RNA–Protein interactions for RNA: ENST00000367309.1

PHLDA3-201, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHLDA3, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-201ENST00000367309 ARHGAP5Q13017 1502 aa34.25■■■■□ 3.07
PHLDA3-201ENST00000367309 SCAPERQ9BY12 1400 aa34.23■■■■□ 3.07
PHLDA3-201ENST00000367309 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
PHLDA3-201ENST00000367309 PREX2Q70Z35 1606 aa34.22■■■■□ 3.07
PHLDA3-201ENST00000367309 HECW2Q9P2P5 1572 aa34.21■■■■□ 3.07
PHLDA3-201ENST00000367309 CDC42BPBQ9Y5S2 1711 aa34.21■■■■□ 3.07
PHLDA3-201ENST00000367309 POGZQ7Z3K3 1410 aa34.19■■■■□ 3.06
PHLDA3-201ENST00000367309 ZMYM4Q5VZL5 1548 aa34.19■■■■□ 3.06
PHLDA3-201ENST00000367309 CDC42BPAQ5VT25 1732 aa34.16■■■■□ 3.06
PHLDA3-201ENST00000367309 EHBP1L1Q8N3D4 1523 aa34.15■■■■□ 3.06
PHLDA3-201ENST00000367309 GPATCH8Q9UKJ3 1502 aaKnown RBP34.14■■■■□ 3.06
PHLDA3-201ENST00000367309 MAGI2Q86UL8 1455 aa34.13■■■■□ 3.05
PHLDA3-201ENST00000367309 ARHGEF40Q8TER5 1519 aa34.11■■■■□ 3.05
PHLDA3-201ENST00000367309 TIAM1Q13009 1591 aa34.1■■■■□ 3.05
PHLDA3-201ENST00000367309 CCNB3Q8WWL7 1395 aa34.07■■■■□ 3.04
PHLDA3-201ENST00000367309 ZNF518AQ6AHZ1 1483 aa34.07■■■■□ 3.04
PHLDA3-201ENST00000367309 ABCC1P33527 1531 aa34.06■■■■□ 3.04
PHLDA3-201ENST00000367309 MAP3K1Q13233 1512 aa34.04■■■■□ 3.04
PHLDA3-201ENST00000367309 ZFYVE16Q7Z3T8 1539 aa34.04■■■■□ 3.04
PHLDA3-201ENST00000367309 ARHGEF12Q9NZN5 1544 aa34.03■■■■□ 3.04
PHLDA3-201ENST00000367309 YEATS2Q9ULM3 1422 aa34.03■■■■□ 3.04
PHLDA3-201ENST00000367309 KDM5CP41229 1560 aa34.02■■■■□ 3.04
PHLDA3-201ENST00000367309 AFAP1Q8N556 730 aa34.01■■■■□ 3.03
PHLDA3-201ENST00000367309 CFDP1Q9UEE9 299 aaPredicted RBP34■■■■□ 3.03
PHLDA3-201ENST00000367309 LRRC9Q6ZRR7 1453 aa33.98■■■■□ 3.03
PHLDA3-201ENST00000367309 SAMD9LQ8IVG5 1584 aa33.98■■■■□ 3.03
PHLDA3-201ENST00000367309 ITSN2Q9NZM3 1697 aa33.97■■■■□ 3.03
PHLDA3-201ENST00000367309 TRAPPC8Q9Y2L5 1435 aa33.96■■■■□ 3.03
PHLDA3-201ENST00000367309 SUPT6HQ7KZ85 1726 aaKnown RBP33.96■■■■□ 3.03
PHLDA3-201ENST00000367309 NCOA2Q15596 1464 aa33.95■■■■□ 3.03
PHLDA3-201ENST00000367309 ZNF777Q9ULD5 760 aaPredicted RBP33.95■■■■□ 3.03
PHLDA3-201ENST00000367309 KIAA1107Q9UPP5 1409 aa33.94■■■■□ 3.02
PHLDA3-201ENST00000367309 PLEKHH2Q8IVE3 1493 aa33.93■■■■□ 3.02
PHLDA3-201ENST00000367309 MLH3Q9UHC1 1453 aa33.93■■■■□ 3.02
PHLDA3-201ENST00000367309 ATP10AO60312 1499 aa33.9■■■■□ 3.02
PHLDA3-201ENST00000367309 ARID4BQ4LE39 1312 aaPredicted RBP33.89■■■■□ 3.02
PHLDA3-201ENST00000367309 SYCP2Q9BX26 1530 aa33.89■■■■□ 3.02
PHLDA3-201ENST00000367309 KANK4Q5T7N3 995 aaPredicted RBP33.88■■■■□ 3.01
PHLDA3-201ENST00000367309 ADAMTSL3P82987 1691 aa33.87■■■■□ 3.01
PHLDA3-201ENST00000367309 BCORL1Q5H9F3 1711 aa33.87■■■■□ 3.01
PHLDA3-201ENST00000367309 C9orf84Q5VXU9 1444 aa33.86■■■■□ 3.01
PHLDA3-201ENST00000367309 HNRNPMP52272 730 aaKnown RBP eCLIP33.85■■■■□ 3.01
PHLDA3-201ENST00000367309 SIGLEC1Q9BZZ2 1709 aa33.84■■■■□ 3.01
PHLDA3-201ENST00000367309 ZNF644Q9H582 1327 aaPredicted RBP33.81■■■■□ 3
PHLDA3-201ENST00000367309 DIP2CQ9Y2E4 1556 aa33.81■■■■□ 3
PHLDA3-201ENST00000367309 APLP2Q06481 763 aa33.79■■■■□ 3
PHLDA3-201ENST00000367309 REREQ9P2R6 1566 aa33.78■■■■□ 3
PHLDA3-201ENST00000367309 MYT1LQ9UL68 1186 aa33.78■■■■□ 3
PHLDA3-201ENST00000367309 ABCA6Q8N139 1617 aa33.78■■■■□ 3
PHLDA3-201ENST00000367309 KIDINS220Q9ULH0 1771 aa33.77■■■■□ 3
PHLDA3-201ENST00000367309 PTPRMP28827 1452 aa33.77■■■■□ 3
PHLDA3-201ENST00000367309 MBD5Q9P267 1494 aa33.77■■■■□ 3
PHLDA3-201ENST00000367309 SPAG9O60271 1321 aaKnown RBP33.75■■■□□ 2.99
PHLDA3-201ENST00000367309 MADDQ8WXG6 1647 aa33.73■■■□□ 2.99
PHLDA3-201ENST00000367309 CAMSAP2Q08AD1 1489 aa33.7■■■□□ 2.99
PHLDA3-201ENST00000367309 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
PHLDA3-201ENST00000367309 FBXO41Q8TF61 875 aa33.68■■■□□ 2.98
PHLDA3-201ENST00000367309 ATP7AQ04656 1500 aa33.68■■■□□ 2.98
PHLDA3-201ENST00000367309 MYOM3Q5VTT5 1437 aa33.67■■■□□ 2.98
PHLDA3-201ENST00000367309 AGLP35573 1532 aa33.67■■■□□ 2.98
PHLDA3-201ENST00000367309 MIA2Q96PC5 1412 aa33.65■■■□□ 2.98
PHLDA3-201ENST00000367309 MLECQ14165 292 aa33.64■■■□□ 2.98
PHLDA3-201ENST00000367309 RSPH4AQ5TD94 716 aa33.64■■■□□ 2.98
PHLDA3-201ENST00000367309 CCDC141Q6ZP82 1450 aa33.62■■■□□ 2.97
PHLDA3-201ENST00000367309 RTEL1-TNFRSF6BF6WH68 1400 aa33.62■■■□□ 2.97
PHLDA3-201ENST00000367309 RIMS1Q86UR5 1692 aaKnown RBP33.6■■■□□ 2.97
PHLDA3-201ENST00000367309 ARHGEF5Q12774 1597 aa33.6■■■□□ 2.97
PHLDA3-201ENST00000367309 FER1L4A9Z1Z3 1794 aa33.55■■■□□ 2.96
PHLDA3-201ENST00000367309 A2MP01023 1474 aa33.54■■■□□ 2.96
PHLDA3-201ENST00000367309 PLXNC1O60486 1568 aa33.54■■■□□ 2.96
PHLDA3-201ENST00000367309 LMTK3Q96Q04 1460 aa33.5■■■□□ 2.95
PHLDA3-201ENST00000367309 ADGBQ8N7X0 1667 aa33.49■■■□□ 2.95
PHLDA3-201ENST00000367309 TSPY4P0CV99 314 aa33.47■■■□□ 2.95
PHLDA3-201ENST00000367309 TSPY10P0CW01 314 aa33.47■■■□□ 2.95
PHLDA3-201ENST00000367309 FGD6Q6ZV73 1430 aa33.45■■■□□ 2.95
PHLDA3-201ENST00000367309 DHX29Q7Z478 1369 aaKnown RBP33.43■■■□□ 2.94
PHLDA3-201ENST00000367309 PTPN23Q9H3S7 1636 aa33.42■■■□□ 2.94
PHLDA3-201ENST00000367309 MAST1Q9Y2H9 1570 aa33.42■■■□□ 2.94
PHLDA3-201ENST00000367309 TCOF1Q13428 1488 aaKnown RBP33.41■■■□□ 2.94
PHLDA3-201ENST00000367309 CNTLNQ9NXG0 1405 aa33.37■■■□□ 2.93
PHLDA3-201ENST00000367309 ESF1Q9H501 851 aaKnown RBP33.35■■■□□ 2.93
PHLDA3-201ENST00000367309 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
PHLDA3-201ENST00000367309 ABCC5O15440 1437 aa33.33■■■□□ 2.93
PHLDA3-201ENST00000367309 CEBPAP49715 358 aaPredicted RBP33.32■■■□□ 2.92
PHLDA3-201ENST00000367309 SHANK2Q9UPX8 1470 aa33.31■■■□□ 2.92
PHLDA3-201ENST00000367309 PPP6R1Q9UPN7 881 aa33.31■■■□□ 2.92
PHLDA3-201ENST00000367309 GGT6Q6P531 493 aa33.28■■■□□ 2.92
PHLDA3-201ENST00000367309 DNMT1P26358 1616 aaKnown RBP33.28■■■□□ 2.92
PHLDA3-201ENST00000367309 DAPK1P53355 1430 aa33.28■■■□□ 2.92
PHLDA3-201ENST00000367309 CROCC2H7BZ55 1655 aa33.26■■■□□ 2.92
PHLDA3-201ENST00000367309 C3P01024 1663 aa33.26■■■□□ 2.92
PHLDA3-201ENST00000367309 MROH2AA6NES4 1674 aa33.26■■■□□ 2.91
PHLDA3-201ENST00000367309 HSPA2P54652 639 aa33.25■■■□□ 2.91
PHLDA3-201ENST00000367309 KIF3BO15066 747 aa33.24■■■□□ 2.91
PHLDA3-201ENST00000367309 ZMYM3Q14202 1370 aa33.21■■■□□ 2.91
PHLDA3-201ENST00000367309 SETD1BQ9UPS6 1966 aaKnown RBP33.21■■■□□ 2.91
PHLDA3-201ENST00000367309 CLTCQ00610 1675 aaKnown RBP33.19■■■□□ 2.9
PHLDA3-201ENST00000367309 DUOX2Q9NRD8 1548 aa33.18■■■□□ 2.9
PHLDA3-201ENST00000367309 FAM135AQ9P2D6 1515 aa33.18■■■□□ 2.9
PHLDA3-201ENST00000367309 PREX1Q8TCU6 1659 aa33.17■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms