RNA–Protein interactions for RNA: ENST00000358506.6

PPP1CB-202, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PPP1CB, Length 4,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-202ENST00000358506 ZNF644Q9H582 1327 aaPredicted RBP21.91■■□□□ 1.1
PPP1CB-202ENST00000358506 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
PPP1CB-202ENST00000358506 CFAP53Q96M91 514 aa21.9■■□□□ 1.1
PPP1CB-202ENST00000358506 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
PPP1CB-202ENST00000358506 KIF3BO15066 747 aa21.87■■□□□ 1.09
PPP1CB-202ENST00000358506 SPAG9O60271 1321 aaKnown RBP21.87■■□□□ 1.09
PPP1CB-202ENST00000358506 NCOA2Q15596 1464 aa21.87■■□□□ 1.09
PPP1CB-202ENST00000358506 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
PPP1CB-202ENST00000358506 POGKQ9P215 609 aa21.86■■□□□ 1.09
PPP1CB-202ENST00000358506 TNNT2P45379 298 aaPredicted RBP21.86■■□□□ 1.09
PPP1CB-202ENST00000358506 PPP4R2Q9NY27 417 aa21.86■■□□□ 1.09
PPP1CB-202ENST00000358506 NEUROD2Q15784 382 aa21.84■■□□□ 1.09
PPP1CB-202ENST00000358506 DNAJC5BQ9UF47 199 aa21.84■■□□□ 1.09
PPP1CB-202ENST00000358506 DNMBPQ6XZF7 1577 aa21.84■■□□□ 1.09
PPP1CB-202ENST00000358506 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
PPP1CB-202ENST00000358506 UPF2Q9HAU5 1272 aaKnown RBP21.8■■□□□ 1.08
PPP1CB-202ENST00000358506 UACAQ9BZF9 1416 aa21.8■■□□□ 1.08
PPP1CB-202ENST00000358506 PPM1GO15355 546 aaPredicted RBP21.8■■□□□ 1.08
PPP1CB-202ENST00000358506 EFCAB5A4FU69 1503 aa21.8■■□□□ 1.08
PPP1CB-202ENST00000358506 MLECQ14165 292 aa21.79■■□□□ 1.08
PPP1CB-202ENST00000358506 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
PPP1CB-202ENST00000358506 KTN1Q86UP2 1357 aaKnown RBP21.77■■□□□ 1.08
PPP1CB-202ENST00000358506 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
PPP1CB-202ENST00000358506 SAFB2Q14151 953 aaKnown RBP eCLIP21.75■■□□□ 1.07
PPP1CB-202ENST00000358506 TIAM1Q13009 1591 aa21.75■■□□□ 1.07
PPP1CB-202ENST00000358506 ST20-MTHFSA0A0A6YYL1 179 aa21.74■■□□□ 1.07
PPP1CB-202ENST00000358506 RALBP1Q15311 655 aa21.73■■□□□ 1.07
PPP1CB-202ENST00000358506 PRDM2Q13029 1718 aa21.73■■□□□ 1.07
PPP1CB-202ENST00000358506 IFT140Q96RY7 1462 aa21.72■■□□□ 1.07
PPP1CB-202ENST00000358506 CCDC144AA2RUR9 1427 aa21.71■■□□□ 1.07
PPP1CB-202ENST00000358506 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
PPP1CB-202ENST00000358506 SRPK2P78362 688 aaKnown RBP21.7■■□□□ 1.06
PPP1CB-202ENST00000358506 C14orf37Q86TY3 774 aa21.69■■□□□ 1.06
PPP1CB-202ENST00000358506 STK26Q9P289 416 aa21.69■■□□□ 1.06
PPP1CB-202ENST00000358506 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
PPP1CB-202ENST00000358506 MAPK8IP3Q9UPT6 1336 aa21.68■■□□□ 1.06
PPP1CB-202ENST00000358506 PLEKHG5O94827 1062 aa21.67■■□□□ 1.06
PPP1CB-202ENST00000358506 NBR1Q14596 966 aa21.67■■□□□ 1.06
PPP1CB-202ENST00000358506 U2SURPO15042 1029 aaKnown RBP21.67■■□□□ 1.06
PPP1CB-202ENST00000358506 PRKRIP1Q9H875 184 aaPredicted RBP21.65■■□□□ 1.06
PPP1CB-202ENST00000358506 KIF15Q9NS87 1388 aa21.65■■□□□ 1.06
PPP1CB-202ENST00000358506 USP47Q96K76 1375 aa21.64■■□□□ 1.06
PPP1CB-202ENST00000358506 LAMC3Q9Y6N6 1575 aa21.64■■□□□ 1.05
PPP1CB-202ENST00000358506 HSP90AA1P07900 732 aaKnown RBP21.63■■□□□ 1.05
PPP1CB-202ENST00000358506 WASHC2CQ9Y4E1 1318 aa21.63■■□□□ 1.05
PPP1CB-202ENST00000358506 ZBTB7CA1YPR0 619 aa21.63■■□□□ 1.05
PPP1CB-202ENST00000358506 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
PPP1CB-202ENST00000358506 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
PPP1CB-202ENST00000358506 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
PPP1CB-202ENST00000358506 FRAT1Q92837 279 aaPredicted RBP21.62■■□□□ 1.05
PPP1CB-202ENST00000358506 NLRP13Q86W25 1043 aa21.61■■□□□ 1.05
PPP1CB-202ENST00000358506 EHBP1L1Q8N3D4 1523 aa21.61■■□□□ 1.05
PPP1CB-202ENST00000358506 LAS1LQ9Y4W2 734 aaKnown RBP21.59■■□□□ 1.05
PPP1CB-202ENST00000358506 PRG4Q92954 1404 aaPredicted RBP21.59■■□□□ 1.05
PPP1CB-202ENST00000358506 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
PPP1CB-202ENST00000358506 MYH16Q9H6N6 1097 aa21.58■■□□□ 1.05
PPP1CB-202ENST00000358506 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.04
PPP1CB-202ENST00000358506 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
PPP1CB-202ENST00000358506 HFM1A2PYH4 1435 aa21.57■■□□□ 1.04
PPP1CB-202ENST00000358506 NUTM2DQ5VT03 806 aaPredicted RBP21.57■■□□□ 1.04
PPP1CB-202ENST00000358506 MIA2Q96PC5 1412 aa21.57■■□□□ 1.04
PPP1CB-202ENST00000358506 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
PPP1CB-202ENST00000358506 URB2Q14146 1524 aaKnown RBP21.54■■□□□ 1.04
PPP1CB-202ENST00000358506 RCAN3Q9UKA8 241 aa21.54■■□□□ 1.04
PPP1CB-202ENST00000358506 PCF11O94913 1555 aaKnown RBP21.54■■□□□ 1.04
PPP1CB-202ENST00000358506 ERICH6BQ5W0A0 696 aa21.54■■□□□ 1.04
PPP1CB-202ENST00000358506 PANK3Q9H999 370 aa21.54■■□□□ 1.04
PPP1CB-202ENST00000358506 TROQ12816 1431 aaPredicted RBP21.53■■□□□ 1.04
PPP1CB-202ENST00000358506 RGS3P49796 1198 aa21.53■■□□□ 1.04
PPP1CB-202ENST00000358506 SYNJ2O15056 1496 aa21.53■■□□□ 1.04
PPP1CB-202ENST00000358506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.52■■□□□ 1.042e-7■■■□□ 17.8
PPP1CB-202ENST00000358506 KIAA0586Q9BVV6 1533 aa21.52■■□□□ 1.04
PPP1CB-202ENST00000358506 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
PPP1CB-202ENST00000358506 CCDC7Q96M83 1385 aa21.51■■□□□ 1.03
PPP1CB-202ENST00000358506 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
PPP1CB-202ENST00000358506 HECW1Q76N89 1606 aa21.51■■□□□ 1.03
PPP1CB-202ENST00000358506 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
PPP1CB-202ENST00000358506 TRHP20396 242 aaPredicted RBP21.5■■□□□ 1.03
PPP1CB-202ENST00000358506 EPRSP07814 1512 aaKnown RBP21.5■■□□□ 1.03
PPP1CB-202ENST00000358506 CDK13Q14004 1512 aaKnown RBP21.49■■□□□ 1.03
PPP1CB-202ENST00000358506 CUL7Q14999 1698 aa21.49■■□□□ 1.03
PPP1CB-202ENST00000358506 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
PPP1CB-202ENST00000358506 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
PPP1CB-202ENST00000358506 HDGFL2Q7Z4V5 671 aaPredicted RBP21.48■■□□□ 1.03
PPP1CB-202ENST00000358506 DDRGK1Q96HY6 314 aa21.47■■□□□ 1.03
PPP1CB-202ENST00000358506 PNNQ9H307 717 aaKnown RBP21.47■■□□□ 1.03
PPP1CB-202ENST00000358506 RBM19Q9Y4C8 960 aaKnown RBP21.47■■□□□ 1.03
PPP1CB-202ENST00000358506 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
PPP1CB-202ENST00000358506 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.033e-16■■□□□ 12.8
PPP1CB-202ENST00000358506 AFAP1Q8N556 730 aa21.46■■□□□ 1.03
PPP1CB-202ENST00000358506 MAP3K1Q13233 1512 aa21.46■■□□□ 1.03
PPP1CB-202ENST00000358506 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
PPP1CB-202ENST00000358506 NAIPQ13075 1403 aa21.45■■□□□ 1.02
PPP1CB-202ENST00000358506 SOX12O15370 315 aa21.44■■□□□ 1.02
PPP1CB-202ENST00000358506 SUPT6HQ7KZ85 1726 aaKnown RBP21.44■■□□□ 1.02
PPP1CB-202ENST00000358506 ANP32EQ9BTT0 268 aa21.43■■□□□ 1.02
PPP1CB-202ENST00000358506 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
PPP1CB-202ENST00000358506 NBPF8Q3BBV2 869 aa21.42■■□□□ 1.02
PPP1CB-202ENST00000358506 DAPK1P53355 1430 aa21.42■■□□□ 1.02
PPP1CB-202ENST00000358506 LMOD2Q6P5Q4 547 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms