RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 GNEQ9Y223 722 aaKnown RBP3.48□□□□□ -1.85
SMARCAD1-202ENST00000359052 ABCC9O60706 1549 aa3.48□□□□□ -1.85
SMARCAD1-202ENST00000359052 STAG3Q9UJ98 1225 aa3.48□□□□□ -1.85
SMARCAD1-202ENST00000359052 MS4A1P11836 297 aa3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 CCDC82Q8N4S0 544 aa3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 MTMR7Q9Y216 660 aa3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 THOC2Q8NI27 1593 aaKnown RBP3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 NPDC1Q9NQX5 325 aaPredicted RBP3.47□□□□□ -1.85
SMARCAD1-202ENST00000359052 POM121Q96HA1 1249 aa3.46□□□□□ -1.86
SMARCAD1-202ENST00000359052 PDE4DQ08499 809 aa3.46□□□□□ -1.86
SMARCAD1-202ENST00000359052 CFAP70Q5T0N1 1121 aa3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 MLLT3P42568 568 aaPredicted RBP3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 TUSC1Q2TAM9 212 aa3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 SPINK5Q9NQ38 1064 aaPredicted RBP3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 IGHA2P01877 340 aa3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 TTC13Q8NBP0 860 aa3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 PARP9Q8IXQ6 854 aa3.45□□□□□ -1.86
SMARCAD1-202ENST00000359052 SMARCA2P51531 1590 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 EMILIN3Q9NT22 766 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 FAM69CQ0P6D2 419 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 ZFP91Q96JP5 570 aaPredicted RBP3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 TMEM121BQ9BXQ6 578 aaPredicted RBP3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 HMGXB3Q12766 1538 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 RASEFQ8IZ41 740 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 GJD4Q96KN9 370 aaPredicted RBP3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 PPP2R2DQ66LE6 453 aa3.44□□□□□ -1.86
SMARCAD1-202ENST00000359052 RB1CC1Q8TDY2 1594 aa3.43□□□□□ -1.86
SMARCAD1-202ENST00000359052 CHGAP10645 457 aaKnown RBP3.43□□□□□ -1.86
SMARCAD1-202ENST00000359052 OSBPP22059 807 aa3.43□□□□□ -1.86
SMARCAD1-202ENST00000359052 P3H3Q8IVL6 736 aa3.43□□□□□ -1.86
SMARCAD1-202ENST00000359052 PDIA6Q15084 440 aa3.42□□□□□ -1.86
SMARCAD1-202ENST00000359052 AK7Q96M32 723 aa3.42□□□□□ -1.86
SMARCAD1-202ENST00000359052 C8orf37Q96NL8 207 aa3.42□□□□□ -1.86
SMARCAD1-202ENST00000359052 ARID3CA6NKF2 412 aa3.42□□□□□ -1.86
SMARCAD1-202ENST00000359052 CLUAP1Q96AJ1 413 aa3.42□□□□□ -1.86
SMARCAD1-202ENST00000359052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.41□□□□□ -1.86
SMARCAD1-202ENST00000359052 HNRNPUL2Q1KMD3 747 aaKnown RBP3.41□□□□□ -1.86
SMARCAD1-202ENST00000359052 VGFO15240 615 aaPredicted RBP3.4□□□□□ -1.86
SMARCAD1-202ENST00000359052 NPAS4Q8IUM7 802 aa3.4□□□□□ -1.86
SMARCAD1-202ENST00000359052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.4□□□□□ -1.868e-7■■■■□ 20.5
SMARCAD1-202ENST00000359052 CACNB1Q02641 598 aaPredicted RBP3.4□□□□□ -1.87
SMARCAD1-202ENST00000359052 CCDC61Q9Y6R9 512 aa3.4□□□□□ -1.87
SMARCAD1-202ENST00000359052 FECHP22830 423 aa3.4□□□□□ -1.87
SMARCAD1-202ENST00000359052 FBXO33Q7Z6M2 555 aa3.4□□□□□ -1.87
SMARCAD1-202ENST00000359052 RETREG2Q8NC44 543 aa3.39□□□□□ -1.87
SMARCAD1-202ENST00000359052 COG6Q9Y2V7 657 aa3.39□□□□□ -1.87
SMARCAD1-202ENST00000359052 CHMP4AQ9BY43 222 aa3.39□□□□□ -1.87
SMARCAD1-202ENST00000359052 RGS20O76081 388 aa3.38□□□□□ -1.87
SMARCAD1-202ENST00000359052 TSPYL2Q9H2G4 693 aaPredicted RBP3.38□□□□□ -1.87
SMARCAD1-202ENST00000359052 SMARCA4P51532 1647 aa3.38□□□□□ -1.87
SMARCAD1-202ENST00000359052 RBM26Q5T8P6 1007 aaKnown RBP3.38□□□□□ -1.87
SMARCAD1-202ENST00000359052 NBR1Q14596 966 aa3.38□□□□□ -1.87
SMARCAD1-202ENST00000359052 SH3D19Q5HYK7 790 aa3.37□□□□□ -1.87
SMARCAD1-202ENST00000359052 ELOAQ14241 798 aaKnown RBP3.36□□□□□ -1.87
SMARCAD1-202ENST00000359052 UCN2Q96RP3 112 aa3.36□□□□□ -1.87
SMARCAD1-202ENST00000359052 CHIC2Q9UKJ5 165 aa3.36□□□□□ -1.87
SMARCAD1-202ENST00000359052 BAZ1AQ9NRL2 1556 aaPredicted RBP3.36□□□□□ -1.87
SMARCAD1-202ENST00000359052 RAD51AP2Q09MP3 1159 aa3.36□□□□□ -1.87
SMARCAD1-202ENST00000359052 IRF6O14896 467 aa3.35□□□□□ -1.87
SMARCAD1-202ENST00000359052 KCNA1Q09470 495 aa3.35□□□□□ -1.87
SMARCAD1-202ENST00000359052 MTMR14Q8NCE2 650 aa3.35□□□□□ -1.87
SMARCAD1-202ENST00000359052 KCTD17Q8N5Z5 321 aa3.35□□□□□ -1.87
SMARCAD1-202ENST00000359052 BIVM-ERCC5R4GMW8 1640 aa3.34□□□□□ -1.87
SMARCAD1-202ENST00000359052 MAMSTRQ6ZN01 415 aa3.34□□□□□ -1.87
SMARCAD1-202ENST00000359052 FAM177A1Q8N128 213 aaPredicted RBP3.34□□□□□ -1.87
SMARCAD1-202ENST00000359052 FLIIQ13045 1269 aa3.34□□□□□ -1.88
SMARCAD1-202ENST00000359052 E2F4Q16254 413 aa3.34□□□□□ -1.88
SMARCAD1-202ENST00000359052 MAP2K5Q13163 448 aa3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 SLC52A1Q9NWF4 448 aa3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 PTGDRQ13258 359 aa3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 MRPL58Q14197 206 aaKnown RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 PROSER2Q86WR7 435 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 ANO8Q9HCE9 1232 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 FXR2P51116 673 aaKnown RBP eCLIP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 MFAP1P55081 439 aaKnown RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 LCE2DQ5TA82 110 aaPredicted RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 TARBP1Q13395 1621 aaKnown RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 SHROOM2Q13796 1616 aa3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 CCDC9Q9Y3X0 531 aaKnown RBP3.33□□□□□ -1.88
SMARCAD1-202ENST00000359052 SPDYE2BA6NHP3 402 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 SPDYE6P0CI01 402 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 SPDYE2Q495Y8 402 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 KIF21AQ7Z4S6 1674 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 BRD1O95696 1058 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 GMLQ99445 158 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 ALG2Q9H553 416 aa3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 QTRT2Q9H974 415 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 METTL16Q86W50 562 aaKnown RBP3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 MINK1Q8N4C8 1332 aaPredicted RBP3.32□□□□□ -1.88
SMARCAD1-202ENST00000359052 NEUROD2Q15784 382 aa3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 FOXD4L5Q5VV16 416 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 FOXD4L4Q8WXT5 416 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 BCL11BQ9C0K0 894 aaPredicted RBP3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 SND1Q7KZF4 910 aaKnown RBP eCLIP3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 ZMIZ1Q9ULJ6 1067 aa3.31□□□□□ -1.88
SMARCAD1-202ENST00000359052 KANK4Q5T7N3 995 aaPredicted RBP3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 BANK1Q8NDB2 785 aa3.3□□□□□ -1.88
SMARCAD1-202ENST00000359052 APBB1O00213 710 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms