RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 PLCH2O75038 1416 aa14.86□□□□□ -0.03
MRPL55-216ENST00000366744 ZMYM4Q5VZL5 1548 aa14.85□□□□□ -0.03
MRPL55-216ENST00000366744 MTUS2Q5JR59 1369 aa14.85□□□□□ -0.03
MRPL55-216ENST00000366744 SUPT6HQ7KZ85 1726 aaKnown RBP14.84□□□□□ -0.03
MRPL55-216ENST00000366744 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.03
MRPL55-216ENST00000366744 TIAM1Q13009 1591 aa14.82□□□□□ -0.04
MRPL55-216ENST00000366744 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
MRPL55-216ENST00000366744 LOC105371045A0A1W2PR82 267 aa14.81□□□□□ -0.04
MRPL55-216ENST00000366744 EFCAB2Q5VUJ9 269 aa14.81□□□□□ -0.04
MRPL55-216ENST00000366744 POGZQ7Z3K3 1410 aa14.81□□□□□ -0.04
MRPL55-216ENST00000366744 ZNF518AQ6AHZ1 1483 aa14.8□□□□□ -0.04
MRPL55-216ENST00000366744 ABCC1P33527 1531 aa14.8□□□□□ -0.04
MRPL55-216ENST00000366744 HECW2Q9P2P5 1572 aa14.79□□□□□ -0.04
MRPL55-216ENST00000366744 MAGI2Q86UL8 1455 aa14.78□□□□□ -0.04
MRPL55-216ENST00000366744 SCAPERQ9BY12 1400 aa14.78□□□□□ -0.04
MRPL55-216ENST00000366744 RAPGEF3O95398 923 aa14.78□□□□□ -0.04
MRPL55-216ENST00000366744 CCNB3Q8WWL7 1395 aa14.76□□□□□ -0.05
MRPL55-216ENST00000366744 KDM5CP41229 1560 aa14.76□□□□□ -0.05
MRPL55-216ENST00000366744 SAMD9LQ8IVG5 1584 aa14.75□□□□□ -0.05
MRPL55-216ENST00000366744 BCORL1Q5H9F3 1711 aa14.75□□□□□ -0.05
MRPL55-216ENST00000366744 PLEKHH2Q8IVE3 1493 aa14.74□□□□□ -0.05
MRPL55-216ENST00000366744 SYCP2Q9BX26 1530 aa14.73□□□□□ -0.05
MRPL55-216ENST00000366744 MAP3K1Q13233 1512 aa14.72□□□□□ -0.05
MRPL55-216ENST00000366744 GPATCH8Q9UKJ3 1502 aaKnown RBP14.71□□□□□ -0.05
MRPL55-216ENST00000366744 FER1L4A9Z1Z3 1794 aa14.71□□□□□ -0.05
MRPL55-216ENST00000366744 MYT1LQ9UL68 1186 aa14.71□□□□□ -0.05
MRPL55-216ENST00000366744 ARID4BQ4LE39 1312 aaPredicted RBP14.7□□□□□ -0.06
MRPL55-216ENST00000366744 ADAMTSL3P82987 1691 aa14.7□□□□□ -0.06
MRPL55-216ENST00000366744 ABCA6Q8N139 1617 aa14.7□□□□□ -0.06
MRPL55-216ENST00000366744 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
MRPL55-216ENST00000366744 KDM4FA0A1W2PPD8 638 aa14.69□□□□□ -0.06
MRPL55-216ENST00000366744 APLP2Q06481 763 aa14.69□□□□□ -0.06
MRPL55-216ENST00000366744 ZNF777Q9ULD5 760 aaPredicted RBP14.69□□□□□ -0.06
MRPL55-216ENST00000366744 MADDQ8WXG6 1647 aa14.69□□□□□ -0.06
MRPL55-216ENST00000366744 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
MRPL55-216ENST00000366744 DIP2CQ9Y2E4 1556 aa14.68□□□□□ -0.06
MRPL55-216ENST00000366744 RIMS1Q86UR5 1692 aaKnown RBP14.68□□□□□ -0.06
MRPL55-216ENST00000366744 C9orf84Q5VXU9 1444 aa14.68□□□□□ -0.06
MRPL55-216ENST00000366744 YEATS2Q9ULM3 1422 aa14.68□□□□□ -0.06
MRPL55-216ENST00000366744 CFDP1Q9UEE9 299 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-216ENST00000366744 KIDINS220Q9ULH0 1771 aa14.67□□□□□ -0.06
MRPL55-216ENST00000366744 REREQ9P2R6 1566 aa14.66□□□□□ -0.06
MRPL55-216ENST00000366744 INO80Q9ULG1 1556 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-216ENST00000366744 SIGLEC1Q9BZZ2 1709 aa14.66□□□□□ -0.06
MRPL55-216ENST00000366744 ADGBQ8N7X0 1667 aa14.65□□□□□ -0.06
MRPL55-216ENST00000366744 ATP10AO60312 1499 aa14.65□□□□□ -0.06
MRPL55-216ENST00000366744 MLH3Q9UHC1 1453 aa14.65□□□□□ -0.06
MRPL55-216ENST00000366744 ATP7AQ04656 1500 aa14.65□□□□□ -0.06
MRPL55-216ENST00000366744 CAMSAP2Q08AD1 1489 aa14.64□□□□□ -0.07
MRPL55-216ENST00000366744 ARHGEF12Q9NZN5 1544 aa14.64□□□□□ -0.07
MRPL55-216ENST00000366744 KIAA1107Q9UPP5 1409 aa14.64□□□□□ -0.07
MRPL55-216ENST00000366744 TRAPPC8Q9Y2L5 1435 aa14.64□□□□□ -0.07
MRPL55-216ENST00000366744 AFAP1Q8N556 730 aa14.61□□□□□ -0.07
MRPL55-216ENST00000366744 SPAG9O60271 1321 aaKnown RBP14.6□□□□□ -0.07
MRPL55-216ENST00000366744 CCDC141Q6ZP82 1450 aa14.59□□□□□ -0.07
MRPL55-216ENST00000366744 ARHGEF5Q12774 1597 aa14.59□□□□□ -0.07
MRPL55-216ENST00000366744 PTPRMP28827 1452 aa14.58□□□□□ -0.08
MRPL55-216ENST00000366744 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
MRPL55-216ENST00000366744 AGLP35573 1532 aa14.57□□□□□ -0.08
MRPL55-216ENST00000366744 CROCC2H7BZ55 1655 aa14.57□□□□□ -0.08
MRPL55-216ENST00000366744 HNRNPMP52272 730 aaKnown RBP eCLIP14.56□□□□□ -0.08
MRPL55-216ENST00000366744 MIA2Q96PC5 1412 aa14.55□□□□□ -0.08
MRPL55-216ENST00000366744 PLXNC1O60486 1568 aa14.55□□□□□ -0.08
MRPL55-216ENST00000366744 PTPN23Q9H3S7 1636 aa14.55□□□□□ -0.08
MRPL55-216ENST00000366744 MLECQ14165 292 aa14.54□□□□□ -0.08
MRPL55-216ENST00000366744 MROH2AA6NES4 1674 aa14.53□□□□□ -0.08
MRPL55-216ENST00000366744 MBD5Q9P267 1494 aa14.53□□□□□ -0.08
MRPL55-216ENST00000366744 A2MP01023 1474 aa14.52□□□□□ -0.08
MRPL55-216ENST00000366744 ZNF644Q9H582 1327 aaPredicted RBP14.52□□□□□ -0.08
MRPL55-216ENST00000366744 ESF1Q9H501 851 aaKnown RBP14.52□□□□□ -0.09
MRPL55-216ENST00000366744 PREX1Q8TCU6 1659 aa14.52□□□□□ -0.09
MRPL55-216ENST00000366744 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
MRPL55-216ENST00000366744 RTEL1-TNFRSF6BF6WH68 1400 aa14.51□□□□□ -0.09
MRPL55-216ENST00000366744 KANK4Q5T7N3 995 aaPredicted RBP14.51□□□□□ -0.09
MRPL55-216ENST00000366744 C3P01024 1663 aa14.5□□□□□ -0.09
MRPL55-216ENST00000366744 RSPH4AQ5TD94 716 aa14.5□□□□□ -0.09
MRPL55-216ENST00000366744 CLTCQ00610 1675 aaKnown RBP14.49□□□□□ -0.09
MRPL55-216ENST00000366744 DNMT1P26358 1616 aaKnown RBP14.48□□□□□ -0.09
MRPL55-216ENST00000366744 FGD6Q6ZV73 1430 aa14.48□□□□□ -0.09
MRPL55-216ENST00000366744 CNTLNQ9NXG0 1405 aa14.48□□□□□ -0.09
MRPL55-216ENST00000366744 EIF2AK4Q9P2K8 1649 aaKnown RBP14.47□□□□□ -0.09
MRPL55-216ENST00000366744 SHANK2Q9UPX8 1470 aa14.46□□□□□ -0.09
MRPL55-216ENST00000366744 TSPY4P0CV99 314 aa14.46□□□□□ -0.09
MRPL55-216ENST00000366744 TSPY10P0CW01 314 aa14.46□□□□□ -0.09
MRPL55-216ENST00000366744 PLPPR3Q6T4P5 718 aa14.46□□□□□ -0.09
MRPL55-216ENST00000366744 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
MRPL55-216ENST00000366744 FAM135AQ9P2D6 1515 aa14.45□□□□□ -0.1
MRPL55-216ENST00000366744 ZC3H13Q5T200 1668 aaKnown RBP14.44□□□□□ -0.1
MRPL55-216ENST00000366744 TCOF1Q13428 1488 aaKnown RBP14.44□□□□□ -0.1
MRPL55-216ENST00000366744 RNF17Q9BXT8 1623 aaKnown RBP14.42□□□□□ -0.1
MRPL55-216ENST00000366744 KDM5DQ9BY66 1539 aa14.41□□□□□ -0.1
MRPL55-216ENST00000366744 LMTK3Q96Q04 1460 aa14.4□□□□□ -0.1
MRPL55-216ENST00000366744 DHX29Q7Z478 1369 aaKnown RBP14.4□□□□□ -0.1
MRPL55-216ENST00000366744 DUOX2Q9NRD8 1548 aa14.4□□□□□ -0.1
MRPL55-216ENST00000366744 DAPK1P53355 1430 aa14.4□□□□□ -0.1
MRPL55-216ENST00000366744 UHRF1BP1Q6BDS2 1440 aa14.38□□□□□ -0.11
MRPL55-216ENST00000366744 MYO3AQ8NEV4 1616 aa14.37□□□□□ -0.11
MRPL55-216ENST00000366744 GGT6Q6P531 493 aa14.37□□□□□ -0.11
MRPL55-216ENST00000366744 CEP152O94986 1710 aa14.37□□□□□ -0.11
MRPL55-216ENST00000366744 ZNF142P52746 1687 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms