RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 MICALL2Q8IY33 904 aa11.05□□□□□ -0.64
CCL20-201ENST00000358813 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
CCL20-201ENST00000358813 C3orf67Q6ZVT6 689 aa11.03□□□□□ -0.64
CCL20-201ENST00000358813 TMEM121BQ9BXQ6 578 aaPredicted RBP11.02□□□□□ -0.65
CCL20-201ENST00000358813 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
CCL20-201ENST00000358813 EIF2AK3Q9NZJ5 1116 aaKnown RBP11□□□□□ -0.65
CCL20-201ENST00000358813 TSHZ2Q9NRE2 1034 aa10.99□□□□□ -0.65
CCL20-201ENST00000358813 OTUD5Q96G74 571 aa10.95□□□□□ -0.66
CCL20-201ENST00000358813 NBR1Q14596 966 aa10.93□□□□□ -0.66
CCL20-201ENST00000358813 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
CCL20-201ENST00000358813 CADPS2Q86UW7 1296 aa10.9□□□□□ -0.66
CCL20-201ENST00000358813 TMC2Q8TDI7 906 aa10.9□□□□□ -0.66
CCL20-201ENST00000358813 TMEM92Q6UXU6 159 aa10.89□□□□□ -0.67
CCL20-201ENST00000358813 PDE4AP27815 886 aa10.87□□□□□ -0.67
CCL20-201ENST00000358813 C2orf72A6NCS6 295 aa10.85□□□□□ -0.67
CCL20-201ENST00000358813 NCKAP5LQ9HCH0 1330 aa10.84□□□□□ -0.67
CCL20-201ENST00000358813 CRISPLD2Q9H0B8 497 aa10.84□□□□□ -0.67
CCL20-201ENST00000358813 GPHNQ9NQX3 736 aaPredicted RBP10.84□□□□□ -0.67
CCL20-201ENST00000358813 KIF3CO14782 793 aa10.83□□□□□ -0.68
CCL20-201ENST00000358813 LARP6Q9BRS8 491 aaKnown RBP10.83□□□□□ -0.68
CCL20-201ENST00000358813 DDX27Q96GQ7 796 aaKnown RBP10.79□□□□□ -0.68
CCL20-201ENST00000358813 CCDC180Q9P1Z9 1646 aa10.78□□□□□ -0.68
CCL20-201ENST00000358813 FOXK1P85037 733 aa10.78□□□□□ -0.68
CCL20-201ENST00000358813 DSG2Q14126 1118 aa10.78□□□□□ -0.68
CCL20-201ENST00000358813 WDR70Q9NW82 654 aa10.78□□□□□ -0.68
CCL20-201ENST00000358813 PPP1R15BQ5SWA1 713 aa10.77□□□□□ -0.69
CCL20-201ENST00000358813 PLPP6Q8IY26 295 aa10.77□□□□□ -0.69
CCL20-201ENST00000358813 SNPHO15079 494 aa10.75□□□□□ -0.69
CCL20-201ENST00000358813 MFSD10Q14728 455 aa10.75□□□□□ -0.69
CCL20-201ENST00000358813 ERICH6Q7L0X2 663 aa10.74□□□□□ -0.69
CCL20-201ENST00000358813 DOK7Q18PE1 504 aa10.72□□□□□ -0.69
CCL20-201ENST00000358813 TIMELESSQ9UNS1 1208 aa10.7□□□□□ -0.7
CCL20-201ENST00000358813 GTF3C3Q9Y5Q9 886 aa10.7□□□□□ -0.7
CCL20-201ENST00000358813 TULP1O00294 542 aaPredicted RBP10.69□□□□□ -0.7
CCL20-201ENST00000358813 HOXB3P14651 431 aaPredicted RBP10.69□□□□□ -0.7
CCL20-201ENST00000358813 RIMBP2O15034 1052 aa10.68□□□□□ -0.7
CCL20-201ENST00000358813 ZNF710Q8N1W2 664 aa10.68□□□□□ -0.7
CCL20-201ENST00000358813 E2F4Q16254 413 aa10.66□□□□□ -0.7
CCL20-201ENST00000358813 FAM163AQ96GL9 167 aaPredicted RBP10.66□□□□□ -0.7
CCL20-201ENST00000358813 SLC34A2O95436 690 aa10.65□□□□□ -0.7
CCL20-201ENST00000358813 UPF1Q92900 1129 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCL20-201ENST00000358813 TBC1D12O60347 775 aa10.62□□□□□ -0.71
CCL20-201ENST00000358813 CAMK2BQ13554 666 aa10.62□□□□□ -0.71
CCL20-201ENST00000358813 ZSWIM6Q9HCJ5 1215 aa10.62□□□□□ -0.71
CCL20-201ENST00000358813 PTCD2Q8WV60 388 aaKnown RBP10.61□□□□□ -0.71
CCL20-201ENST00000358813 ST18O60284 1047 aa10.6□□□□□ -0.71
CCL20-201ENST00000358813 OXER1Q8TDS5 423 aa10.6□□□□□ -0.71
CCL20-201ENST00000358813 EMILIN3Q9NT22 766 aa10.6□□□□□ -0.71
CCL20-201ENST00000358813 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
CCL20-201ENST00000358813 ARSIQ5FYB1 569 aa10.59□□□□□ -0.71
CCL20-201ENST00000358813 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
CCL20-201ENST00000358813 TMEM132AQ24JP5 1023 aa10.58□□□□□ -0.72
CCL20-201ENST00000358813 ARXQ96QS3 562 aa10.58□□□□□ -0.72
CCL20-201ENST00000358813 GPR153Q6NV75 609 aa10.57□□□□□ -0.72
CCL20-201ENST00000358813 P3H3Q8IVL6 736 aa10.57□□□□□ -0.72
CCL20-201ENST00000358813 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CCL20-201ENST00000358813 HOXB1P14653 301 aaPredicted RBP10.56□□□□□ -0.72
CCL20-201ENST00000358813 KCNV2Q8TDN2 545 aa10.56□□□□□ -0.72
CCL20-201ENST00000358813 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCL20-201ENST00000358813 NUDT7P0C024 238 aa10.53□□□□□ -0.72
CCL20-201ENST00000358813 LCE2DQ5TA82 110 aaPredicted RBP10.52□□□□□ -0.73
CCL20-201ENST00000358813 ARHGEF1Q92888 912 aaKnown RBP10.52□□□□□ -0.73
CCL20-201ENST00000358813 ZNF316A6NFI3 1004 aaPredicted RBP10.51□□□□□ -0.73
CCL20-201ENST00000358813 EVI5O60447 810 aa10.51□□□□□ -0.73
CCL20-201ENST00000358813 MARVELD3Q96A59 401 aa10.51□□□□□ -0.73
CCL20-201ENST00000358813 ARIH1Q9Y4X5 557 aaPredicted RBP10.51□□□□□ -0.73
CCL20-201ENST00000358813 EMP3P54852 163 aa10.5□□□□□ -0.73
CCL20-201ENST00000358813 SPDYE16A6NNV3 312 aaPredicted RBP10.47□□□□□ -0.73
CCL20-201ENST00000358813 KDM4FA0A1W2PPD8 638 aa10.46□□□□□ -0.73
CCL20-201ENST00000358813 RB1CC1Q8TDY2 1594 aa10.45□□□□□ -0.74
CCL20-201ENST00000358813 ERBB3P21860 1342 aa10.45□□□□□ -0.74
CCL20-201ENST00000358813 PDIA6Q15084 440 aa10.45□□□□□ -0.74
CCL20-201ENST00000358813 LHX6Q9UPM6 363 aa10.45□□□□□ -0.74
CCL20-201ENST00000358813 FAM205CA6NFA0 338 aa10.44□□□□□ -0.74
CCL20-201ENST00000358813 ANO8Q9HCE9 1232 aaPredicted RBP10.44□□□□□ -0.74
CCL20-201ENST00000358813 DAXXQ9UER7 740 aaPredicted RBP10.43□□□□□ -0.74
CCL20-201ENST00000358813 VARS2Q5ST30 1063 aaKnown RBP10.41□□□□□ -0.74
CCL20-201ENST00000358813 C14orf37Q86TY3 774 aa10.41□□□□□ -0.74
CCL20-201ENST00000358813 PSDA5PKW4 1024 aaPredicted RBP10.39□□□□□ -0.75
CCL20-201ENST00000358813 POTEMA6NI47 508 aa10.39□□□□□ -0.75
CCL20-201ENST00000358813 POTEGQ6S5H5 508 aa10.39□□□□□ -0.75
CCL20-201ENST00000358813 DDX12PQ92771 950 aa10.39□□□□□ -0.75
CCL20-201ENST00000358813 HS3ST6Q96QI5 342 aa10.39□□□□□ -0.75
CCL20-201ENST00000358813 PTGER2P43116 358 aa10.38□□□□□ -0.75
CCL20-201ENST00000358813 ZNF454Q8N9F8 522 aa10.38□□□□□ -0.75
CCL20-201ENST00000358813 SEMA3EO15041 775 aa10.37□□□□□ -0.75
CCL20-201ENST00000358813 PPP4R3BQ5MIZ7 849 aa10.37□□□□□ -0.75
CCL20-201ENST00000358813 JPH4Q96JJ6 628 aa10.37□□□□□ -0.75
CCL20-201ENST00000358813 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
CCL20-201ENST00000358813 FOSBP53539 338 aa10.36□□□□□ -0.75
CCL20-201ENST00000358813 HOMEZQ8IX15 550 aa10.36□□□□□ -0.75
CCL20-201ENST00000358813 POTEB3A0JP26 581 aa10.34□□□□□ -0.75
CCL20-201ENST00000358813 PHF14O94880 888 aa10.34□□□□□ -0.75
CCL20-201ENST00000358813 POTEBQ6S5H4 581 aa10.34□□□□□ -0.75
CCL20-201ENST00000358813 PCDHGA10Q9Y5H3 936 aa10.34□□□□□ -0.75
CCL20-201ENST00000358813 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
CCL20-201ENST00000358813 LMOD2Q6P5Q4 547 aa10.33□□□□□ -0.76
CCL20-201ENST00000358813 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
CCL20-201ENST00000358813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.32□□□□□ -0.76
CCL20-201ENST00000358813 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms