RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
RAB5B-201ENST00000360299 MAGI1Q96QZ7 1491 aaPredicted RBP9.45□□□□□ -0.9
RAB5B-201ENST00000360299 POGZQ7Z3K3 1410 aa9.45□□□□□ -0.9
RAB5B-201ENST00000360299 CANXP27824 592 aaKnown RBP9.45□□□□□ -0.9
RAB5B-201ENST00000360299 ARXQ96QS3 562 aa9.45□□□□□ -0.9
RAB5B-201ENST00000360299 NUTM2FA1L443 756 aa9.44□□□□□ -0.9
RAB5B-201ENST00000360299 AFAP1Q8N556 730 aa9.44□□□□□ -0.9
RAB5B-201ENST00000360299 SETD5Q9C0A6 1442 aa9.43□□□□□ -0.9
RAB5B-201ENST00000360299 PPM1GO15355 546 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-201ENST00000360299 RSPH4AQ5TD94 716 aa9.43□□□□□ -0.9
RAB5B-201ENST00000360299 HNRNPUQ00839 825 aaKnown RBP eCLIP9.42□□□□□ -0.9
RAB5B-201ENST00000360299 BCL11AQ9H165 835 aa9.41□□□□□ -0.9
RAB5B-201ENST00000360299 ANKRD30AQ9BXX3 1397 aa9.41□□□□□ -0.9
RAB5B-201ENST00000360299 GRIN2AQ12879 1464 aa9.41□□□□□ -0.9
RAB5B-201ENST00000360299 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
RAB5B-201ENST00000360299 CD109Q6YHK3 1445 aa9.4□□□□□ -0.9
RAB5B-201ENST00000360299 UACAQ9BZF9 1416 aa9.4□□□□□ -0.9
RAB5B-201ENST00000360299 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
RAB5B-201ENST00000360299 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
RAB5B-201ENST00000360299 NPHP1O15259 732 aa9.4□□□□□ -0.91
RAB5B-201ENST00000360299 ATF3P18847 181 aa9.39□□□□□ -0.91
RAB5B-201ENST00000360299 FAM9BQ8IZU0 186 aa9.39□□□□□ -0.91
RAB5B-201ENST00000360299 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
RAB5B-201ENST00000360299 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
RAB5B-201ENST00000360299 NUP155O75694 1391 aa9.38□□□□□ -0.91
RAB5B-201ENST00000360299 ARHGAP5Q13017 1502 aa9.38□□□□□ -0.91
RAB5B-201ENST00000360299 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-201ENST00000360299 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.38□□□□□ -0.91
RAB5B-201ENST00000360299 CARD11Q9BXL7 1154 aa9.37□□□□□ -0.91
RAB5B-201ENST00000360299 PKD2Q13563 968 aa9.37□□□□□ -0.91
RAB5B-201ENST00000360299 KIAA0586Q9BVV6 1533 aa9.36□□□□□ -0.91
RAB5B-201ENST00000360299 PROSER2Q86WR7 435 aaPredicted RBP9.36□□□□□ -0.91
RAB5B-201ENST00000360299 DCAF11Q8TEB1 546 aa9.36□□□□□ -0.91
RAB5B-201ENST00000360299 MIER1Q8N108 512 aa9.36□□□□□ -0.91
RAB5B-201ENST00000360299 ABCA10Q8WWZ4 1543 aa9.35□□□□□ -0.91
RAB5B-201ENST00000360299 NUTM2BA6NNL0 878 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-201ENST00000360299 NUTM2EB1AL46 878 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-201ENST00000360299 NUTM2AQ8IVF1 878 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-201ENST00000360299 CEBPAP49715 358 aaPredicted RBP9.35□□□□□ -0.91
RAB5B-201ENST00000360299 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
RAB5B-201ENST00000360299 DMRT2Q9Y5R5 561 aa9.35□□□□□ -0.91
RAB5B-201ENST00000360299 TXNDC2Q86VQ3 553 aa9.34□□□□□ -0.91
RAB5B-201ENST00000360299 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
RAB5B-201ENST00000360299 SIN3AQ96ST3 1273 aa9.34□□□□□ -0.91
RAB5B-201ENST00000360299 SCAPERQ9BY12 1400 aa9.34□□□□□ -0.91
RAB5B-201ENST00000360299 RRBP1Q9P2E9 1410 aaKnown RBP9.33□□□□□ -0.92
RAB5B-201ENST00000360299 FOXD1Q16676 465 aa9.33□□□□□ -0.92
RAB5B-201ENST00000360299 ANKLE2Q86XL3 938 aa9.33□□□□□ -0.92
RAB5B-201ENST00000360299 FKBP8Q14318 412 aa9.32□□□□□ -0.92
RAB5B-201ENST00000360299 KNSTRNQ9Y448 316 aa9.32□□□□□ -0.92
RAB5B-201ENST00000360299 RAB3GAP2Q9H2M9 1393 aa9.31□□□□□ -0.92
RAB5B-201ENST00000360299 HSPA2P54652 639 aa9.31□□□□□ -0.92
RAB5B-201ENST00000360299 EVA1CP58658 441 aa9.31□□□□□ -0.92
RAB5B-201ENST00000360299 ZNF644Q9H582 1327 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-201ENST00000360299 HIRIP3Q9BW71 556 aaPredicted RBP9.31□□□□□ -0.92
RAB5B-201ENST00000360299 DHX57Q6P158 1386 aaKnown RBP9.31□□□□□ -0.92
RAB5B-201ENST00000360299 CFAP53Q96M91 514 aa9.31□□□□□ -0.92
RAB5B-201ENST00000360299 WDR62O43379 1518 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 UBAP1LF5GYI3 381 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 TIAM1Q13009 1591 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 DCAF8L1A6NGE4 600 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 WDR97A6NE52 1622 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 PLB1Q6P1J6 1458 aa9.3□□□□□ -0.92
RAB5B-201ENST00000360299 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.29□□□□□ -0.92
RAB5B-201ENST00000360299 MPHOSPH9Q99550 1183 aa9.29□□□□□ -0.92
RAB5B-201ENST00000360299 PCF11O94913 1555 aaKnown RBP9.29□□□□□ -0.92
RAB5B-201ENST00000360299 TNNT2P45379 298 aaPredicted RBP9.29□□□□□ -0.92
RAB5B-201ENST00000360299 ANP32AP39687 249 aaKnown RBP9.28□□□□□ -0.92
RAB5B-201ENST00000360299 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
RAB5B-201ENST00000360299 TEX14Q8IWB6 1497 aa9.28□□□□□ -0.92
RAB5B-201ENST00000360299 TMF1P82094 1093 aa9.28□□□□□ -0.92
RAB5B-201ENST00000360299 KLHL34Q8N239 644 aa9.28□□□□□ -0.92
RAB5B-201ENST00000360299 ASXL2Q76L83 1435 aa9.27□□□□□ -0.92
RAB5B-201ENST00000360299 IQGAP2Q13576 1575 aa9.27□□□□□ -0.93
RAB5B-201ENST00000360299 MSH5O43196 834 aa9.27□□□□□ -0.93
RAB5B-201ENST00000360299 LRRC9Q6ZRR7 1453 aa9.27□□□□□ -0.93
RAB5B-201ENST00000360299 EIF4G3O43432 1585 aaKnown RBP9.26□□□□□ -0.93
RAB5B-201ENST00000360299 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
RAB5B-201ENST00000360299 PSME1Q06323 249 aa9.26□□□□□ -0.93
RAB5B-201ENST00000360299 AKNAQ7Z591 1439 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 VGFO15240 615 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-201ENST00000360299 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 CFAP43Q8NDM7 1665 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 ABCA5Q8WWZ7 1642 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 CUL7Q14999 1698 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 CTTNBP2Q8WZ74 1663 aa9.25□□□□□ -0.93
RAB5B-201ENST00000360299 CCER2I3L3R5 266 aa9.24□□□□□ -0.93
RAB5B-201ENST00000360299 SLC26A8Q96RN1 970 aa9.24□□□□□ -0.93
RAB5B-201ENST00000360299 PPP6R1Q9UPN7 881 aa9.24□□□□□ -0.93
RAB5B-201ENST00000360299 SALL2Q9Y467 1007 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-201ENST00000360299 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
RAB5B-201ENST00000360299 UPF2Q9HAU5 1272 aaKnown RBP9.24□□□□□ -0.93
RAB5B-201ENST00000360299 TRAK1Q9UPV9 953 aa9.24□□□□□ -0.93
RAB5B-201ENST00000360299 NUDCQ9Y266 331 aa9.24□□□□□ -0.93
RAB5B-201ENST00000360299 DENND4BO75064 1496 aaPredicted RBP9.23□□□□□ -0.93
RAB5B-201ENST00000360299 ADGRL1O94910 1474 aa9.22□□□□□ -0.93
RAB5B-201ENST00000360299 LTV1Q96GA3 475 aaPredicted RBP9.22□□□□□ -0.93
RAB5B-201ENST00000360299 LRRIQ1Q96JM4 1722 aa9.22□□□□□ -0.93
RAB5B-201ENST00000360299 KIF15Q9NS87 1388 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms