RNA–Protein interactions for RNA: ENST00000356020.2

LINC01565-201, Transcript of long intergenic non-protein coding RNA 1565, humanhuman

TSL 2 BASIC

Gene LINC01565, Length 2,697 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01565-201ENST00000356020 ZNF608Q9ULD9 1512 aaPredicted RBP21.72■■□□□ 1.07
LINC01565-201ENST00000356020 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
LINC01565-201ENST00000356020 ABCC5O15440 1437 aa21.72■■□□□ 1.07
LINC01565-201ENST00000356020 RPRD2Q5VT52 1461 aaKnown RBP21.71■■□□□ 1.07
LINC01565-201ENST00000356020 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
LINC01565-201ENST00000356020 L3MBTL2Q969R5 705 aa21.7■■□□□ 1.06
LINC01565-201ENST00000356020 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
LINC01565-201ENST00000356020 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
LINC01565-201ENST00000356020 NCOA1Q15788 1441 aa21.68■■□□□ 1.06
LINC01565-201ENST00000356020 GRIN2AQ12879 1464 aa21.67■■□□□ 1.06
LINC01565-201ENST00000356020 POLR1AO95602 1720 aaPredicted RBP21.66■■□□□ 1.06
LINC01565-201ENST00000356020 HNRNPUQ00839 825 aaKnown RBP eCLIP21.65■■□□□ 1.06
LINC01565-201ENST00000356020 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
LINC01565-201ENST00000356020 ITSN2Q9NZM3 1697 aa21.65■■□□□ 1.06
LINC01565-201ENST00000356020 FOXD1Q16676 465 aa21.64■■□□□ 1.06
LINC01565-201ENST00000356020 ADGBQ8N7X0 1667 aa21.63■■□□□ 1.05
LINC01565-201ENST00000356020 CCDC7Q96M83 1385 aa21.63■■□□□ 1.05
LINC01565-201ENST00000356020 CDK11AQ9UQ88 783 aaPredicted RBP21.63■■□□□ 1.05
LINC01565-201ENST00000356020 BCL11AQ9H165 835 aa21.61■■□□□ 1.05
LINC01565-201ENST00000356020 TROQ12816 1431 aaPredicted RBP21.6■■□□□ 1.05
LINC01565-201ENST00000356020 ZNF644Q9H582 1327 aaPredicted RBP21.6■■□□□ 1.05
LINC01565-201ENST00000356020 ADCY10Q96PN6 1610 aa21.6■■□□□ 1.05
LINC01565-201ENST00000356020 CAMSAP2Q08AD1 1489 aa21.59■■□□□ 1.05
LINC01565-201ENST00000356020 RBM19Q9Y4C8 960 aaKnown RBP21.59■■□□□ 1.05
LINC01565-201ENST00000356020 CROCC2H7BZ55 1655 aa21.58■■□□□ 1.05
LINC01565-201ENST00000356020 NBPF8Q3BBV2 869 aa21.58■■□□□ 1.04
LINC01565-201ENST00000356020 PZPP20742 1482 aa21.57■■□□□ 1.04
LINC01565-201ENST00000356020 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
LINC01565-201ENST00000356020 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
LINC01565-201ENST00000356020 C11orf95C9JLR9 678 aaPredicted RBP21.56■■□□□ 1.04
LINC01565-201ENST00000356020 PRG4Q92954 1404 aaPredicted RBP21.55■■□□□ 1.04
LINC01565-201ENST00000356020 ADGRL2O95490 1459 aa21.55■■□□□ 1.04
LINC01565-201ENST00000356020 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
LINC01565-201ENST00000356020 PRKRIP1Q9H875 184 aaPredicted RBP21.54■■□□□ 1.04
LINC01565-201ENST00000356020 CEP170Q5SW79 1584 aa21.53■■□□□ 1.04
LINC01565-201ENST00000356020 KIF14Q15058 1648 aa21.53■■□□□ 1.04
LINC01565-201ENST00000356020 GPATCH8Q9UKJ3 1502 aaKnown RBP21.52■■□□□ 1.04
LINC01565-201ENST00000356020 MBD5Q9P267 1494 aa21.52■■□□□ 1.04
LINC01565-201ENST00000356020 PLB1Q6P1J6 1458 aa21.5■■□□□ 1.03
LINC01565-201ENST00000356020 CCDC184Q52MB2 194 aa21.5■■□□□ 1.03
LINC01565-201ENST00000356020 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
LINC01565-201ENST00000356020 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
LINC01565-201ENST00000356020 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
LINC01565-201ENST00000356020 KIAA1107Q9UPP5 1409 aa21.48■■□□□ 1.03
LINC01565-201ENST00000356020 ERICH6BQ5W0A0 696 aa21.46■■□□□ 1.03
LINC01565-201ENST00000356020 MRS2Q9HD23 443 aa21.44■■□□□ 1.02
LINC01565-201ENST00000356020 CARMIL2Q6F5E8 1435 aa21.43■■□□□ 1.02
LINC01565-201ENST00000356020 ZBED9Q6R2W3 1325 aa21.43■■□□□ 1.02
LINC01565-201ENST00000356020 ANKRD30AQ9BXX3 1397 aa21.43■■□□□ 1.02
LINC01565-201ENST00000356020 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
LINC01565-201ENST00000356020 NUP160Q12769 1436 aa21.41■■□□□ 1.02
LINC01565-201ENST00000356020 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
LINC01565-201ENST00000356020 IRX6P78412 446 aaPredicted RBP21.4■■□□□ 1.02
LINC01565-201ENST00000356020 FAM9BQ8IZU0 186 aa21.4■■□□□ 1.02
LINC01565-201ENST00000356020 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
LINC01565-201ENST00000356020 FANCIQ9NVI1 1328 aa21.4■■□□□ 1.02
LINC01565-201ENST00000356020 BCORL1Q5H9F3 1711 aa21.39■■□□□ 1.02
LINC01565-201ENST00000356020 KDM5CP41229 1560 aa21.39■■□□□ 1.01
LINC01565-201ENST00000356020 ANKRD50Q9ULJ7 1429 aa21.39■■□□□ 1.01
LINC01565-201ENST00000356020 ABCA8O94911 1581 aa21.38■■□□□ 1.01
LINC01565-201ENST00000356020 USP47Q96K76 1375 aa21.37■■□□□ 1.01
LINC01565-201ENST00000356020 ZNF777Q9ULD5 760 aaPredicted RBP21.37■■□□□ 1.01
LINC01565-201ENST00000356020 ERCC6Q03468 1493 aa21.37■■□□□ 1.01
LINC01565-201ENST00000356020 ABCC10Q5T3U5 1492 aa21.36■■□□□ 1.01
LINC01565-201ENST00000356020 DHX29Q7Z478 1369 aaKnown RBP21.36■■□□□ 1.01
LINC01565-201ENST00000356020 PKD2Q13563 968 aa21.35■■□□□ 1.01
LINC01565-201ENST00000356020 KDM5DQ9BY66 1539 aa21.35■■□□□ 1.01
LINC01565-201ENST00000356020 UHRF1BP1Q6BDS2 1440 aa21.34■■□□□ 1.01
LINC01565-201ENST00000356020 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
LINC01565-201ENST00000356020 RALGAPBQ86X10 1494 aa21.33■■□□□ 1.01
LINC01565-201ENST00000356020 ARHGEF12Q9NZN5 1544 aa21.33■■□□□ 1
LINC01565-201ENST00000356020 C9orf84Q5VXU9 1444 aa21.33■■□□□ 1
LINC01565-201ENST00000356020 ARID4BQ4LE39 1312 aaPredicted RBP21.33■■□□□ 1
LINC01565-201ENST00000356020 JPH4Q96JJ6 628 aa21.32■■□□□ 1
LINC01565-201ENST00000356020 ATP10BO94823 1461 aa21.29■■□□□ 1
LINC01565-201ENST00000356020 MSH5O43196 834 aa21.29■■□□□ 1
LINC01565-201ENST00000356020 PLEKHD1A6NEE1 506 aa21.29■■□□□ 1
LINC01565-201ENST00000356020 ARHGEF5Q12774 1597 aa21.28■■□□□ 1
LINC01565-201ENST00000356020 FBLN2P98095 1184 aa21.27■■□□□ 1
LINC01565-201ENST00000356020 ZNF326Q5BKZ1 582 aaKnown RBP21.27■■□□□ 1
LINC01565-201ENST00000356020 NUP155O75694 1391 aa21.27■■□□□ 1
LINC01565-201ENST00000356020 ROCK2O75116 1388 aaKnown RBP21.27■■□□□ 1
LINC01565-201ENST00000356020 MYT1LQ9UL68 1186 aa21.25■□□□□ 0.99
LINC01565-201ENST00000356020 PTPRGP23470 1445 aa21.25■□□□□ 0.99
LINC01565-201ENST00000356020 SMG6Q86US8 1419 aaKnown RBP21.24■□□□□ 0.99
LINC01565-201ENST00000356020 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
LINC01565-201ENST00000356020 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
LINC01565-201ENST00000356020 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
LINC01565-201ENST00000356020 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
LINC01565-201ENST00000356020 POLR3GLQ9BT43 218 aa21.2■□□□□ 0.98
LINC01565-201ENST00000356020 PREX2Q70Z35 1606 aa21.19■□□□□ 0.98
LINC01565-201ENST00000356020 E9PCH4 1651 aa21.18■□□□□ 0.98
LINC01565-201ENST00000356020 CARD11Q9BXL7 1154 aa21.18■□□□□ 0.98
LINC01565-201ENST00000356020 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
LINC01565-201ENST00000356020 CCDC141Q6ZP82 1450 aa21.17■□□□□ 0.98
LINC01565-201ENST00000356020 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
LINC01565-201ENST00000356020 NUDCQ9Y266 331 aa21.16■□□□□ 0.98
LINC01565-201ENST00000356020 B4GALNT3Q6L9W6 998 aa21.15■□□□□ 0.98
LINC01565-201ENST00000356020 FAM135AQ9P2D6 1515 aa21.14■□□□□ 0.98
LINC01565-201ENST00000356020 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms