RNA–Protein interactions for RNA: ENST00000359353.9

DDX42-201, Transcript of DEAD-box helicase 42, humanhuman

TSL 5 BASIC

Gene DDX42, Length 2,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-201ENST00000359353 TCOF1Q13428 1488 aaKnown RBP33.17■■■□□ 2.9
DDX42-201ENST00000359353 BCL11AQ9H165 835 aa33.15■■■□□ 2.9
DDX42-201ENST00000359353 POLR3GLQ9BT43 218 aa33.15■■■□□ 2.9
DDX42-201ENST00000359353 NCOA1Q15788 1441 aa33.1■■■□□ 2.89
DDX42-201ENST00000359353 SLC4A1APQ9BWU0 796 aaKnown RBP33.08■■■□□ 2.89
DDX42-201ENST00000359353 KIF7Q2M1P5 1343 aa33.08■■■□□ 2.89
DDX42-201ENST00000359353 PPP4R2Q9NY27 417 aa33.07■■■□□ 2.88
DDX42-201ENST00000359353 ZNF326Q5BKZ1 582 aaKnown RBP33.07■■■□□ 2.88
DDX42-201ENST00000359353 KIF21AQ7Z4S6 1674 aa33.06■■■□□ 2.88
DDX42-201ENST00000359353 PDS5BQ9NTI5 1447 aa33.04■■■□□ 2.88
DDX42-201ENST00000359353 ANKRD30BQ9BXX2 1392 aa33.03■■■□□ 2.88
DDX42-201ENST00000359353 ERICH6Q7L0X2 663 aa33.02■■■□□ 2.88
DDX42-201ENST00000359353 IQGAP2Q13576 1575 aa33.01■■■□□ 2.87
DDX42-201ENST00000359353 FANCIQ9NVI1 1328 aa33■■■□□ 2.87
DDX42-201ENST00000359353 AKNAQ7Z591 1439 aa32.99■■■□□ 2.87
DDX42-201ENST00000359353 TARBP1Q13395 1621 aaKnown RBP32.98■■■□□ 2.87
DDX42-201ENST00000359353 DAPK1P53355 1430 aa32.98■■■□□ 2.87
DDX42-201ENST00000359353 MIA2Q96PC5 1412 aa32.98■■■□□ 2.87
DDX42-201ENST00000359353 ZBED9Q6R2W3 1325 aa32.96■■■□□ 2.87
DDX42-201ENST00000359353 RPRD2Q5VT52 1461 aaKnown RBP32.96■■■□□ 2.87
DDX42-201ENST00000359353 TEX14Q8IWB6 1497 aa32.96■■■□□ 2.87
DDX42-201ENST00000359353 WDR62O43379 1518 aa32.95■■■□□ 2.87
DDX42-201ENST00000359353 ABCC5O15440 1437 aa32.94■■■□□ 2.86
DDX42-201ENST00000359353 PBRM1Q86U86 1689 aa32.92■■■□□ 2.86
DDX42-201ENST00000359353 ZNF777Q9ULD5 760 aaPredicted RBP32.89■■■□□ 2.86
DDX42-201ENST00000359353 SPATA31E1Q6ZUB1 1445 aa32.87■■■□□ 2.85
DDX42-201ENST00000359353 ERICH6BQ5W0A0 696 aa32.84■■■□□ 2.85
DDX42-201ENST00000359353 ADAMTS12P58397 1594 aa32.82■■■□□ 2.84
DDX42-201ENST00000359353 DNMT1P26358 1616 aaKnown RBP32.79■■■□□ 2.84
DDX42-201ENST00000359353 ROCK1Q13464 1354 aa32.79■■■□□ 2.84
DDX42-201ENST00000359353 NUP153P49790 1475 aaKnown RBP32.75■■■□□ 2.83
DDX42-201ENST00000359353 PRG4Q92954 1404 aaPredicted RBP32.74■■■□□ 2.83
DDX42-201ENST00000359353 CFDP1Q9UEE9 299 aaPredicted RBP32.74■■■□□ 2.83
DDX42-201ENST00000359353 USP47Q96K76 1375 aa32.74■■■□□ 2.83
DDX42-201ENST00000359353 ZNF608Q9ULD9 1512 aaPredicted RBP32.74■■■□□ 2.83
DDX42-201ENST00000359353 PZPP20742 1482 aa32.73■■■□□ 2.83
DDX42-201ENST00000359353 DHX29Q7Z478 1369 aaKnown RBP32.73■■■□□ 2.83
DDX42-201ENST00000359353 PKD2Q13563 968 aa32.73■■■□□ 2.83
DDX42-201ENST00000359353 BCORL1Q5H9F3 1711 aa32.72■■■□□ 2.83
DDX42-201ENST00000359353 DISP1Q96F81 1524 aa32.68■■■□□ 2.82
DDX42-201ENST00000359353 POLR1AO95602 1720 aaPredicted RBP32.68■■■□□ 2.82
DDX42-201ENST00000359353 KDM2AQ9Y2K7 1162 aa32.64■■■□□ 2.82
DDX42-201ENST00000359353 NUDCQ9Y266 331 aa32.64■■■□□ 2.82
DDX42-201ENST00000359353 KIAA0556O60303 1618 aa32.64■■■□□ 2.82
DDX42-201ENST00000359353 CAMSAP2Q08AD1 1489 aa32.63■■■□□ 2.81
DDX42-201ENST00000359353 CCDC136Q96JN2 1154 aa32.63■■■□□ 2.81
DDX42-201ENST00000359353 MRC2Q9UBG0 1479 aa32.62■■■□□ 2.81
DDX42-201ENST00000359353 PAK3O75914 559 aaPredicted RBP32.61■■■□□ 2.81
DDX42-201ENST00000359353 SMG6Q86US8 1419 aaKnown RBP32.6■■■□□ 2.81
DDX42-201ENST00000359353 RAPGEF6Q8TEU7 1601 aa32.6■■■□□ 2.81
DDX42-201ENST00000359353 NBR1Q14596 966 aa32.59■■■□□ 2.81
DDX42-201ENST00000359353 SALL2Q9Y467 1007 aaPredicted RBP32.59■■■□□ 2.81
DDX42-201ENST00000359353 TMC1Q8TDI8 760 aa32.58■■■□□ 2.81
DDX42-201ENST00000359353 KIAA1107Q9UPP5 1409 aa32.57■■■□□ 2.8
DDX42-201ENST00000359353 PLB1Q6P1J6 1458 aa32.56■■■□□ 2.8
DDX42-201ENST00000359353 CARD11Q9BXL7 1154 aa32.55■■■□□ 2.8
DDX42-201ENST00000359353 MBD5Q9P267 1494 aa32.55■■■□□ 2.8
DDX42-201ENST00000359353 FBLN2P98095 1184 aa32.55■■■□□ 2.8
DDX42-201ENST00000359353 KIF14Q15058 1648 aa32.54■■■□□ 2.8
DDX42-201ENST00000359353 PNISRQ8TF01 805 aaKnown RBP32.53■■■□□ 2.8
DDX42-201ENST00000359353 KIAA0586Q9BVV6 1533 aa32.53■■■□□ 2.8
DDX42-201ENST00000359353 TROQ12816 1431 aaPredicted RBP32.51■■■□□ 2.79
DDX42-201ENST00000359353 GPATCH8Q9UKJ3 1502 aaKnown RBP32.51■■■□□ 2.79
DDX42-201ENST00000359353 NOP58Q9Y2X3 529 aaKnown RBP32.5■■■□□ 2.79
DDX42-201ENST00000359353 ST20-MTHFSA0A0A6YYL1 179 aa32.5■■■□□ 2.79
DDX42-201ENST00000359353 KDM5CP41229 1560 aa32.48■■■□□ 2.79
DDX42-201ENST00000359353 NUP155O75694 1391 aa32.48■■■□□ 2.79
DDX42-201ENST00000359353 ERCC6Q03468 1493 aa32.46■■■□□ 2.79
DDX42-201ENST00000359353 ANKRD50Q9ULJ7 1429 aa32.45■■■□□ 2.79
DDX42-201ENST00000359353 DCAF11Q8TEB1 546 aa32.44■■■□□ 2.78
DDX42-201ENST00000359353 ANKRD30AQ9BXX3 1397 aa32.43■■■□□ 2.78
DDX42-201ENST00000359353 DEKP35659 375 aaKnown RBP32.43■■■□□ 2.78
DDX42-201ENST00000359353 RNF123Q5XPI4 1314 aa32.42■■■□□ 2.78
DDX42-201ENST00000359353 ADGBQ8N7X0 1667 aa32.42■■■□□ 2.78
DDX42-201ENST00000359353 GRIN2AQ12879 1464 aa32.41■■■□□ 2.78
DDX42-201ENST00000359353 CHMP7Q8WUX9 453 aaPredicted RBP32.38■■■□□ 2.77
DDX42-201ENST00000359353 ITSN2Q9NZM3 1697 aa32.35■■■□□ 2.77
DDX42-201ENST00000359353 IFT140Q96RY7 1462 aa32.33■■■□□ 2.77
DDX42-201ENST00000359353 HNRNPMP52272 730 aaKnown RBP eCLIP32.33■■■□□ 2.776e-6■■■■□ 20.3
DDX42-201ENST00000359353 KIF15Q9NS87 1388 aa32.32■■■□□ 2.77
DDX42-201ENST00000359353 EXOC6Q8TAG9 804 aa32.32■■■□□ 2.76
DDX42-201ENST00000359353 ADGRL2O95490 1459 aa32.32■■■□□ 2.76
DDX42-201ENST00000359353 CROCC2H7BZ55 1655 aa32.32■■■□□ 2.76
DDX42-201ENST00000359353 NPM2Q86SE8 214 aaKnown RBP32.31■■■□□ 2.76
DDX42-201ENST00000359353 ANP32AP39687 249 aaKnown RBP32.31■■■□□ 2.76
DDX42-201ENST00000359353 RALGAPBQ86X10 1494 aa32.31■■■□□ 2.76
DDX42-201ENST00000359353 RGL3Q3MIN7 710 aa32.29■■■□□ 2.76
DDX42-201ENST00000359353 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
DDX42-201ENST00000359353 C9orf84Q5VXU9 1444 aa32.28■■■□□ 2.76
DDX42-201ENST00000359353 MYBBP1AQ9BQG0 1328 aaKnown RBP32.27■■■□□ 2.76
DDX42-201ENST00000359353 ARID4BQ4LE39 1312 aaPredicted RBP32.27■■■□□ 2.76
DDX42-201ENST00000359353 ROCK2O75116 1388 aaKnown RBP32.26■■■□□ 2.76
DDX42-201ENST00000359353 PLEKHD1A6NEE1 506 aa32.26■■■□□ 2.75
DDX42-201ENST00000359353 TSPY4P0CV99 314 aa32.25■■■□□ 2.75
DDX42-201ENST00000359353 TSPY10P0CW01 314 aa32.25■■■□□ 2.75
DDX42-201ENST00000359353 UHRF1BP1Q6BDS2 1440 aa32.25■■■□□ 2.75
DDX42-201ENST00000359353 IPO9Q96P70 1041 aaKnown RBP32.25■■■□□ 2.75
DDX42-201ENST00000359353 RRP1P56182 461 aaKnown RBP32.24■■■□□ 2.75
DDX42-201ENST00000359353 JPH4Q96JJ6 628 aa32.24■■■□□ 2.75
DDX42-201ENST00000359353 LRPPRCP42704 1394 aaKnown RBP32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms