RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 PLCH2O75038 1416 aa26.65■■□□□ 1.86
IFT20-202ENST00000357896 FER1L4A9Z1Z3 1794 aa26.63■■□□□ 1.85
IFT20-202ENST00000357896 ATP10AO60312 1499 aa26.63■■□□□ 1.85
IFT20-202ENST00000357896 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
IFT20-202ENST00000357896 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
IFT20-202ENST00000357896 EFCAB2Q5VUJ9 269 aa26.59■■□□□ 1.85
IFT20-202ENST00000357896 C9orf84Q5VXU9 1444 aa26.58■■□□□ 1.85
IFT20-202ENST00000357896 CDK13Q14004 1512 aaKnown RBP26.55■■□□□ 1.84
IFT20-202ENST00000357896 PREX1Q8TCU6 1659 aa26.55■■□□□ 1.84
IFT20-202ENST00000357896 CEBPAP49715 358 aaPredicted RBP26.54■■□□□ 1.84
IFT20-202ENST00000357896 CDK11AQ9UQ88 783 aaPredicted RBP26.54■■□□□ 1.84
IFT20-202ENST00000357896 DISP3Q9P2K9 1392 aa26.52■■□□□ 1.84
IFT20-202ENST00000357896 ATP1B4Q9UN42 357 aaPredicted RBP26.49■■□□□ 1.83
IFT20-202ENST00000357896 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
IFT20-202ENST00000357896 UHRF1BP1Q6BDS2 1440 aa26.48■■□□□ 1.83
IFT20-202ENST00000357896 SOCS7O14512 581 aa26.45■■□□□ 1.82
IFT20-202ENST00000357896 MYT1LQ9UL68 1186 aa26.45■■□□□ 1.82
IFT20-202ENST00000357896 FMN1Q68DA7 1419 aa26.45■■□□□ 1.82
IFT20-202ENST00000357896 MYO5CQ9NQX4 1742 aa26.45■■□□□ 1.82
IFT20-202ENST00000357896 AFAP1Q8N556 730 aa26.44■■□□□ 1.82
IFT20-202ENST00000357896 ILDR2Q71H61 639 aa26.43■■□□□ 1.82
IFT20-202ENST00000357896 STRCQ7RTU9 1775 aa26.42■■□□□ 1.82
IFT20-202ENST00000357896 SETD1BQ9UPS6 1966 aaKnown RBP26.42■■□□□ 1.82
IFT20-202ENST00000357896 ESF1Q9H501 851 aaKnown RBP26.39■■□□□ 1.82
IFT20-202ENST00000357896 ARHGAP5Q13017 1502 aa26.39■■□□□ 1.81
IFT20-202ENST00000357896 PTPRTO14522 1441 aa26.39■■□□□ 1.81
IFT20-202ENST00000357896 KDM5CP41229 1560 aa26.38■■□□□ 1.81
IFT20-202ENST00000357896 KIF14Q15058 1648 aa26.36■■□□□ 1.81
IFT20-202ENST00000357896 CLIP1P30622 1438 aa26.36■■□□□ 1.81
IFT20-202ENST00000357896 TROQ12816 1431 aaPredicted RBP26.36■■□□□ 1.81
IFT20-202ENST00000357896 UBTFP17480 764 aaKnown RBP26.35■■□□□ 1.81
IFT20-202ENST00000357896 REREQ9P2R6 1566 aa26.35■■□□□ 1.81
IFT20-202ENST00000357896 MLH3Q9UHC1 1453 aa26.32■■□□□ 1.8
IFT20-202ENST00000357896 DIP2CQ9Y2E4 1556 aa26.32■■□□□ 1.8
IFT20-202ENST00000357896 TRAPPC8Q9Y2L5 1435 aa26.31■■□□□ 1.8
IFT20-202ENST00000357896 ARHGAP35Q9NRY4 1499 aa26.28■■□□□ 1.8
IFT20-202ENST00000357896 AGLP35573 1532 aa26.28■■□□□ 1.8
IFT20-202ENST00000357896 C3P01024 1663 aa26.27■■□□□ 1.8
IFT20-202ENST00000357896 IQSEC2Q5JU85 1478 aa26.25■■□□□ 1.79
IFT20-202ENST00000357896 CNTLNQ9NXG0 1405 aa26.25■■□□□ 1.79
IFT20-202ENST00000357896 SPATA31D1Q6ZQQ2 1576 aa26.24■■□□□ 1.79
IFT20-202ENST00000357896 ABCA6Q8N139 1617 aa26.24■■□□□ 1.79
IFT20-202ENST00000357896 EHMT2Q96KQ7 1210 aa26.23■■□□□ 1.79
IFT20-202ENST00000357896 LTBP4Q8N2S1 1624 aa26.22■■□□□ 1.79
IFT20-202ENST00000357896 NCOA1Q15788 1441 aa26.21■■□□□ 1.79
IFT20-202ENST00000357896 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
IFT20-202ENST00000357896 ABCC1P33527 1531 aa26.18■■□□□ 1.78
IFT20-202ENST00000357896 NPATQ14207 1427 aa26.16■■□□□ 1.78
IFT20-202ENST00000357896 PREX2Q70Z35 1606 aa26.15■■□□□ 1.78
IFT20-202ENST00000357896 ITSN2Q9NZM3 1697 aa26.12■■□□□ 1.77
IFT20-202ENST00000357896 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
IFT20-202ENST00000357896 ZMYM3Q14202 1370 aa26.11■■□□□ 1.77
IFT20-202ENST00000357896 KIDINS220Q9ULH0 1771 aa26.11■■□□□ 1.77
IFT20-202ENST00000357896 CAMSAP1Q5T5Y3 1602 aa26.1■■□□□ 1.77
IFT20-202ENST00000357896 LRRIQ1Q96JM4 1722 aa26.1■■□□□ 1.77
IFT20-202ENST00000357896 CASKIN1Q8WXD9 1431 aa26.07■■□□□ 1.76
IFT20-202ENST00000357896 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
IFT20-202ENST00000357896 UBAP1LF5GYI3 381 aa26.06■■□□□ 1.76
IFT20-202ENST00000357896 PKD2Q13563 968 aa26.06■■□□□ 1.76
IFT20-202ENST00000357896 SPAG9O60271 1321 aaKnown RBP26.06■■□□□ 1.76
IFT20-202ENST00000357896 NCKAP5LQ9HCH0 1330 aa26.06■■□□□ 1.76
IFT20-202ENST00000357896 ZNF777Q9ULD5 760 aaPredicted RBP26.05■■□□□ 1.76
IFT20-202ENST00000357896 SAMD9LQ8IVG5 1584 aa26.03■■□□□ 1.76
IFT20-202ENST00000357896 ZNF335Q9H4Z2 1342 aaPredicted RBP26.03■■□□□ 1.76
IFT20-202ENST00000357896 CDC42BPAQ5VT25 1732 aa26.01■■□□□ 1.75
IFT20-202ENST00000357896 PLA2R1Q13018 1463 aa26■■□□□ 1.75
IFT20-202ENST00000357896 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
IFT20-202ENST00000357896 PPP6R1Q9UPN7 881 aa25.96■■□□□ 1.75
IFT20-202ENST00000357896 SYCP2Q9BX26 1530 aa25.95■■□□□ 1.74
IFT20-202ENST00000357896 GPATCH8Q9UKJ3 1502 aaKnown RBP25.95■■□□□ 1.74
IFT20-202ENST00000357896 KIAA1107Q9UPP5 1409 aa25.95■■□□□ 1.74
IFT20-202ENST00000357896 SUPT6HQ7KZ85 1726 aaKnown RBP25.94■■□□□ 1.74
IFT20-202ENST00000357896 TCOF1Q13428 1488 aaKnown RBP25.94■■□□□ 1.74
IFT20-202ENST00000357896 PTPRKQ15262 1439 aa25.94■■□□□ 1.74
IFT20-202ENST00000357896 A2MP01023 1474 aa25.93■■□□□ 1.74
IFT20-202ENST00000357896 PLEKHH2Q8IVE3 1493 aa25.93■■□□□ 1.74
IFT20-202ENST00000357896 GGT6Q6P531 493 aa25.93■■□□□ 1.74
IFT20-202ENST00000357896 ATP7AQ04656 1500 aa25.93■■□□□ 1.74
IFT20-202ENST00000357896 ZNF142P52746 1687 aaPredicted RBP25.93■■□□□ 1.74
IFT20-202ENST00000357896 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
IFT20-202ENST00000357896 CFDP1Q9UEE9 299 aaPredicted RBP25.92■■□□□ 1.74
IFT20-202ENST00000357896 CLTCQ00610 1675 aaKnown RBP25.92■■□□□ 1.74
IFT20-202ENST00000357896 MYO3AQ8NEV4 1616 aa25.92■■□□□ 1.74
IFT20-202ENST00000357896 FYCO1Q9BQS8 1478 aa25.91■■□□□ 1.74
IFT20-202ENST00000357896 PLXNC1O60486 1568 aa25.9■■□□□ 1.74
IFT20-202ENST00000357896 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
IFT20-202ENST00000357896 CCNB3Q8WWL7 1395 aa25.85■■□□□ 1.73
IFT20-202ENST00000357896 TOM1O60784 492 aa25.83■■□□□ 1.73
IFT20-202ENST00000357896 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
IFT20-202ENST00000357896 A2ML1A8K2U0 1454 aa25.82■■□□□ 1.72
IFT20-202ENST00000357896 SCAF1Q9H7N4 1312 aaKnown RBP25.82■■□□□ 1.72
IFT20-202ENST00000357896 HSPA1LP34931 641 aa25.79■■□□□ 1.72
IFT20-202ENST00000357896 PIP4K2BP78356 416 aa25.78■■□□□ 1.72
IFT20-202ENST00000357896 ADGBQ8N7X0 1667 aa25.77■■□□□ 1.72
IFT20-202ENST00000357896 CPS1P31327 1500 aa25.77■■□□□ 1.72
IFT20-202ENST00000357896 DNMT1P26358 1616 aaKnown RBP25.77■■□□□ 1.72
IFT20-202ENST00000357896 MTUS2Q5JR59 1369 aa25.75■■□□□ 1.71
IFT20-202ENST00000357896 RTEL1-TNFRSF6BF6WH68 1400 aa25.73■■□□□ 1.71
IFT20-202ENST00000357896 SHANK2Q9UPX8 1470 aa25.72■■□□□ 1.71
IFT20-202ENST00000357896 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms