2.3
SOX3-201ENST00000370536 ZCCHC11Q5TAX3 1644 aaKnown RBP29.45■■■□□ 2.3
SOX3-201ENST00000370536 RSPH4AQ5TD94 716 aa29.44■■■□□ 2.3
SOX3-201ENST00000370536 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
SOX3-201ENST00000370536 NBPF8Q3BBV2 869 aa29.42■■■□□ 2.3
SOX3-201ENST00000370536 MYO5CQ9NQX4 1742 aa29.41■■■□□ 2.3
SOX3-201ENST00000370536 EIF4G2P78344 907 aaKnown RBP eCLIP29.4■■■□□ 2.3
SOX3-201ENST00000370536 KDM5DQ9BY66 1539 aa29.38■■■□□ 2.29
SOX3-201ENST00000370536 ANP32CO43423 234 aa29.33■■■□□ 2.29
SOX3-201ENST00000370536 PLEKHH2Q8IVE3 1493 aa29.33■■■□□ 2.29
SOX3-201ENST00000370536 MAST1Q9Y2H9 1570 aa29.33■■■□□ 2.29
SOX3-201ENST00000370536 PLCH2O75038 1416 aa29.32■■■□□ 2.28
SOX3-201ENST00000370536 WASHC2AQ641Q2 1341 aa29.32■■■□□ 2.28
SOX3-201ENST00000370536 ARHGEF12Q9NZN5 1544 aa29.29■■■□□ 2.28
SOX3-201ENST00000370536 EFCAB2Q5VUJ9 269 aa29.26■■■□□ 2.27
SOX3-201ENST00000370536 CCER2I3L3R5 266 aa29.24■■■□□ 2.27
SOX3-201ENST00000370536 FAM135AQ9P2D6 1515 aa29.23■■■□□ 2.27
SOX3-201ENST00000370536 PLXNC1O60486 1568 aa29.22■■■□□ 2.27
SOX3-201ENST00000370536 C11orf95C9JLR9 678 aaPredicted RBP29.2■■■□□ 2.26
SOX3-201ENST00000370536 SPATA31E1Q6ZUB1 1445 aa29.19■■■□□ 2.26
SOX3-201ENST00000370536 ABCC1P33527 1531 aa29.19■■■□□ 2.26
SOX3-201ENST00000370536 ZNF326Q5BKZ1 582 aaKnown RBP29.18■■■□□ 2.26
SOX3-201ENST00000370536 UNC13BO14795 1591 aa29.17■■■□□ 2.26
SOX3-201ENST00000370536 CCDC7Q96M83 1385 aa29.16■■■□□ 2.26
SOX3-201ENST00000370536 WDR7Q9Y4E6 1490 aa29.15■■■□□ 2.26
SOX3-201ENST00000370536 TRAPPC8Q9Y2L5 1435 aa29.15■■■□□ 2.26
SOX3-201ENST00000370536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.15■■■□□ 2.26
SOX3-201ENST00000370536 DUOX2Q9NRD8 1548 aa29.14■■■□□ 2.25
SOX3-201ENST00000370536 UHRF1BP1Q6BDS2 1440 aa29.11■■■□□ 2.25
SOX3-201ENST00000370536 CNTLNQ9NXG0 1405 aa29.11■■■□□ 2.25
SOX3-201ENST00000370536 ARAP3Q8WWN8 1544 aa29.1■■■□□ 2.25
SOX3-201ENST00000370536 ERBINQ96RT1 1412 aa29.08■■■□□ 2.25
SOX3-201ENST00000370536 OSCARQ8IYS5 282 aa29.06■■■□□ 2.24
SOX3-201ENST00000370536 SUPT16HQ9Y5B9 1047 aaKnown RBP29.06■■■□□ 2.24
SOX3-201ENST00000370536 KIF7Q2M1P5 1343 aa29.06■■■□□ 2.24
SOX3-201ENST00000370536 IQGAP3Q86VI3 1631 aa29.06■■■□□ 2.24
SOX3-201ENST00000370536 USP47Q96K76 1375 aa29.05■■■□□ 2.24
SOX3-201ENST00000370536 KDM2AQ9Y2K7 1162 aa29.04■■■□□ 2.24
SOX3-201ENST00000370536 SPAG9O60271 1321 aaKnown RBP29.04■■■□□ 2.24
SOX3-201ENST00000370536 AFAP1Q8N556 730 aa29.03■■■□□ 2.24
SOX3-201ENST00000370536 RALGAPBQ86X10 1494 aa29.03■■■□□ 2.24
SOX3-201ENST00000370536 CCDC144AA2RUR9 1427 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms