RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PLCB2Q00722 1185 aa16.62■□□□□ 0.25
PTPRK-207ENST00000368226 PTMAP06454 111 aaKnown RBP16.62■□□□□ 0.25
PTPRK-207ENST00000368226 SETD5Q9C0A6 1442 aa16.61■□□□□ 0.25
PTPRK-207ENST00000368226 CSB-PGBD3P0DP91 1061 aa16.61■□□□□ 0.25
PTPRK-207ENST00000368226 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
PTPRK-207ENST00000368226 RTF1Q92541 710 aaKnown RBP16.59■□□□□ 0.25
PTPRK-207ENST00000368226 CARMIL2Q6F5E8 1435 aa16.59■□□□□ 0.25
PTPRK-207ENST00000368226 ROCK2O75116 1388 aaKnown RBP16.59■□□□□ 0.25
PTPRK-207ENST00000368226 PPP4R2Q9NY27 417 aa16.59■□□□□ 0.25
PTPRK-207ENST00000368226 NUP155O75694 1391 aa16.58■□□□□ 0.25
PTPRK-207ENST00000368226 KIF3BO15066 747 aa16.58■□□□□ 0.25
PTPRK-207ENST00000368226 HSP90AB1P08238 724 aaKnown RBP16.58■□□□□ 0.25
PTPRK-207ENST00000368226 PNNQ9H307 717 aaKnown RBP16.58■□□□□ 0.24
PTPRK-207ENST00000368226 HDGFL2Q7Z4V5 671 aaPredicted RBP16.57■□□□□ 0.24
PTPRK-207ENST00000368226 MPHOSPH9Q99550 1183 aa16.56■□□□□ 0.24
PTPRK-207ENST00000368226 PDS5BQ9NTI5 1447 aa16.56■□□□□ 0.24
PTPRK-207ENST00000368226 ISY1Q9ULR0 285 aaKnown RBP16.56■□□□□ 0.24
PTPRK-207ENST00000368226 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
PTPRK-207ENST00000368226 U2AF1L5P0DN76 240 aaPredicted RBP16.55■□□□□ 0.24
PTPRK-207ENST00000368226 U2AF1Q01081 240 aaKnown RBP eCLIP16.55■□□□□ 0.24
PTPRK-207ENST00000368226 VPS8Q8N3P4 1428 aa16.53■□□□□ 0.24
PTPRK-207ENST00000368226 EFCAB2Q5VUJ9 269 aa16.53■□□□□ 0.24
PTPRK-207ENST00000368226 DNTTIP2Q5QJE6 756 aaKnown RBP16.52■□□□□ 0.24
PTPRK-207ENST00000368226 FHOD3Q2V2M9 1422 aa16.52■□□□□ 0.24
PTPRK-207ENST00000368226 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.23
PTPRK-207ENST00000368226 KTN1Q86UP2 1357 aaKnown RBP16.51■□□□□ 0.23
PTPRK-207ENST00000368226 WIZO95785 1651 aa16.5■□□□□ 0.23
PTPRK-207ENST00000368226 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
PTPRK-207ENST00000368226 CCDC146Q8IYE0 955 aa16.49■□□□□ 0.23
PTPRK-207ENST00000368226 MS4A1P11836 297 aa16.49■□□□□ 0.23
PTPRK-207ENST00000368226 LTV1Q96GA3 475 aaPredicted RBP16.49■□□□□ 0.23
PTPRK-207ENST00000368226 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.48■□□□□ 0.231e-6■■■□□ 16.3
PTPRK-207ENST00000368226 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
PTPRK-207ENST00000368226 SMARCA2P51531 1590 aa16.47■□□□□ 0.23
PTPRK-207ENST00000368226 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
PTPRK-207ENST00000368226 ITPRIPQ8IWB1 547 aa16.47■□□□□ 0.23
PTPRK-207ENST00000368226 ANKRD30AQ9BXX3 1397 aa16.46■□□□□ 0.23
PTPRK-207ENST00000368226 AMER1Q5JTC6 1135 aaPredicted RBP16.45■□□□□ 0.22
PTPRK-207ENST00000368226 CLSTN1O94985 981 aa16.45■□□□□ 0.22
PTPRK-207ENST00000368226 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
PTPRK-207ENST00000368226 CHMP3Q9Y3E7 222 aa16.44■□□□□ 0.22
PTPRK-207ENST00000368226 NOP58Q9Y2X3 529 aaKnown RBP16.44■□□□□ 0.22
PTPRK-207ENST00000368226 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
PTPRK-207ENST00000368226 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
PTPRK-207ENST00000368226 FMN1Q68DA7 1419 aa16.43■□□□□ 0.22
PTPRK-207ENST00000368226 HSCBQ8IWL3 235 aa16.43■□□□□ 0.22
PTPRK-207ENST00000368226 NGDNQ8NEJ9 315 aaKnown RBP16.43■□□□□ 0.22
PTPRK-207ENST00000368226 ANP32EQ9BTT0 268 aa16.43■□□□□ 0.22
PTPRK-207ENST00000368226 GLIPR1L2Q4G1C9 344 aa16.42■□□□□ 0.22
PTPRK-207ENST00000368226 L3MBTL2Q969R5 705 aa16.41■□□□□ 0.22
PTPRK-207ENST00000368226 EID1Q9Y6B2 187 aa16.4■□□□□ 0.22
PTPRK-207ENST00000368226 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
PTPRK-207ENST00000368226 CYB5RLQ6IPT4 315 aa16.39■□□□□ 0.21
PTPRK-207ENST00000368226 JPH4Q96JJ6 628 aa16.39■□□□□ 0.21
PTPRK-207ENST00000368226 CLUAP1Q96AJ1 413 aa16.39■□□□□ 0.21
PTPRK-207ENST00000368226 SLC4A10Q6U841 1118 aa16.39■□□□□ 0.21
PTPRK-207ENST00000368226 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
PTPRK-207ENST00000368226 RRP7AQ9Y3A4 280 aaKnown RBP16.37■□□□□ 0.21
PTPRK-207ENST00000368226 MCCP23508 829 aa16.37■□□□□ 0.21
PTPRK-207ENST00000368226 AMPHP49418 695 aa16.36■□□□□ 0.21
PTPRK-207ENST00000368226 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
PTPRK-207ENST00000368226 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
PTPRK-207ENST00000368226 IPO8O15397 1037 aaKnown RBP16.35■□□□□ 0.21
PTPRK-207ENST00000368226 SMC4Q9NTJ3 1288 aa16.35■□□□□ 0.21
PTPRK-207ENST00000368226 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
PTPRK-207ENST00000368226 CADPSQ9ULU8 1353 aa16.35■□□□□ 0.21
PTPRK-207ENST00000368226 EIF3AQ14152 1382 aaKnown RBP16.34■□□□□ 0.21
PTPRK-207ENST00000368226 NAP1L5Q96NT1 182 aaPredicted RBP16.34■□□□□ 0.21
PTPRK-207ENST00000368226 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
PTPRK-207ENST00000368226 TERF2IPQ9NYB0 399 aa16.33■□□□□ 0.2
PTPRK-207ENST00000368226 TOP2AP11388 1531 aaKnown RBP16.33■□□□□ 0.2
PTPRK-207ENST00000368226 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
PTPRK-207ENST00000368226 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
PTPRK-207ENST00000368226 RALBP1Q15311 655 aa16.32■□□□□ 0.2
PTPRK-207ENST00000368226 GORABQ5T7V8 394 aa16.32■□□□□ 0.2
PTPRK-207ENST00000368226 TAF7LQ5H9L4 462 aa16.31■□□□□ 0.2
PTPRK-207ENST00000368226 NOL8Q76FK4 1167 aaKnown RBP16.31■□□□□ 0.2
PTPRK-207ENST00000368226 TRIM6-TRIM34B2RNG4 842 aa16.3■□□□□ 0.2
PTPRK-207ENST00000368226 CCDC18Q5T9S5 1454 aa16.3■□□□□ 0.2
PTPRK-207ENST00000368226 ELL2O00472 640 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-207ENST00000368226 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
PTPRK-207ENST00000368226 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
PTPRK-207ENST00000368226 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
PTPRK-207ENST00000368226 RUSC2Q8N2Y8 1516 aa16.29■□□□□ 0.2
PTPRK-207ENST00000368226 GOLGA6L6A8MZA4 724 aa16.28■□□□□ 0.2
PTPRK-207ENST00000368226 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
PTPRK-207ENST00000368226 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
PTPRK-207ENST00000368226 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
PTPRK-207ENST00000368226 GZF1Q9H116 711 aaPredicted RBP16.27■□□□□ 0.19
PTPRK-207ENST00000368226 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.19
PTPRK-207ENST00000368226 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
PTPRK-207ENST00000368226 RWDD1Q9H446 243 aaPredicted RBP16.26■□□□□ 0.19
PTPRK-207ENST00000368226 MINK1Q8N4C8 1332 aaPredicted RBP16.26■□□□□ 0.19
PTPRK-207ENST00000368226 PANK3Q9H999 370 aa16.25■□□□□ 0.19
PTPRK-207ENST00000368226 TMX4Q9H1E5 349 aaPredicted RBP16.24■□□□□ 0.19
PTPRK-207ENST00000368226 NGEFQ8N5V2 710 aa16.24■□□□□ 0.19
PTPRK-207ENST00000368226 HSP90B1P14625 803 aaKnown RBP16.23■□□□□ 0.19
PTPRK-207ENST00000368226 FANCD2Q9BXW9 1451 aa16.23■□□□□ 0.19
PTPRK-207ENST00000368226 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
PTPRK-207ENST00000368226 G3V3G9 751 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms