RNA–Protein interactions for RNA: ENST00000364065.1

RNU6-1090P-201, Transcript of RNA, U6 small nuclear 1090, pseudogene, humanhuman

BASIC

Gene RNU6-1090P, Length 94 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1090P-201ENST00000364065 HOXB3P14651 431 aaPredicted RBP9.97□□□□□ -0.81
RNU6-1090P-201ENST00000364065 TMEM92Q6UXU6 159 aa9.97□□□□□ -0.81
RNU6-1090P-201ENST00000364065 TMC2Q8TDI7 906 aa9.97□□□□□ -0.81
RNU6-1090P-201ENST00000364065 AMER1Q5JTC6 1135 aaPredicted RBP9.96□□□□□ -0.82
RNU6-1090P-201ENST00000364065 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
RNU6-1090P-201ENST00000364065 CDAN1Q8IWY9 1227 aa9.95□□□□□ -0.82
RNU6-1090P-201ENST00000364065 HOXB1P14653 301 aaPredicted RBP9.94□□□□□ -0.82
RNU6-1090P-201ENST00000364065 PLSCR2Q9NRY7 297 aa9.94□□□□□ -0.82
RNU6-1090P-201ENST00000364065 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
RNU6-1090P-201ENST00000364065 PPP1R37O75864 691 aa9.91□□□□□ -0.82
RNU6-1090P-201ENST00000364065 KIF3CO14782 793 aa9.9□□□□□ -0.82
RNU6-1090P-201ENST00000364065 NKX1-1Q15270 411 aaPredicted RBP9.89□□□□□ -0.83
RNU6-1090P-201ENST00000364065 FAM205CA6NFA0 338 aa9.88□□□□□ -0.83
RNU6-1090P-201ENST00000364065 ERBB3P21860 1342 aa9.87□□□□□ -0.83
RNU6-1090P-201ENST00000364065 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
RNU6-1090P-201ENST00000364065 SLC34A2O95436 690 aa9.84□□□□□ -0.83
RNU6-1090P-201ENST00000364065 GPR153Q6NV75 609 aa9.84□□□□□ -0.83
RNU6-1090P-201ENST00000364065 GPHNQ9NQX3 736 aaPredicted RBP9.83□□□□□ -0.84
RNU6-1090P-201ENST00000364065 FOXK1P85037 733 aa9.81□□□□□ -0.84
RNU6-1090P-201ENST00000364065 ARSIQ5FYB1 569 aa9.81□□□□□ -0.84
RNU6-1090P-201ENST00000364065 GTPBP6O43824 516 aaPredicted RBP9.8□□□□□ -0.84
RNU6-1090P-201ENST00000364065 VARS2Q5ST30 1063 aaKnown RBP9.79□□□□□ -0.84
RNU6-1090P-201ENST00000364065 TBC1D12O60347 775 aa9.77□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PDE4AP27815 886 aa9.77□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PLPP6Q8IY26 295 aa9.77□□□□□ -0.85
RNU6-1090P-201ENST00000364065 BBXQ8WY36 941 aaPredicted RBP9.77□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PCDHGA4Q9Y5G9 962 aa9.77□□□□□ -0.85
RNU6-1090P-201ENST00000364065 ZNF316A6NFI3 1004 aaPredicted RBP9.75□□□□□ -0.85
RNU6-1090P-201ENST00000364065 RTN4Q9NQC3 1192 aaKnown RBP9.75□□□□□ -0.85
RNU6-1090P-201ENST00000364065 POTEB3A0JP26 581 aa9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PSDA5PKW4 1024 aaPredicted RBP9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 DSG2Q14126 1118 aa9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 POTEBQ6S5H4 581 aa9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PTCD2Q8WV60 388 aaKnown RBP9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 CRISPLD2Q9H0B8 497 aa9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.74□□□□□ -0.85
RNU6-1090P-201ENST00000364065 NUDT7P0C024 238 aa9.73□□□□□ -0.85
RNU6-1090P-201ENST00000364065 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
RNU6-1090P-201ENST00000364065 PPP1R15BQ5SWA1 713 aa9.71□□□□□ -0.86
RNU6-1090P-201ENST00000364065 KHSRPQ92945 711 aaKnown RBP eCLIP9.71□□□□□ -0.86
RNU6-1090P-201ENST00000364065 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
RNU6-1090P-201ENST00000364065 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
RNU6-1090P-201ENST00000364065 SPNS2Q8IVW8 549 aa9.69□□□□□ -0.86
RNU6-1090P-201ENST00000364065 PBX2P40425 430 aa9.68□□□□□ -0.86
RNU6-1090P-201ENST00000364065 DDX27Q96GQ7 796 aaKnown RBP9.68□□□□□ -0.86
RNU6-1090P-201ENST00000364065 SPRYD3Q8NCJ5 442 aa9.67□□□□□ -0.86
RNU6-1090P-201ENST00000364065 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
RNU6-1090P-201ENST00000364065 NCKAP5LQ9HCH0 1330 aa9.66□□□□□ -0.86
RNU6-1090P-201ENST00000364065 LHX6Q9UPM6 363 aa9.66□□□□□ -0.86
RNU6-1090P-201ENST00000364065 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
RNU6-1090P-201ENST00000364065 PTGER2P43116 358 aa9.63□□□□□ -0.87
RNU6-1090P-201ENST00000364065 MFSD10Q14728 455 aa9.63□□□□□ -0.87
RNU6-1090P-201ENST00000364065 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
RNU6-1090P-201ENST00000364065 UPF1Q92900 1129 aaKnown RBP eCLIP9.62□□□□□ -0.87
RNU6-1090P-201ENST00000364065 PPP4R3BQ5MIZ7 849 aa9.61□□□□□ -0.87
RNU6-1090P-201ENST00000364065 KCNH8Q96L42 1107 aa9.61□□□□□ -0.87
RNU6-1090P-201ENST00000364065 KDM4FA0A1W2PPD8 638 aa9.59□□□□□ -0.87
RNU6-1090P-201ENST00000364065 LSM11P83369 360 aaKnown RBP eCLIP9.58□□□□□ -0.88
RNU6-1090P-201ENST00000364065 MAP3K9P80192 1104 aa9.57□□□□□ -0.88
RNU6-1090P-201ENST00000364065 ANKRD13DQ6ZTN6 518 aa9.57□□□□□ -0.88
RNU6-1090P-201ENST00000364065 ARHGAP33O14559 1287 aa9.56□□□□□ -0.88
RNU6-1090P-201ENST00000364065 PAXIP1Q6ZW49 1069 aaPredicted RBP9.55□□□□□ -0.88
RNU6-1090P-201ENST00000364065 CADPS2Q86UW7 1296 aa9.55□□□□□ -0.88
RNU6-1090P-201ENST00000364065 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
RNU6-1090P-201ENST00000364065 MYT1LQ9UL68 1186 aa9.53□□□□□ -0.88
RNU6-1090P-201ENST00000364065 EVI5O60447 810 aa9.52□□□□□ -0.89
RNU6-1090P-201ENST00000364065 ZNF454Q8N9F8 522 aa9.52□□□□□ -0.89
RNU6-1090P-201ENST00000364065 RNF166Q96A37 237 aaPredicted RBP9.51□□□□□ -0.89
RNU6-1090P-201ENST00000364065 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
RNU6-1090P-201ENST00000364065 JPH4Q96JJ6 628 aa9.5□□□□□ -0.89
RNU6-1090P-201ENST00000364065 WDR70Q9NW82 654 aa9.49□□□□□ -0.89
RNU6-1090P-201ENST00000364065 AXIN2Q9Y2T1 843 aa9.49□□□□□ -0.89
RNU6-1090P-201ENST00000364065 TK2O00142 265 aa9.48□□□□□ -0.89
RNU6-1090P-201ENST00000364065 FOSBP53539 338 aa9.48□□□□□ -0.89
RNU6-1090P-201ENST00000364065 CAMK2BQ13554 666 aa9.48□□□□□ -0.89
RNU6-1090P-201ENST00000364065 EMILIN3Q9NT22 766 aa9.48□□□□□ -0.89
RNU6-1090P-201ENST00000364065 KCNK17Q96T54 332 aa9.47□□□□□ -0.89
RNU6-1090P-201ENST00000364065 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
RNU6-1090P-201ENST00000364065 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
RNU6-1090P-201ENST00000364065 POTEEQ6S8J3 1075 aa9.46□□□□□ -0.9
RNU6-1090P-201ENST00000364065 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
RNU6-1090P-201ENST00000364065 PTPREP23469 700 aa9.45□□□□□ -0.9
RNU6-1090P-201ENST00000364065 ZDHHC16Q969W1 377 aa9.45□□□□□ -0.9
RNU6-1090P-201ENST00000364065 PSEN2P49810 448 aa9.43□□□□□ -0.9
RNU6-1090P-201ENST00000364065 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
RNU6-1090P-201ENST00000364065 DPYSL4O14531 572 aa9.41□□□□□ -0.9
RNU6-1090P-201ENST00000364065 PHF14O94880 888 aa9.41□□□□□ -0.9
RNU6-1090P-201ENST00000364065 E2F4Q16254 413 aa9.41□□□□□ -0.9
RNU6-1090P-201ENST00000364065 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
RNU6-1090P-201ENST00000364065 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
RNU6-1090P-201ENST00000364065 TYW1BQ6NUM6 668 aa9.4□□□□□ -0.9
RNU6-1090P-201ENST00000364065 EPAS1Q99814 870 aa9.4□□□□□ -0.9
RNU6-1090P-201ENST00000364065 SLC4A5Q9BY07 1137 aa9.4□□□□□ -0.9
RNU6-1090P-201ENST00000364065 ADAM33Q9BZ11 813 aa9.37□□□□□ -0.91
RNU6-1090P-201ENST00000364065 PCDHGA10Q9Y5H3 936 aa9.37□□□□□ -0.91
RNU6-1090P-201ENST00000364065 HRO43593 1189 aa9.36□□□□□ -0.91
RNU6-1090P-201ENST00000364065 PDIA6Q15084 440 aa9.36□□□□□ -0.91
RNU6-1090P-201ENST00000364065 VPS9D1Q9Y2B5 631 aa9.36□□□□□ -0.91
RNU6-1090P-201ENST00000364065 PPP1R3GB7ZBB8 358 aa9.35□□□□□ -0.91
RNU6-1090P-201ENST00000364065 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms