RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 EHBP1L1Q8N3D4 1523 aa26.89■■□□□ 1.89
TRIM58-201ENST00000366481 NBPF8Q3BBV2 869 aa26.88■■□□□ 1.89
TRIM58-201ENST00000366481 UGGT2Q9NYU1 1516 aa26.87■■□□□ 1.89
TRIM58-201ENST00000366481 DENND4BO75064 1496 aaPredicted RBP26.87■■□□□ 1.89
TRIM58-201ENST00000366481 EPRSP07814 1512 aaKnown RBP26.86■■□□□ 1.89
TRIM58-201ENST00000366481 KIF21AQ7Z4S6 1674 aa26.86■■□□□ 1.89
TRIM58-201ENST00000366481 RTL5Q5HYW3 569 aaPredicted RBP26.85■■□□□ 1.89
TRIM58-201ENST00000366481 NOP58Q9Y2X3 529 aaKnown RBP26.84■■□□□ 1.89
TRIM58-201ENST00000366481 ERCC6Q03468 1493 aa26.84■■□□□ 1.89
TRIM58-201ENST00000366481 KDM5BQ9UGL1 1544 aa26.83■■□□□ 1.89
TRIM58-201ENST00000366481 CHMP7Q8WUX9 453 aaPredicted RBP26.82■■□□□ 1.88
TRIM58-201ENST00000366481 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
TRIM58-201ENST00000366481 ZNF608Q9ULD9 1512 aaPredicted RBP26.81■■□□□ 1.88
TRIM58-201ENST00000366481 MRS2Q9HD23 443 aa26.79■■□□□ 1.88
TRIM58-201ENST00000366481 ANO8Q9HCE9 1232 aaPredicted RBP26.76■■□□□ 1.87
TRIM58-201ENST00000366481 PAK3O75914 559 aaPredicted RBP26.75■■□□□ 1.87
TRIM58-201ENST00000366481 TARBP1Q13395 1621 aaKnown RBP26.74■■□□□ 1.87
TRIM58-201ENST00000366481 IQGAP2Q13576 1575 aa26.73■■□□□ 1.87
TRIM58-201ENST00000366481 CFDP1Q9UEE9 299 aaPredicted RBP26.72■■□□□ 1.87
TRIM58-201ENST00000366481 RTN4Q9NQC3 1192 aaKnown RBP26.71■■□□□ 1.87
TRIM58-201ENST00000366481 ARHGEF11O15085 1522 aa26.7■■□□□ 1.87
TRIM58-201ENST00000366481 ANP32AP39687 249 aaKnown RBP26.7■■□□□ 1.87
TRIM58-201ENST00000366481 PRKRIP1Q9H875 184 aaPredicted RBP26.7■■□□□ 1.87
TRIM58-201ENST00000366481 HECW1Q76N89 1606 aa26.68■■□□□ 1.86
TRIM58-201ENST00000366481 PRG4Q92954 1404 aaPredicted RBP26.67■■□□□ 1.86
TRIM58-201ENST00000366481 TCOF1Q13428 1488 aaKnown RBP26.66■■□□□ 1.86
TRIM58-201ENST00000366481 CCDC7Q96M83 1385 aa26.66■■□□□ 1.86
TRIM58-201ENST00000366481 ABCC5O15440 1437 aa26.66■■□□□ 1.86
TRIM58-201ENST00000366481 KIF7Q2M1P5 1343 aa26.65■■□□□ 1.86
TRIM58-201ENST00000366481 DAPK1P53355 1430 aa26.65■■□□□ 1.86
TRIM58-201ENST00000366481 ERICH6BQ5W0A0 696 aa26.64■■□□□ 1.86
TRIM58-201ENST00000366481 ANKRD30BQ9BXX2 1392 aa26.64■■□□□ 1.86
TRIM58-201ENST00000366481 ZBTB47Q9UFB7 747 aaPredicted RBP26.64■■□□□ 1.85
TRIM58-201ENST00000366481 KDM2AQ9Y2K7 1162 aa26.62■■□□□ 1.85
TRIM58-201ENST00000366481 CNTLNQ9NXG0 1405 aa26.61■■□□□ 1.85
TRIM58-201ENST00000366481 WDR62O43379 1518 aa26.61■■□□□ 1.85
TRIM58-201ENST00000366481 MIA2Q96PC5 1412 aa26.61■■□□□ 1.85
TRIM58-201ENST00000366481 PKD2Q13563 968 aa26.61■■□□□ 1.85
TRIM58-201ENST00000366481 NPM2Q86SE8 214 aaKnown RBP26.6■■□□□ 1.85
TRIM58-201ENST00000366481 CCDC136Q96JN2 1154 aa26.6■■□□□ 1.85
TRIM58-201ENST00000366481 ADAMTS12P58397 1594 aa26.58■■□□□ 1.85
TRIM58-201ENST00000366481 PBRM1Q86U86 1689 aa26.57■■□□□ 1.84
TRIM58-201ENST00000366481 NUP153P49790 1475 aaKnown RBP26.57■■□□□ 1.84
TRIM58-201ENST00000366481 MRC2Q9UBG0 1479 aa26.55■■□□□ 1.84
TRIM58-201ENST00000366481 SALL2Q9Y467 1007 aaPredicted RBP26.55■■□□□ 1.84
TRIM58-201ENST00000366481 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
TRIM58-201ENST00000366481 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
TRIM58-201ENST00000366481 NCOA1Q15788 1441 aa26.52■■□□□ 1.84
TRIM58-201ENST00000366481 GCC2Q8IWJ2 1684 aa26.51■■□□□ 1.83
TRIM58-201ENST00000366481 RPRD2Q5VT52 1461 aaKnown RBP26.5■■□□□ 1.83
TRIM58-201ENST00000366481 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
TRIM58-201ENST00000366481 IPO9Q96P70 1041 aaKnown RBP26.48■■□□□ 1.83
TRIM58-201ENST00000366481 AKNAQ7Z591 1439 aa26.47■■□□□ 1.83
TRIM58-201ENST00000366481 KIAA0586Q9BVV6 1533 aa26.46■■□□□ 1.83
TRIM58-201ENST00000366481 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
TRIM58-201ENST00000366481 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.45■■□□□ 1.82
TRIM58-201ENST00000366481 TEX14Q8IWB6 1497 aa26.45■■□□□ 1.82
TRIM58-201ENST00000366481 HNRNPMP52272 730 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■■■■□ 22.7
TRIM58-201ENST00000366481 LAS1LQ9Y4W2 734 aaKnown RBP26.43■■□□□ 1.82
TRIM58-201ENST00000366481 ROCK1Q13464 1354 aa26.43■■□□□ 1.82
TRIM58-201ENST00000366481 USP47Q96K76 1375 aa26.41■■□□□ 1.82
TRIM58-201ENST00000366481 KIAA0556O60303 1618 aa26.41■■□□□ 1.82
TRIM58-201ENST00000366481 GRIN2AQ12879 1464 aa26.4■■□□□ 1.82
TRIM58-201ENST00000366481 NUP155O75694 1391 aa26.4■■□□□ 1.82
TRIM58-201ENST00000366481 CARD11Q9BXL7 1154 aa26.4■■□□□ 1.82
TRIM58-201ENST00000366481 PLEKHD1A6NEE1 506 aa26.39■■□□□ 1.82
TRIM58-201ENST00000366481 CAMSAP2Q08AD1 1489 aa26.39■■□□□ 1.82
TRIM58-201ENST00000366481 PZPP20742 1482 aa26.38■■□□□ 1.81
TRIM58-201ENST00000366481 IFT140Q96RY7 1462 aa26.38■■□□□ 1.81
TRIM58-201ENST00000366481 RGL3Q3MIN7 710 aa26.38■■□□□ 1.81
TRIM58-201ENST00000366481 DCAF11Q8TEB1 546 aa26.37■■□□□ 1.81
TRIM58-201ENST00000366481 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
TRIM58-201ENST00000366481 ZBED9Q6R2W3 1325 aa26.37■■□□□ 1.81
TRIM58-201ENST00000366481 SPATA31E1Q6ZUB1 1445 aa26.36■■□□□ 1.81
TRIM58-201ENST00000366481 GPATCH8Q9UKJ3 1502 aaKnown RBP26.35■■□□□ 1.81
TRIM58-201ENST00000366481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.35■■□□□ 1.81
TRIM58-201ENST00000366481 DNMT1P26358 1616 aaKnown RBP26.34■■□□□ 1.81
TRIM58-201ENST00000366481 ST20-MTHFSA0A0A6YYL1 179 aa26.34■■□□□ 1.81
TRIM58-201ENST00000366481 NEFMP07197 916 aa26.34■■□□□ 1.81
TRIM58-201ENST00000366481 RAPGEF6Q8TEU7 1601 aa26.34■■□□□ 1.81
TRIM58-201ENST00000366481 TSPY4P0CV99 314 aa26.32■■□□□ 1.8
TRIM58-201ENST00000366481 TSPY10P0CW01 314 aa26.32■■□□□ 1.8
TRIM58-201ENST00000366481 KIF14Q15058 1648 aa26.32■■□□□ 1.8
TRIM58-201ENST00000366481 TMC1Q8TDI8 760 aa26.31■■□□□ 1.8
TRIM58-201ENST00000366481 ANKRD50Q9ULJ7 1429 aa26.31■■□□□ 1.8
TRIM58-201ENST00000366481 ANKRD30AQ9BXX3 1397 aa26.3■■□□□ 1.8
TRIM58-201ENST00000366481 KIAA1107Q9UPP5 1409 aa26.29■■□□□ 1.8
TRIM58-201ENST00000366481 DHX29Q7Z478 1369 aaKnown RBP26.26■■□□□ 1.79
TRIM58-201ENST00000366481 EIF5BO60841 1220 aaKnown RBP26.26■■□□□ 1.79
TRIM58-201ENST00000366481 EIF4G3O43432 1585 aaKnown RBP26.25■■□□□ 1.79
TRIM58-201ENST00000366481 CEP170Q5SW79 1584 aa26.2■■□□□ 1.78
TRIM58-201ENST00000366481 NUDCQ9Y266 331 aa26.19■■□□□ 1.78
TRIM58-201ENST00000366481 CARMIL2Q6F5E8 1435 aa26.19■■□□□ 1.78
TRIM58-201ENST00000366481 NBPF1Q3BBV0 1214 aa26.17■■□□□ 1.78
TRIM58-201ENST00000366481 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
TRIM58-201ENST00000366481 BCORL1Q5H9F3 1711 aa26.16■■□□□ 1.78
TRIM58-201ENST00000366481 PNISRQ8TF01 805 aaKnown RBP26.16■■□□□ 1.78
TRIM58-201ENST00000366481 KIF15Q9NS87 1388 aa26.15■■□□□ 1.78
TRIM58-201ENST00000366481 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
TRIM58-201ENST00000366481 ATP10BO94823 1461 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms