RNA–Protein interactions for RNA: ENST00000366576.3

MTR-201, Transcript of 5-methyltetrahydrofolate-homocysteine methyltransferase, humanhuman

TSL 1 (best)

Gene MTR, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTR-201ENST00000366576 KTN1Q86UP2 1357 aaKnown RBP13.68□□□□□ -0.22
MTR-201ENST00000366576 CALD1Q05682 793 aaKnown RBP13.67□□□□□ -0.22
MTR-201ENST00000366576 PKD2Q13563 968 aa13.67□□□□□ -0.22
MTR-201ENST00000366576 NACADO15069 1562 aa13.67□□□□□ -0.22
MTR-201ENST00000366576 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
MTR-201ENST00000366576 MSNP26038 577 aaKnown RBP13.67□□□□□ -0.22
MTR-201ENST00000366576 SOX12O15370 315 aa13.67□□□□□ -0.22
MTR-201ENST00000366576 CHMP4AQ9BY43 222 aa13.67□□□□□ -0.22
MTR-201ENST00000366576 KIAA1211Q6ZU35 1233 aa13.65□□□□□ -0.22
MTR-201ENST00000366576 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
MTR-201ENST00000366576 RALBP1Q15311 655 aa13.65□□□□□ -0.22
MTR-201ENST00000366576 SAFB2Q14151 953 aaKnown RBP eCLIP13.65□□□□□ -0.23
MTR-201ENST00000366576 CUX2O14529 1486 aa13.64□□□□□ -0.23
MTR-201ENST00000366576 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
MTR-201ENST00000366576 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
MTR-201ENST00000366576 RBM19Q9Y4C8 960 aaKnown RBP13.64□□□□□ -0.23
MTR-201ENST00000366576 GGT6Q6P531 493 aa13.64□□□□□ -0.23
MTR-201ENST00000366576 BAZ1AQ9NRL2 1556 aaPredicted RBP13.63□□□□□ -0.23
MTR-201ENST00000366576 U2AF1L5P0DN76 240 aaPredicted RBP13.63□□□□□ -0.23
MTR-201ENST00000366576 U2AF1Q01081 240 aaKnown RBP eCLIP13.63□□□□□ -0.23
MTR-201ENST00000366576 VPS8Q8N3P4 1428 aa13.63□□□□□ -0.23
MTR-201ENST00000366576 PTMSP20962 102 aa13.63□□□□□ -0.23
MTR-201ENST00000366576 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
MTR-201ENST00000366576 MLECQ14165 292 aa13.62□□□□□ -0.23
MTR-201ENST00000366576 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
MTR-201ENST00000366576 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
MTR-201ENST00000366576 DRC7Q8IY82 874 aa13.6□□□□□ -0.23
MTR-201ENST00000366576 STK26Q9P289 416 aa13.6□□□□□ -0.23
MTR-201ENST00000366576 DEKP35659 375 aaKnown RBP13.59□□□□□ -0.23
MTR-201ENST00000366576 SPRYD3Q8NCJ5 442 aa13.59□□□□□ -0.23
MTR-201ENST00000366576 SOGA1O94964 1423 aa13.58□□□□□ -0.23
MTR-201ENST00000366576 HDAC5Q9UQL6 1122 aa13.58□□□□□ -0.23
MTR-201ENST00000366576 APBB1O00213 710 aa13.58□□□□□ -0.24
MTR-201ENST00000366576 GNL2Q13823 731 aaKnown RBP13.58□□□□□ -0.24
MTR-201ENST00000366576 EFCAB2Q5VUJ9 269 aa13.58□□□□□ -0.24
MTR-201ENST00000366576 MPHOSPH9Q99550 1183 aa13.58□□□□□ -0.24
MTR-201ENST00000366576 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
MTR-201ENST00000366576 EIF4G1Q04637 1599 aaKnown RBP13.57□□□□□ -0.24
MTR-201ENST00000366576 NUP155O75694 1391 aa13.57□□□□□ -0.24
MTR-201ENST00000366576 CARMIL2Q6F5E8 1435 aa13.57□□□□□ -0.24
MTR-201ENST00000366576 ROCK2O75116 1388 aaKnown RBP13.57□□□□□ -0.24
MTR-201ENST00000366576 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
MTR-201ENST00000366576 PMFBP1Q8TBY8 1022 aa13.57□□□□□ -0.24
MTR-201ENST00000366576 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
MTR-201ENST00000366576 STK31Q9BXU1 1019 aa13.56□□□□□ -0.24
MTR-201ENST00000366576 FOXD1Q16676 465 aa13.55□□□□□ -0.24
MTR-201ENST00000366576 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
MTR-201ENST00000366576 SYAP1Q96A49 352 aaPredicted RBP13.55□□□□□ -0.24
MTR-201ENST00000366576 ANKRD30AQ9BXX3 1397 aa13.54□□□□□ -0.24
MTR-201ENST00000366576 PDE3BQ13370 1112 aa13.54□□□□□ -0.24
MTR-201ENST00000366576 HMMRO75330 724 aa13.54□□□□□ -0.24
MTR-201ENST00000366576 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
MTR-201ENST00000366576 SPAG9O60271 1321 aaKnown RBP13.53□□□□□ -0.24
MTR-201ENST00000366576 RAB3GAP2Q9H2M9 1393 aa13.53□□□□□ -0.24
MTR-201ENST00000366576 SLKQ9H2G2 1235 aaPredicted RBP13.53□□□□□ -0.24
MTR-201ENST00000366576 ISY1Q9ULR0 285 aaKnown RBP13.53□□□□□ -0.24
MTR-201ENST00000366576 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
MTR-201ENST00000366576 TERF2IPQ9NYB0 399 aa13.53□□□□□ -0.24
MTR-201ENST00000366576 EIF3AQ14152 1382 aaKnown RBP13.52□□□□□ -0.24
MTR-201ENST00000366576 TRHP20396 242 aaPredicted RBP13.52□□□□□ -0.25
MTR-201ENST00000366576 CCDC34Q96HJ3 373 aa13.52□□□□□ -0.25
MTR-201ENST00000366576 PAK3O75914 559 aaPredicted RBP13.52□□□□□ -0.25
MTR-201ENST00000366576 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
MTR-201ENST00000366576 CSB-PGBD3P0DP91 1061 aa13.51□□□□□ -0.25
MTR-201ENST00000366576 RSPH4AQ5TD94 716 aa13.5□□□□□ -0.25
MTR-201ENST00000366576 CECR2Q9BXF3 1484 aa13.5□□□□□ -0.25
MTR-201ENST00000366576 GPATCH3Q96I76 525 aa13.49□□□□□ -0.25
MTR-201ENST00000366576 CLSTN1O94985 981 aa13.49□□□□□ -0.25
MTR-201ENST00000366576 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
MTR-201ENST00000366576 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
MTR-201ENST00000366576 L3MBTL2Q969R5 705 aa13.48□□□□□ -0.25
MTR-201ENST00000366576 GZF1Q9H116 711 aaPredicted RBP13.48□□□□□ -0.25
MTR-201ENST00000366576 KIF3BO15066 747 aa13.47□□□□□ -0.25
MTR-201ENST00000366576 ZNF330Q9Y3S2 320 aaPredicted RBP13.47□□□□□ -0.25
MTR-201ENST00000366576 MFAP1P55081 439 aaKnown RBP13.47□□□□□ -0.25
MTR-201ENST00000366576 CENPJQ9HC77 1338 aaPredicted RBP13.46□□□□□ -0.25
MTR-201ENST00000366576 TPM4P67936 248 aa13.46□□□□□ -0.25
MTR-201ENST00000366576 IPO9Q96P70 1041 aaKnown RBP13.46□□□□□ -0.25
MTR-201ENST00000366576 CSPP1Q1MSJ5 1256 aa13.46□□□□□ -0.26
MTR-201ENST00000366576 CLUAP1Q96AJ1 413 aa13.46□□□□□ -0.26
MTR-201ENST00000366576 PHLDB1Q86UU1 1377 aa13.45□□□□□ -0.26
MTR-201ENST00000366576 TRIM6-TRIM34B2RNG4 842 aa13.45□□□□□ -0.26
MTR-201ENST00000366576 GOLGA6L3A6NEY3 463 aa13.45□□□□□ -0.26
MTR-201ENST00000366576 TAF7LQ5H9L4 462 aa13.44□□□□□ -0.26
MTR-201ENST00000366576 KIF3AQ9Y496 699 aa13.43□□□□□ -0.26
MTR-201ENST00000366576 SLC4A10Q6U841 1118 aa13.42□□□□□ -0.26
MTR-201ENST00000366576 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
MTR-201ENST00000366576 TDRD9Q8NDG6 1382 aaKnown RBP13.42□□□□□ -0.26
MTR-201ENST00000366576 ST18O60284 1047 aa13.41□□□□□ -0.26
MTR-201ENST00000366576 NGDNQ8NEJ9 315 aaKnown RBP13.41□□□□□ -0.26
MTR-201ENST00000366576 TMX4Q9H1E5 349 aaPredicted RBP13.41□□□□□ -0.26
MTR-201ENST00000366576 CHMP3Q9Y3E7 222 aa13.41□□□□□ -0.26
MTR-201ENST00000366576 EID1Q9Y6B2 187 aa13.41□□□□□ -0.26
MTR-201ENST00000366576 AMPHP49418 695 aa13.4□□□□□ -0.26
MTR-201ENST00000366576 CCDC146Q8IYE0 955 aa13.39□□□□□ -0.27
MTR-201ENST00000366576 TSHZ2Q9NRE2 1034 aa13.39□□□□□ -0.27
MTR-201ENST00000366576 WASHC2CQ9Y4E1 1318 aa13.39□□□□□ -0.27
MTR-201ENST00000366576 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
MTR-201ENST00000366576 PHF14O94880 888 aa13.38□□□□□ -0.27
MTR-201ENST00000366576 HNRNPMP52272 730 aaKnown RBP eCLIP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms