RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 MPHOSPH9Q99550 1183 aa24.71■■□□□ 1.55
TRIM11-202ENST00000366699 CFDP1Q9UEE9 299 aaPredicted RBP24.7■■□□□ 1.54
TRIM11-202ENST00000366699 ITSN2Q9NZM3 1697 aa24.68■■□□□ 1.54
TRIM11-202ENST00000366699 ADCY10Q96PN6 1610 aa24.67■■□□□ 1.54
TRIM11-202ENST00000366699 ZNF644Q9H582 1327 aaPredicted RBP24.66■■□□□ 1.54
TRIM11-202ENST00000366699 KDM6BO15054 1643 aa24.66■■□□□ 1.54
TRIM11-202ENST00000366699 KCNH8Q96L42 1107 aa24.66■■□□□ 1.54
TRIM11-202ENST00000366699 PLEKHD1A6NEE1 506 aa24.65■■□□□ 1.54
TRIM11-202ENST00000366699 GPATCH8Q9UKJ3 1502 aaKnown RBP24.65■■□□□ 1.54
TRIM11-202ENST00000366699 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.54
TRIM11-202ENST00000366699 CAMSAP2Q08AD1 1489 aa24.64■■□□□ 1.53
TRIM11-202ENST00000366699 HIRIP3Q9BW71 556 aaPredicted RBP24.63■■□□□ 1.53
TRIM11-202ENST00000366699 ABCA8O94911 1581 aa24.62■■□□□ 1.53
TRIM11-202ENST00000366699 SUPT16HQ9Y5B9 1047 aaKnown RBP24.61■■□□□ 1.53
TRIM11-202ENST00000366699 CCER2I3L3R5 266 aa24.6■■□□□ 1.53
TRIM11-202ENST00000366699 KDM5BQ9UGL1 1544 aa24.6■■□□□ 1.53
TRIM11-202ENST00000366699 ANP32CO43423 234 aa24.59■■□□□ 1.53
TRIM11-202ENST00000366699 KIF14Q15058 1648 aa24.56■■□□□ 1.52
TRIM11-202ENST00000366699 ATP10BO94823 1461 aa24.55■■□□□ 1.52
TRIM11-202ENST00000366699 ZNF777Q9ULD5 760 aaPredicted RBP24.55■■□□□ 1.52
TRIM11-202ENST00000366699 NCOA1Q15788 1441 aa24.55■■□□□ 1.52
TRIM11-202ENST00000366699 ADGRL2O95490 1459 aa24.54■■□□□ 1.52
TRIM11-202ENST00000366699 MYT1Q01538 1121 aa24.54■■□□□ 1.52
TRIM11-202ENST00000366699 SLC4A1APQ9BWU0 796 aaKnown RBP24.54■■□□□ 1.52
TRIM11-202ENST00000366699 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
TRIM11-202ENST00000366699 PTPRGP23470 1445 aa24.53■■□□□ 1.52
TRIM11-202ENST00000366699 ANKRD30AQ9BXX3 1397 aa24.53■■□□□ 1.52
TRIM11-202ENST00000366699 ADGBQ8N7X0 1667 aa24.51■■□□□ 1.51
TRIM11-202ENST00000366699 RPRD2Q5VT52 1461 aaKnown RBP24.5■■□□□ 1.51
TRIM11-202ENST00000366699 ABCC10Q5T3U5 1492 aa24.49■■□□□ 1.51
TRIM11-202ENST00000366699 L3MBTL2Q969R5 705 aa24.49■■□□□ 1.51
TRIM11-202ENST00000366699 FOXD1Q16676 465 aa24.48■■□□□ 1.51
TRIM11-202ENST00000366699 EIF4G2P78344 907 aaKnown RBP eCLIP24.47■■□□□ 1.51
TRIM11-202ENST00000366699 CROCC2H7BZ55 1655 aa24.46■■□□□ 1.51
TRIM11-202ENST00000366699 SHANK2Q9UPX8 1470 aa24.45■■□□□ 1.5
TRIM11-202ENST00000366699 HSPA5P11021 654 aaKnown RBP24.43■■□□□ 1.5
TRIM11-202ENST00000366699 PZPP20742 1482 aa24.42■■□□□ 1.5
TRIM11-202ENST00000366699 TSPY4P0CV99 314 aa24.41■■□□□ 1.5
TRIM11-202ENST00000366699 TSPY10P0CW01 314 aa24.41■■□□□ 1.5
TRIM11-202ENST00000366699 ANKRD50Q9ULJ7 1429 aa24.4■■□□□ 1.5
TRIM11-202ENST00000366699 CDC42BPAQ5VT25 1732 aa24.4■■□□□ 1.5
TRIM11-202ENST00000366699 C9orf84Q5VXU9 1444 aa24.39■■□□□ 1.49
TRIM11-202ENST00000366699 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
TRIM11-202ENST00000366699 KIAA1107Q9UPP5 1409 aa24.38■■□□□ 1.49
TRIM11-202ENST00000366699 CHD1O14646 1710 aa24.37■■□□□ 1.49
TRIM11-202ENST00000366699 RSPH4AQ5TD94 716 aa24.35■■□□□ 1.49
TRIM11-202ENST00000366699 SHROOM2Q13796 1616 aa24.33■■□□□ 1.49
TRIM11-202ENST00000366699 ARHGEF5Q12774 1597 aa24.33■■□□□ 1.49
TRIM11-202ENST00000366699 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
TRIM11-202ENST00000366699 PKD2Q13563 968 aa24.31■■□□□ 1.48
TRIM11-202ENST00000366699 NUP155O75694 1391 aa24.28■■□□□ 1.48
TRIM11-202ENST00000366699 NBPF8Q3BBV2 869 aa24.28■■□□□ 1.48
TRIM11-202ENST00000366699 HNRNPMP52272 730 aaKnown RBP eCLIP24.27■■□□□ 1.48
TRIM11-202ENST00000366699 MBD5Q9P267 1494 aa24.27■■□□□ 1.48
TRIM11-202ENST00000366699 CCDC141Q6ZP82 1450 aa24.26■■□□□ 1.47
TRIM11-202ENST00000366699 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
TRIM11-202ENST00000366699 PREX2Q70Z35 1606 aa24.25■■□□□ 1.47
TRIM11-202ENST00000366699 KDM5DQ9BY66 1539 aa24.25■■□□□ 1.47
TRIM11-202ENST00000366699 FKBP8Q14318 412 aa24.24■■□□□ 1.47
TRIM11-202ENST00000366699 ABCC2Q92887 1545 aa24.23■■□□□ 1.47
TRIM11-202ENST00000366699 NEFLP07196 543 aa24.23■■□□□ 1.47
TRIM11-202ENST00000366699 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
TRIM11-202ENST00000366699 CCDC7Q96M83 1385 aa24.22■■□□□ 1.47
TRIM11-202ENST00000366699 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
TRIM11-202ENST00000366699 POLR1AO95602 1720 aaPredicted RBP24.2■■□□□ 1.46
TRIM11-202ENST00000366699 SPATA31E1Q6ZUB1 1445 aa24.2■■□□□ 1.46
TRIM11-202ENST00000366699 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
TRIM11-202ENST00000366699 CDC42BPBQ9Y5S2 1711 aa24.17■■□□□ 1.46
TRIM11-202ENST00000366699 ARHGAP5Q13017 1502 aa24.17■■□□□ 1.46
TRIM11-202ENST00000366699 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
TRIM11-202ENST00000366699 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.15■■□□□ 1.463e-6■■□□□ 12.2
TRIM11-202ENST00000366699 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
TRIM11-202ENST00000366699 ARHGEF12Q9NZN5 1544 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 BCANQ96GW7 911 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 TSHZ2Q9NRE2 1034 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 MAST1Q9Y2H9 1570 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 TTC37Q6PGP7 1564 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 UHRF1BP1Q6BDS2 1440 aa24.12■■□□□ 1.45
TRIM11-202ENST00000366699 HNRNPUQ00839 825 aaKnown RBP eCLIP24.11■■□□□ 1.45
TRIM11-202ENST00000366699 UHRF1BP1LA0JNW5 1464 aa24.11■■□□□ 1.45
TRIM11-202ENST00000366699 SYCP2Q9BX26 1530 aa24.11■■□□□ 1.45
TRIM11-202ENST00000366699 CLASP1Q7Z460 1538 aa24.1■■□□□ 1.45
TRIM11-202ENST00000366699 KIF7Q2M1P5 1343 aa24.1■■□□□ 1.45
TRIM11-202ENST00000366699 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.45
TRIM11-202ENST00000366699 USP47Q96K76 1375 aa24.08■■□□□ 1.44
TRIM11-202ENST00000366699 ARID4BQ4LE39 1312 aaPredicted RBP24.08■■□□□ 1.44
TRIM11-202ENST00000366699 PRKRIP1Q9H875 184 aaPredicted RBP24.07■■□□□ 1.44
TRIM11-202ENST00000366699 MYO5CQ9NQX4 1742 aa24.07■■□□□ 1.44
TRIM11-202ENST00000366699 FAM135AQ9P2D6 1515 aa24.06■■□□□ 1.44
TRIM11-202ENST00000366699 RALGAPBQ86X10 1494 aa24.05■■□□□ 1.44
TRIM11-202ENST00000366699 PLCH2O75038 1416 aa24.04■■□□□ 1.44
TRIM11-202ENST00000366699 EFCAB2Q5VUJ9 269 aa24.03■■□□□ 1.44
TRIM11-202ENST00000366699 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
TRIM11-202ENST00000366699 ZCCHC11Q5TAX3 1644 aaKnown RBP24■■□□□ 1.43
TRIM11-202ENST00000366699 UNC13BO14795 1591 aa23.99■■□□□ 1.43
TRIM11-202ENST00000366699 CCDC144AA2RUR9 1427 aa23.99■■□□□ 1.43
TRIM11-202ENST00000366699 CARD11Q9BXL7 1154 aa23.99■■□□□ 1.43
TRIM11-202ENST00000366699 DUOX2Q9NRD8 1548 aa23.98■■□□□ 1.43
TRIM11-202ENST00000366699 KDM5CP41229 1560 aa23.98■■□□□ 1.43
TRIM11-202ENST00000366699 DCAF11Q8TEB1 546 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms