RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 ARAP3Q8WWN8 1544 aa17.14■□□□□ 0.33
RBM39-203ENST00000361162 ANP32CO43423 234 aa17.14■□□□□ 0.33
RBM39-203ENST00000361162 CDK11AQ9UQ88 783 aaPredicted RBP17.13■□□□□ 0.33
RBM39-203ENST00000361162 ATP10BO94823 1461 aa17.13■□□□□ 0.33
RBM39-203ENST00000361162 MIA2Q96PC5 1412 aa17.13■□□□□ 0.33
RBM39-203ENST00000361162 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
RBM39-203ENST00000361162 NCOA2Q15596 1464 aa17.11■□□□□ 0.33
RBM39-203ENST00000361162 DEKP35659 375 aaKnown RBP17.09■□□□□ 0.33
RBM39-203ENST00000361162 CCNB3Q8WWL7 1395 aa17.09■□□□□ 0.33
RBM39-203ENST00000361162 FANCIQ9NVI1 1328 aa17.09■□□□□ 0.33
RBM39-203ENST00000361162 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.33
RBM39-203ENST00000361162 PREX2Q70Z35 1606 aa17.08■□□□□ 0.32
RBM39-203ENST00000361162 ABCC10Q5T3U5 1492 aa17.08■□□□□ 0.32
RBM39-203ENST00000361162 RIMBP3CA6NJZ7 1639 aa17.08■□□□□ 0.32
RBM39-203ENST00000361162 RIMBP3BA6NNM3 1639 aa17.08■□□□□ 0.32
RBM39-203ENST00000361162 RIMBP3Q9UFD9 1639 aa17.08■□□□□ 0.32
RBM39-203ENST00000361162 MTUS2Q5JR59 1369 aa17.07■□□□□ 0.32
RBM39-203ENST00000361162 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
RBM39-203ENST00000361162 CDC42BPAQ5VT25 1732 aa17.06■□□□□ 0.32
RBM39-203ENST00000361162 P3H3Q8IVL6 736 aa17.06■□□□□ 0.32
RBM39-203ENST00000361162 MAPKBP1O60336 1514 aa17.05■□□□□ 0.32
RBM39-203ENST00000361162 PTPN23Q9H3S7 1636 aa17.05■□□□□ 0.32
RBM39-203ENST00000361162 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
RBM39-203ENST00000361162 NBR1Q14596 966 aa17.03■□□□□ 0.32
RBM39-203ENST00000361162 FGD6Q6ZV73 1430 aa17.03■□□□□ 0.32
RBM39-203ENST00000361162 MYO5CQ9NQX4 1742 aa17.03■□□□□ 0.32
RBM39-203ENST00000361162 CROCC2H7BZ55 1655 aa17.03■□□□□ 0.32
RBM39-203ENST00000361162 ABCA9Q8IUA7 1624 aa17.03■□□□□ 0.32
RBM39-203ENST00000361162 AKNAQ7Z591 1439 aa17.01■□□□□ 0.31
RBM39-203ENST00000361162 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
RBM39-203ENST00000361162 PHLDB1Q86UU1 1377 aa17■□□□□ 0.31
RBM39-203ENST00000361162 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
RBM39-203ENST00000361162 CFAP74Q9C0B2 1584 aa16.99■□□□□ 0.31
RBM39-203ENST00000361162 DNMT1P26358 1616 aaKnown RBP16.99■□□□□ 0.31
RBM39-203ENST00000361162 GLI2P10070 1586 aa16.98■□□□□ 0.31
RBM39-203ENST00000361162 WDR7Q9Y4E6 1490 aa16.97■□□□□ 0.31
RBM39-203ENST00000361162 ADGBQ8N7X0 1667 aa16.97■□□□□ 0.31
RBM39-203ENST00000361162 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
RBM39-203ENST00000361162 GCC2Q8IWJ2 1684 aa16.96■□□□□ 0.31
RBM39-203ENST00000361162 B4GALNT3Q6L9W6 998 aa16.96■□□□□ 0.31
RBM39-203ENST00000361162 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.3
RBM39-203ENST00000361162 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.95■□□□□ 0.3
RBM39-203ENST00000361162 CDC42BPBQ9Y5S2 1711 aa16.95■□□□□ 0.3
RBM39-203ENST00000361162 MAST1Q9Y2H9 1570 aa16.94■□□□□ 0.3
RBM39-203ENST00000361162 GPATCH8Q9UKJ3 1502 aaKnown RBP16.94■□□□□ 0.3
RBM39-203ENST00000361162 PLEKHH2Q8IVE3 1493 aa16.94■□□□□ 0.3
RBM39-203ENST00000361162 TTC37Q6PGP7 1564 aa16.93■□□□□ 0.3
RBM39-203ENST00000361162 PAK3O75914 559 aaPredicted RBP16.92■□□□□ 0.3
RBM39-203ENST00000361162 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
RBM39-203ENST00000361162 ATP1B4Q9UN42 357 aaPredicted RBP16.91■□□□□ 0.3
RBM39-203ENST00000361162 ADGRL2O95490 1459 aa16.88■□□□□ 0.29
RBM39-203ENST00000361162 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
RBM39-203ENST00000361162 PPP4R2Q9NY27 417 aa16.88■□□□□ 0.29
RBM39-203ENST00000361162 MAP3K4Q9Y6R4 1608 aa16.87■□□□□ 0.29
RBM39-203ENST00000361162 CAMSAP2Q08AD1 1489 aa16.87■□□□□ 0.29
RBM39-203ENST00000361162 KIAA1107Q9UPP5 1409 aa16.87■□□□□ 0.29
RBM39-203ENST00000361162 CCDC184Q52MB2 194 aa16.86■□□□□ 0.29
RBM39-203ENST00000361162 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
RBM39-203ENST00000361162 SAMD9LQ8IVG5 1584 aa16.86■□□□□ 0.29
RBM39-203ENST00000361162 NOP58Q9Y2X3 529 aaKnown RBP16.84■□□□□ 0.29
RBM39-203ENST00000361162 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
RBM39-203ENST00000361162 PLCH2O75038 1416 aa16.84■□□□□ 0.29
RBM39-203ENST00000361162 ABCC1P33527 1531 aa16.84■□□□□ 0.29
RBM39-203ENST00000361162 ASXL2Q76L83 1435 aa16.83■□□□□ 0.28
RBM39-203ENST00000361162 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
RBM39-203ENST00000361162 MYT1LQ9UL68 1186 aa16.82■□□□□ 0.28
RBM39-203ENST00000361162 SALL2Q9Y467 1007 aaPredicted RBP16.82■□□□□ 0.28
RBM39-203ENST00000361162 HFM1A2PYH4 1435 aa16.81■□□□□ 0.28
RBM39-203ENST00000361162 RTN4Q9NQC3 1192 aaKnown RBP16.8■□□□□ 0.28
RBM39-203ENST00000361162 DAPK1P53355 1430 aa16.79■□□□□ 0.28
RBM39-203ENST00000361162 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
RBM39-203ENST00000361162 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
RBM39-203ENST00000361162 DIP2BQ9P265 1576 aa16.78■□□□□ 0.28
RBM39-203ENST00000361162 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
RBM39-203ENST00000361162 TIMELESSQ9UNS1 1208 aa16.78■□□□□ 0.28
RBM39-203ENST00000361162 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
RBM39-203ENST00000361162 RSPH4AQ5TD94 716 aa16.76■□□□□ 0.27
RBM39-203ENST00000361162 NEO1Q92859 1461 aa16.76■□□□□ 0.27
RBM39-203ENST00000361162 MBD5Q9P267 1494 aa16.76■□□□□ 0.27
RBM39-203ENST00000361162 ARHGAP5Q13017 1502 aa16.76■□□□□ 0.27
RBM39-203ENST00000361162 CCDC141Q6ZP82 1450 aa16.76■□□□□ 0.27
RBM39-203ENST00000361162 IL27Q8NEV9 243 aa16.75■□□□□ 0.27
RBM39-203ENST00000361162 ABCC5O15440 1437 aa16.73■□□□□ 0.27
RBM39-203ENST00000361162 INO80Q9ULG1 1556 aaPredicted RBP16.73■□□□□ 0.27
RBM39-203ENST00000361162 BCORL1Q5H9F3 1711 aa16.73■□□□□ 0.27
RBM39-203ENST00000361162 KDM5CP41229 1560 aa16.71■□□□□ 0.27
RBM39-203ENST00000361162 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
RBM39-203ENST00000361162 WASHC2AQ641Q2 1341 aa16.71■□□□□ 0.27
RBM39-203ENST00000361162 KDM5DQ9BY66 1539 aa16.7■□□□□ 0.26
RBM39-203ENST00000361162 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
RBM39-203ENST00000361162 NPM1P06748 294 aaKnown RBP eCLIP16.69■□□□□ 0.26
RBM39-203ENST00000361162 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
RBM39-203ENST00000361162 HSPA5P11021 654 aaKnown RBP16.69■□□□□ 0.26
RBM39-203ENST00000361162 RTL5Q5HYW3 569 aaPredicted RBP16.69■□□□□ 0.26
RBM39-203ENST00000361162 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
RBM39-203ENST00000361162 PPRC1Q5VV67 1664 aaKnown RBP16.69■□□□□ 0.26
RBM39-203ENST00000361162 KIF13AQ9H1H9 1805 aa16.69■□□□□ 0.26
RBM39-203ENST00000361162 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
RBM39-203ENST00000361162 MRS2Q9HD23 443 aa16.68■□□□□ 0.26
RBM39-203ENST00000361162 NAIPQ13075 1403 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms