RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 NACADO15069 1562 aa26.09■■□□□ 1.77
CDC42BPB-201ENST00000361246 PNNQ9H307 717 aaKnown RBP26.08■■□□□ 1.76
CDC42BPB-201ENST00000361246 G3V3G9 751 aa26.07■■□□□ 1.76
CDC42BPB-201ENST00000361246 DCAF8Q5TAQ9 597 aa26.07■■□□□ 1.76
CDC42BPB-201ENST00000361246 HNRNPMP52272 730 aaKnown RBP eCLIP26.07■■□□□ 1.769e-7■■■■□ 21.4
CDC42BPB-201ENST00000361246 PKD2Q13563 968 aa26.07■■□□□ 1.76
CDC42BPB-201ENST00000361246 MSH5O43196 834 aa26.06■■□□□ 1.76
CDC42BPB-201ENST00000361246 TMX4Q9H1E5 349 aaPredicted RBP26.06■■□□□ 1.76
CDC42BPB-201ENST00000361246 CEP164Q9UPV0 1460 aa26.04■■□□□ 1.76
CDC42BPB-201ENST00000361246 CYB5RLQ6IPT4 315 aa26.04■■□□□ 1.76
CDC42BPB-201ENST00000361246 KIF3BO15066 747 aa26.04■■□□□ 1.76
CDC42BPB-201ENST00000361246 B4GALNT3Q6L9W6 998 aa26.04■■□□□ 1.76
CDC42BPB-201ENST00000361246 TDRD9Q8NDG6 1382 aaKnown RBP26.03■■□□□ 1.76
CDC42BPB-201ENST00000361246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.03■■□□□ 1.76
CDC42BPB-201ENST00000361246 ANO8Q9HCE9 1232 aaPredicted RBP26.02■■□□□ 1.76
CDC42BPB-201ENST00000361246 NGDNQ8NEJ9 315 aaKnown RBP26■■□□□ 1.75
CDC42BPB-201ENST00000361246 EEA1Q15075 1411 aa25.99■■□□□ 1.75
CDC42BPB-201ENST00000361246 EID1Q9Y6B2 187 aa25.97■■□□□ 1.75
CDC42BPB-201ENST00000361246 GNL2Q13823 731 aaKnown RBP25.97■■□□□ 1.75
CDC42BPB-201ENST00000361246 U2AF1L5P0DN76 240 aaPredicted RBP25.97■■□□□ 1.75
CDC42BPB-201ENST00000361246 U2AF1Q01081 240 aaKnown RBP eCLIP25.97■■□□□ 1.75
CDC42BPB-201ENST00000361246 TAF7LQ5H9L4 462 aa25.96■■□□□ 1.75
CDC42BPB-201ENST00000361246 MEX3CQ5U5Q3 659 aaKnown RBP25.95■■□□□ 1.74
CDC42BPB-201ENST00000361246 KLHL34Q8N239 644 aa25.94■■□□□ 1.74
CDC42BPB-201ENST00000361246 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
CDC42BPB-201ENST00000361246 ABCC8Q09428 1581 aa25.93■■□□□ 1.74
CDC42BPB-201ENST00000361246 SOGA1O94964 1423 aa25.93■■□□□ 1.74
CDC42BPB-201ENST00000361246 ROCK2O75116 1388 aaKnown RBP25.92■■□□□ 1.74
CDC42BPB-201ENST00000361246 WASHC2CQ9Y4E1 1318 aa25.91■■□□□ 1.74
CDC42BPB-201ENST00000361246 GORABQ5T7V8 394 aa25.91■■□□□ 1.74
CDC42BPB-201ENST00000361246 PDE4CQ08493 712 aa25.9■■□□□ 1.74
CDC42BPB-201ENST00000361246 GOLGA6L4A6NEF3 574 aa25.89■■□□□ 1.74
CDC42BPB-201ENST00000361246 EVA1CP58658 441 aa25.89■■□□□ 1.74
CDC42BPB-201ENST00000361246 CARMIL2Q6F5E8 1435 aa25.89■■□□□ 1.73
CDC42BPB-201ENST00000361246 CCDC146Q8IYE0 955 aa25.89■■□□□ 1.73
CDC42BPB-201ENST00000361246 SLC4A10Q6U841 1118 aa25.89■■□□□ 1.73
CDC42BPB-201ENST00000361246 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
CDC42BPB-201ENST00000361246 AMPHP49418 695 aa25.87■■□□□ 1.73
CDC42BPB-201ENST00000361246 GTF2E1P29083 439 aaPredicted RBP25.86■■□□□ 1.73
CDC42BPB-201ENST00000361246 ITPRIPQ8IWB1 547 aa25.86■■□□□ 1.73
CDC42BPB-201ENST00000361246 ERICH6BQ5W0A0 696 aa25.86■■□□□ 1.73
CDC42BPB-201ENST00000361246 RTN4Q9NQC3 1192 aaKnown RBP25.85■■□□□ 1.73
CDC42BPB-201ENST00000361246 NGEFQ8N5V2 710 aa25.84■■□□□ 1.73
CDC42BPB-201ENST00000361246 NUP155O75694 1391 aa25.84■■□□□ 1.73
CDC42BPB-201ENST00000361246 TNIKQ9UKE5 1360 aa25.84■■□□□ 1.73
CDC42BPB-201ENST00000361246 EFCAB2Q5VUJ9 269 aa25.84■■□□□ 1.73
CDC42BPB-201ENST00000361246 FRAT2O75474 233 aaPredicted RBP25.83■■□□□ 1.73
CDC42BPB-201ENST00000361246 FHAD1B1AJZ9 1412 aa25.82■■□□□ 1.72
CDC42BPB-201ENST00000361246 KANK4Q5T7N3 995 aaPredicted RBP25.82■■□□□ 1.72
CDC42BPB-201ENST00000361246 TRAK1Q9UPV9 953 aa25.82■■□□□ 1.72
CDC42BPB-201ENST00000361246 ARHGAP35Q9NRY4 1499 aa25.82■■□□□ 1.72
CDC42BPB-201ENST00000361246 SYTL4Q96C24 671 aaPredicted RBP25.8■■□□□ 1.72
CDC42BPB-201ENST00000361246 CHMP4BQ9H444 224 aaKnown RBP25.79■■□□□ 1.72
CDC42BPB-201ENST00000361246 BAZ1AQ9NRL2 1556 aaPredicted RBP25.79■■□□□ 1.72
CDC42BPB-201ENST00000361246 MS4A1P11836 297 aa25.78■■□□□ 1.72
CDC42BPB-201ENST00000361246 PRM3Q9NNZ6 103 aa25.78■■□□□ 1.72
CDC42BPB-201ENST00000361246 DRC7Q8IY82 874 aa25.77■■□□□ 1.72
CDC42BPB-201ENST00000361246 MCCP23508 829 aa25.77■■□□□ 1.72
CDC42BPB-201ENST00000361246 KIAA1211Q6ZU35 1233 aa25.76■■□□□ 1.71
CDC42BPB-201ENST00000361246 NOL8Q76FK4 1167 aaKnown RBP25.76■■□□□ 1.71
CDC42BPB-201ENST00000361246 PDS5BQ9NTI5 1447 aa25.76■■□□□ 1.71
CDC42BPB-201ENST00000361246 VPS53Q5VIR6 699 aa25.75■■□□□ 1.71
CDC42BPB-201ENST00000361246 HSCBQ8IWL3 235 aa25.75■■□□□ 1.71
CDC42BPB-201ENST00000361246 TRIM6-TRIM34B2RNG4 842 aa25.74■■□□□ 1.71
CDC42BPB-201ENST00000361246 SPAG9O60271 1321 aaKnown RBP25.73■■□□□ 1.71
CDC42BPB-201ENST00000361246 HSP90B1P14625 803 aaKnown RBP25.73■■□□□ 1.71
CDC42BPB-201ENST00000361246 GLIPR1L2Q4G1C9 344 aa25.72■■□□□ 1.71
CDC42BPB-201ENST00000361246 TOMM22Q9NS69 142 aa25.72■■□□□ 1.71
CDC42BPB-201ENST00000361246 GOLGA6L6A8MZA4 724 aa25.72■■□□□ 1.71
CDC42BPB-201ENST00000361246 MPHOSPH9Q99550 1183 aa25.72■■□□□ 1.71
CDC42BPB-201ENST00000361246 KTN1Q86UP2 1357 aaKnown RBP25.71■■□□□ 1.71
CDC42BPB-201ENST00000361246 RAD21O60216 631 aa25.7■■□□□ 1.71
CDC42BPB-201ENST00000361246 FBXW7Q969H0 707 aa25.7■■□□□ 1.7
CDC42BPB-201ENST00000361246 CREBRFQ8IUR6 639 aa25.69■■□□□ 1.7
CDC42BPB-201ENST00000361246 STK31Q9BXU1 1019 aa25.69■■□□□ 1.7
CDC42BPB-201ENST00000361246 RRP7AQ9Y3A4 280 aaKnown RBP25.69■■□□□ 1.7
CDC42BPB-201ENST00000361246 CLUAP1Q96AJ1 413 aa25.68■■□□□ 1.7
CDC42BPB-201ENST00000361246 PPP4R2Q9NY27 417 aa25.67■■□□□ 1.7
CDC42BPB-201ENST00000361246 SMARCA2P51531 1590 aa25.66■■□□□ 1.7
CDC42BPB-201ENST00000361246 NECTIN2Q92692 538 aa25.66■■□□□ 1.7
CDC42BPB-201ENST00000361246 NAP1L5Q96NT1 182 aaPredicted RBP25.65■■□□□ 1.7
CDC42BPB-201ENST00000361246 FOXD4L1Q9NU39 408 aa25.64■■□□□ 1.69
CDC42BPB-201ENST00000361246 ELL2O00472 640 aaPredicted RBP25.64■■□□□ 1.69
CDC42BPB-201ENST00000361246 CCDC88BA6NC98 1476 aa25.64■■□□□ 1.69
CDC42BPB-201ENST00000361246 SETD5Q9C0A6 1442 aa25.63■■□□□ 1.69
CDC42BPB-201ENST00000361246 SMC4Q9NTJ3 1288 aa25.63■■□□□ 1.69
CDC42BPB-201ENST00000361246 ANP32EQ9BTT0 268 aa25.62■■□□□ 1.69
CDC42BPB-201ENST00000361246 TERF2IPQ9NYB0 399 aa25.6■■□□□ 1.69
CDC42BPB-201ENST00000361246 IPO8O15397 1037 aaKnown RBP25.6■■□□□ 1.69
CDC42BPB-201ENST00000361246 JPH4Q96JJ6 628 aa25.58■■□□□ 1.69
CDC42BPB-201ENST00000361246 ANKRD30AQ9BXX3 1397 aa25.58■■□□□ 1.69
CDC42BPB-201ENST00000361246 FHOD3Q2V2M9 1422 aa25.58■■□□□ 1.69
CDC42BPB-201ENST00000361246 MINK1Q8N4C8 1332 aaPredicted RBP25.57■■□□□ 1.68
CDC42BPB-201ENST00000361246 WWC1Q8IX03 1113 aa25.57■■□□□ 1.68
CDC42BPB-201ENST00000361246 RASSF8Q8NHQ8 419 aa25.56■■□□□ 1.68
CDC42BPB-201ENST00000361246 FOXD4L5Q5VV16 416 aaPredicted RBP25.55■■□□□ 1.68
CDC42BPB-201ENST00000361246 FOXD4L4Q8WXT5 416 aaPredicted RBP25.55■■□□□ 1.68
CDC42BPB-201ENST00000361246 NUTM2GQ5VZR2 741 aa25.55■■□□□ 1.68
CDC42BPB-201ENST00000361246 SAMD1Q6SPF0 538 aaPredicted RBP25.55■■□□□ 1.68
CDC42BPB-201ENST00000361246 C1orf141Q5JVX7 400 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms