RNA–Protein interactions for RNA: ENST00000358161.9

SPTAN1-201, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTAN1, Length 7,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-201ENST00000358161 SAFB2Q14151 953 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTAN1-201ENST00000358161 MPHOSPH9Q99550 1183 aa13.37□□□□□ -0.27
SPTAN1-201ENST00000358161 KIF3BO15066 747 aa13.36□□□□□ -0.27
SPTAN1-201ENST00000358161 CDK11BP21127 795 aaKnown RBP13.36□□□□□ -0.27
SPTAN1-201ENST00000358161 EID1Q9Y6B2 187 aa13.36□□□□□ -0.27
SPTAN1-201ENST00000358161 GOLGA6L22H0YM25 854 aa13.35□□□□□ -0.27
SPTAN1-201ENST00000358161 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.274e-6■■■■□ 23.6
SPTAN1-201ENST00000358161 KTN1Q86UP2 1357 aaKnown RBP13.34□□□□□ -0.27
SPTAN1-201ENST00000358161 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
SPTAN1-201ENST00000358161 OS9Q13438 667 aaPredicted RBP13.34□□□□□ -0.27
SPTAN1-201ENST00000358161 FRAT1Q92837 279 aaPredicted RBP13.34□□□□□ -0.27
SPTAN1-201ENST00000358161 RAB3GAP2Q9H2M9 1393 aa13.33□□□□□ -0.27
SPTAN1-201ENST00000358161 WASHC2CQ9Y4E1 1318 aa13.33□□□□□ -0.28
SPTAN1-201ENST00000358161 SOX12O15370 315 aa13.33□□□□□ -0.28
SPTAN1-201ENST00000358161 ANP32EQ9BTT0 268 aa13.32□□□□□ -0.28
SPTAN1-201ENST00000358161 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
SPTAN1-201ENST00000358161 HSPA5P11021 654 aaKnown RBP13.31□□□□□ -0.28
SPTAN1-201ENST00000358161 FOXD1Q16676 465 aa13.31□□□□□ -0.28
SPTAN1-201ENST00000358161 PTPRGP23470 1445 aa13.31□□□□□ -0.28
SPTAN1-201ENST00000358161 SENP3-EIF4A1A0A087X0R7 540 aa13.31□□□□□ -0.28
SPTAN1-201ENST00000358161 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
SPTAN1-201ENST00000358161 CALD1Q05682 793 aaKnown RBP13.3□□□□□ -0.28
SPTAN1-201ENST00000358161 GOLGA2Q08379 1002 aa13.3□□□□□ -0.28
SPTAN1-201ENST00000358161 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
SPTAN1-201ENST00000358161 GAPVD1Q14C86 1478 aa13.3□□□□□ -0.28
SPTAN1-201ENST00000358161 NBR1Q14596 966 aa13.29□□□□□ -0.28
SPTAN1-201ENST00000358161 ZRSR1Q15695 479 aaKnown RBP13.28□□□□□ -0.28
SPTAN1-201ENST00000358161 CCER2I3L3R5 266 aa13.27□□□□□ -0.28
SPTAN1-201ENST00000358161 FGD5Q6ZNL6 1462 aa13.27□□□□□ -0.29
SPTAN1-201ENST00000358161 TERF2IPQ9NYB0 399 aa13.27□□□□□ -0.29
SPTAN1-201ENST00000358161 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
SPTAN1-201ENST00000358161 RALBP1Q15311 655 aa13.26□□□□□ -0.29
SPTAN1-201ENST00000358161 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
SPTAN1-201ENST00000358161 PPP4R2Q9NY27 417 aa13.26□□□□□ -0.29
SPTAN1-201ENST00000358161 CSB-PGBD3P0DP91 1061 aa13.26□□□□□ -0.29
SPTAN1-201ENST00000358161 PRDM2Q13029 1718 aa13.25□□□□□ -0.29
SPTAN1-201ENST00000358161 IPO8O15397 1037 aaKnown RBP13.23□□□□□ -0.29
SPTAN1-201ENST00000358161 CFAP44Q96MT7 982 aa13.23□□□□□ -0.29
SPTAN1-201ENST00000358161 KCNJ4P48050 445 aa13.22□□□□□ -0.29
SPTAN1-201ENST00000358161 FGD1P98174 961 aa13.22□□□□□ -0.29
SPTAN1-201ENST00000358161 NCAPD3P42695 1498 aa13.22□□□□□ -0.29
SPTAN1-201ENST00000358161 CCDC144AA2RUR9 1427 aa13.21□□□□□ -0.29
SPTAN1-201ENST00000358161 CYB5RLQ6IPT4 315 aa13.21□□□□□ -0.29
SPTAN1-201ENST00000358161 U2AF1L5P0DN76 240 aaPredicted RBP13.21□□□□□ -0.3
SPTAN1-201ENST00000358161 RGS3P49796 1198 aa13.21□□□□□ -0.3
SPTAN1-201ENST00000358161 U2AF1Q01081 240 aaKnown RBP eCLIP13.21□□□□□ -0.3
SPTAN1-201ENST00000358161 NGDNQ8NEJ9 315 aaKnown RBP13.2□□□□□ -0.3
SPTAN1-201ENST00000358161 CUX1P39880 1505 aa13.17□□□□□ -0.3
SPTAN1-201ENST00000358161 MCCP23508 829 aa13.17□□□□□ -0.3
SPTAN1-201ENST00000358161 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-201ENST00000358161 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
SPTAN1-201ENST00000358161 L3MBTL2Q969R5 705 aa13.16□□□□□ -0.3
SPTAN1-201ENST00000358161 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
SPTAN1-201ENST00000358161 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
SPTAN1-201ENST00000358161 RUSC2Q8N2Y8 1516 aa13.15□□□□□ -0.3
SPTAN1-201ENST00000358161 NUTM2DQ5VT03 806 aaPredicted RBP13.15□□□□□ -0.3
SPTAN1-201ENST00000358161 CCDC9Q9Y3X0 531 aaKnown RBP13.15□□□□□ -0.31
SPTAN1-201ENST00000358161 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
SPTAN1-201ENST00000358161 HDAC5Q9UQL6 1122 aa13.14□□□□□ -0.31
SPTAN1-201ENST00000358161 AMPHP49418 695 aa13.13□□□□□ -0.31
SPTAN1-201ENST00000358161 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
SPTAN1-201ENST00000358161 IGF1RP08069 1367 aa13.13□□□□□ -0.31
SPTAN1-201ENST00000358161 STK31Q9BXU1 1019 aa13.13□□□□□ -0.31
SPTAN1-201ENST00000358161 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
SPTAN1-201ENST00000358161 GRIN2BQ13224 1484 aa13.12□□□□□ -0.31
SPTAN1-201ENST00000358161 MYOM3Q5VTT5 1437 aa13.12□□□□□ -0.31
SPTAN1-201ENST00000358161 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
SPTAN1-201ENST00000358161 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
SPTAN1-201ENST00000358161 PTMAP06454 111 aaKnown RBP13.1□□□□□ -0.31
SPTAN1-201ENST00000358161 EVC2Q86UK5 1308 aa13.1□□□□□ -0.31
SPTAN1-201ENST00000358161 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
SPTAN1-201ENST00000358161 ZNF330Q9Y3S2 320 aaPredicted RBP13.1□□□□□ -0.31
SPTAN1-201ENST00000358161 AQRO60306 1485 aaKnown RBP eCLIP13.09□□□□□ -0.313e-7■■■□□ 18.7
SPTAN1-201ENST00000358161 FAM69CQ0P6D2 419 aa13.09□□□□□ -0.31
SPTAN1-201ENST00000358161 MRC2Q9UBG0 1479 aa13.09□□□□□ -0.31
SPTAN1-201ENST00000358161 CC2D2AQ9P2K1 1620 aa13.09□□□□□ -0.31
SPTAN1-201ENST00000358161 KIF15Q9NS87 1388 aa13.09□□□□□ -0.31
SPTAN1-201ENST00000358161 NLRP13Q86W25 1043 aa13.09□□□□□ -0.31
SPTAN1-201ENST00000358161 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
SPTAN1-201ENST00000358161 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
SPTAN1-201ENST00000358161 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
SPTAN1-201ENST00000358161 ITPRIPQ8IWB1 547 aa13.08□□□□□ -0.32
SPTAN1-201ENST00000358161 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
SPTAN1-201ENST00000358161 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
SPTAN1-201ENST00000358161 TAOK2Q9UL54 1235 aa13.07□□□□□ -0.32
SPTAN1-201ENST00000358161 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
SPTAN1-201ENST00000358161 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
SPTAN1-201ENST00000358161 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.07□□□□□ -0.32
SPTAN1-201ENST00000358161 GPATCH3Q96I76 525 aa13.06□□□□□ -0.32
SPTAN1-201ENST00000358161 TULP1O00294 542 aaPredicted RBP13.06□□□□□ -0.32
SPTAN1-201ENST00000358161 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
SPTAN1-201ENST00000358161 ERICH6BQ5W0A0 696 aa13.06□□□□□ -0.32
SPTAN1-201ENST00000358161 GOLGA6L4A6NEF3 574 aa13.05□□□□□ -0.32
SPTAN1-201ENST00000358161 COG3Q96JB2 828 aa13.05□□□□□ -0.32
SPTAN1-201ENST00000358161 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
SPTAN1-201ENST00000358161 HMGXB3Q12766 1538 aa13.05□□□□□ -0.32
SPTAN1-201ENST00000358161 SMC4Q9NTJ3 1288 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 HMMRO75330 724 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 NUTM2FA1L443 756 aa13.04□□□□□ -0.32
SPTAN1-201ENST00000358161 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms