RNA–Protein interactions for RNA: ENST00000356545.6

RSPO1-201, Transcript of R-spondin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RSPO1, Length 2,621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1-201ENST00000356545 LAMC3Q9Y6N6 1575 aa28.85■■■□□ 2.21
RSPO1-201ENST00000356545 EPRSP07814 1512 aaKnown RBP28.84■■■□□ 2.21
RSPO1-201ENST00000356545 ARID3CA6NKF2 412 aa28.84■■■□□ 2.21
RSPO1-201ENST00000356545 ANKRD30BQ9BXX2 1392 aa28.83■■■□□ 2.21
RSPO1-201ENST00000356545 MIA2Q96PC5 1412 aa28.83■■■□□ 2.21
RSPO1-201ENST00000356545 CDK13Q14004 1512 aaKnown RBP28.81■■■□□ 2.2
RSPO1-201ENST00000356545 KIF21AQ7Z4S6 1674 aa28.81■■■□□ 2.2
RSPO1-201ENST00000356545 KIF7Q2M1P5 1343 aa28.81■■■□□ 2.2
RSPO1-201ENST00000356545 RPRD2Q5VT52 1461 aaKnown RBP28.79■■■□□ 2.2
RSPO1-201ENST00000356545 ERICH6Q7L0X2 663 aa28.78■■■□□ 2.2
RSPO1-201ENST00000356545 SPATA31E1Q6ZUB1 1445 aa28.78■■■□□ 2.2
RSPO1-201ENST00000356545 TEX14Q8IWB6 1497 aa28.78■■■□□ 2.2
RSPO1-201ENST00000356545 DAPK1P53355 1430 aa28.7■■■□□ 2.18
RSPO1-201ENST00000356545 ROCK1Q13464 1354 aa28.69■■■□□ 2.18
RSPO1-201ENST00000356545 ZNF644Q9H582 1327 aaPredicted RBP28.69■■■□□ 2.18
RSPO1-201ENST00000356545 SLC4A1APQ9BWU0 796 aaKnown RBP28.68■■■□□ 2.18
RSPO1-201ENST00000356545 ABCC5O15440 1437 aa28.67■■■□□ 2.18
RSPO1-201ENST00000356545 WDR62O43379 1518 aa28.67■■■□□ 2.18
RSPO1-201ENST00000356545 IQGAP2Q13576 1575 aa28.66■■■□□ 2.18
RSPO1-201ENST00000356545 TARBP1Q13395 1621 aaKnown RBP28.65■■■□□ 2.18
RSPO1-201ENST00000356545 PDS5BQ9NTI5 1447 aa28.64■■■□□ 2.18
RSPO1-201ENST00000356545 DHX29Q7Z478 1369 aaKnown RBP28.61■■■□□ 2.17
RSPO1-201ENST00000356545 CNGB1Q14028 1251 aaPredicted RBP28.61■■■□□ 2.17
RSPO1-201ENST00000356545 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
RSPO1-201ENST00000356545 SMG6Q86US8 1419 aaKnown RBP28.58■■■□□ 2.17
RSPO1-201ENST00000356545 DNMT1P26358 1616 aaKnown RBP28.57■■■□□ 2.16
RSPO1-201ENST00000356545 POLR1AO95602 1720 aaPredicted RBP28.56■■■□□ 2.16
RSPO1-201ENST00000356545 PZPP20742 1482 aa28.53■■■□□ 2.16
RSPO1-201ENST00000356545 NUDCQ9Y266 331 aa28.52■■■□□ 2.16
RSPO1-201ENST00000356545 POLR3GLQ9BT43 218 aa28.52■■■□□ 2.16
RSPO1-201ENST00000356545 RNF123Q5XPI4 1314 aa28.51■■■□□ 2.15
RSPO1-201ENST00000356545 SENP3-EIF4A1A0A087X0R7 540 aa28.51■■■□□ 2.15
RSPO1-201ENST00000356545 PBRM1Q86U86 1689 aa28.51■■■□□ 2.15
RSPO1-201ENST00000356545 ADAMTS12P58397 1594 aa28.5■■■□□ 2.15
RSPO1-201ENST00000356545 USP47Q96K76 1375 aa28.49■■■□□ 2.15
RSPO1-201ENST00000356545 MBD5Q9P267 1494 aa28.48■■■□□ 2.15
RSPO1-201ENST00000356545 ZNF326Q5BKZ1 582 aaKnown RBP28.48■■■□□ 2.15
RSPO1-201ENST00000356545 BCORL1Q5H9F3 1711 aa28.48■■■□□ 2.15
RSPO1-201ENST00000356545 PAK3O75914 559 aaPredicted RBP28.47■■■□□ 2.15
RSPO1-201ENST00000356545 NUP153P49790 1475 aaKnown RBP28.46■■■□□ 2.15
RSPO1-201ENST00000356545 NOP58Q9Y2X3 529 aaKnown RBP28.46■■■□□ 2.15
RSPO1-201ENST00000356545 CCDC136Q96JN2 1154 aa28.43■■■□□ 2.14
RSPO1-201ENST00000356545 PNISRQ8TF01 805 aaKnown RBP28.42■■■□□ 2.14
RSPO1-201ENST00000356545 MYT1LQ9UL68 1186 aa28.42■■■□□ 2.14
RSPO1-201ENST00000356545 DEKP35659 375 aaKnown RBP28.4■■■□□ 2.14
RSPO1-201ENST00000356545 DISP1Q96F81 1524 aa28.4■■■□□ 2.14
RSPO1-201ENST00000356545 KIAA1107Q9UPP5 1409 aa28.4■■■□□ 2.14
RSPO1-201ENST00000356545 PKD2Q13563 968 aa28.39■■■□□ 2.13
RSPO1-201ENST00000356545 PRG4Q92954 1404 aaPredicted RBP28.36■■■□□ 2.13
RSPO1-201ENST00000356545 CFDP1Q9UEE9 299 aaPredicted RBP28.36■■■□□ 2.13
RSPO1-201ENST00000356545 CAMSAP2Q08AD1 1489 aa28.35■■■□□ 2.13
RSPO1-201ENST00000356545 KIAA0556O60303 1618 aa28.35■■■□□ 2.13
RSPO1-201ENST00000356545 ARID4BQ4LE39 1312 aaPredicted RBP28.34■■■□□ 2.13
RSPO1-201ENST00000356545 KDM5CP41229 1560 aa28.34■■■□□ 2.13
RSPO1-201ENST00000356545 NBR1Q14596 966 aa28.34■■■□□ 2.13
RSPO1-201ENST00000356545 TMC1Q8TDI8 760 aa28.33■■■□□ 2.13
RSPO1-201ENST00000356545 ZNF777Q9ULD5 760 aaPredicted RBP28.31■■■□□ 2.12
RSPO1-201ENST00000356545 KIAA0586Q9BVV6 1533 aa28.31■■■□□ 2.12
RSPO1-201ENST00000356545 KIF14Q15058 1648 aa28.3■■■□□ 2.12
RSPO1-201ENST00000356545 RAPGEF6Q8TEU7 1601 aa28.3■■■□□ 2.12
RSPO1-201ENST00000356545 TROQ12816 1431 aaPredicted RBP28.29■■■□□ 2.12
RSPO1-201ENST00000356545 GPATCH8Q9UKJ3 1502 aaKnown RBP28.28■■■□□ 2.12
RSPO1-201ENST00000356545 IPO9Q96P70 1041 aaKnown RBP28.27■■■□□ 2.12
RSPO1-201ENST00000356545 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.12
RSPO1-201ENST00000356545 ADGRL2O95490 1459 aa28.26■■■□□ 2.11
RSPO1-201ENST00000356545 CARD11Q9BXL7 1154 aa28.25■■■□□ 2.11
RSPO1-201ENST00000356545 ROCK2O75116 1388 aaKnown RBP28.25■■■□□ 2.11
RSPO1-201ENST00000356545 UHRF1BP1Q6BDS2 1440 aa28.25■■■□□ 2.11
RSPO1-201ENST00000356545 ANP32AP39687 249 aaKnown RBP28.24■■■□□ 2.11
RSPO1-201ENST00000356545 LRPPRCP42704 1394 aaKnown RBP28.24■■■□□ 2.11
RSPO1-201ENST00000356545 RALGAPBQ86X10 1494 aa28.23■■■□□ 2.11
RSPO1-201ENST00000356545 ANKRD50Q9ULJ7 1429 aa28.22■■■□□ 2.11
RSPO1-201ENST00000356545 ADGBQ8N7X0 1667 aa28.22■■■□□ 2.11
RSPO1-201ENST00000356545 ANKRD30AQ9BXX3 1397 aa28.22■■■□□ 2.11
RSPO1-201ENST00000356545 KIF15Q9NS87 1388 aa28.22■■■□□ 2.11
RSPO1-201ENST00000356545 ST20-MTHFSA0A0A6YYL1 179 aa28.21■■■□□ 2.11
RSPO1-201ENST00000356545 PLB1Q6P1J6 1458 aa28.17■■■□□ 2.1
RSPO1-201ENST00000356545 NUP155O75694 1391 aa28.17■■■□□ 2.1
RSPO1-201ENST00000356545 KDM2AQ9Y2K7 1162 aa28.17■■■□□ 2.1
RSPO1-201ENST00000356545 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
RSPO1-201ENST00000356545 MYBBP1AQ9BQG0 1328 aaKnown RBP28.16■■■□□ 2.1
RSPO1-201ENST00000356545 BRD4O60885 1362 aaPredicted RBP28.16■■■□□ 2.1
RSPO1-201ENST00000356545 RRP1P56182 461 aaKnown RBP28.15■■■□□ 2.1
RSPO1-201ENST00000356545 ZBTB47Q9UFB7 747 aaPredicted RBP28.15■■■□□ 2.1
RSPO1-201ENST00000356545 ITSN2Q9NZM3 1697 aa28.14■■■□□ 2.1
RSPO1-201ENST00000356545 CROCC2H7BZ55 1655 aa28.14■■■□□ 2.1
RSPO1-201ENST00000356545 EXOC6Q8TAG9 804 aa28.14■■■□□ 2.09
RSPO1-201ENST00000356545 RALBP1Q15311 655 aa28.12■■■□□ 2.09
RSPO1-201ENST00000356545 GRIN2AQ12879 1464 aa28.12■■■□□ 2.09
RSPO1-201ENST00000356545 DCAF11Q8TEB1 546 aa28.1■■■□□ 2.09
RSPO1-201ENST00000356545 SALL2Q9Y467 1007 aaPredicted RBP28.1■■■□□ 2.09
RSPO1-201ENST00000356545 ARHGEF12Q9NZN5 1544 aa28.1■■■□□ 2.09
RSPO1-201ENST00000356545 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
RSPO1-201ENST00000356545 RCAN3Q9UKA8 241 aa28.08■■■□□ 2.09
RSPO1-201ENST00000356545 KTN1Q86UP2 1357 aaKnown RBP28.07■■■□□ 2.08
RSPO1-201ENST00000356545 ADCY10Q96PN6 1610 aa28.06■■■□□ 2.08
RSPO1-201ENST00000356545 C9orf84Q5VXU9 1444 aa28.04■■■□□ 2.08
RSPO1-201ENST00000356545 NPM2Q86SE8 214 aaKnown RBP28.01■■■□□ 2.07
RSPO1-201ENST00000356545 NLRP13Q86W25 1043 aa28.01■■■□□ 2.07
RSPO1-201ENST00000356545 E9PCH4 1651 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms