RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 AKNAQ7Z591 1439 aa22.39■■□□□ 1.18
MBD1-205ENST00000353909 GPATCH8Q9UKJ3 1502 aaKnown RBP22.39■■□□□ 1.18
MBD1-205ENST00000353909 ATP10BO94823 1461 aa22.39■■□□□ 1.17
MBD1-205ENST00000353909 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
MBD1-205ENST00000353909 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
MBD1-205ENST00000353909 TONSLQ96HA7 1378 aa22.37■■□□□ 1.17
MBD1-205ENST00000353909 CENPBP07199 599 aaPredicted RBP22.37■■□□□ 1.17
MBD1-205ENST00000353909 PLEKHD1A6NEE1 506 aa22.35■■□□□ 1.17
MBD1-205ENST00000353909 FOXD1Q16676 465 aa22.35■■□□□ 1.17
MBD1-205ENST00000353909 PTPRGP23470 1445 aa22.35■■□□□ 1.17
MBD1-205ENST00000353909 CAMSAP2Q08AD1 1489 aa22.35■■□□□ 1.17
MBD1-205ENST00000353909 MPHOSPH9Q99550 1183 aa22.33■■□□□ 1.17
MBD1-205ENST00000353909 ADCY10Q96PN6 1610 aa22.33■■□□□ 1.16
MBD1-205ENST00000353909 ROCK1Q13464 1354 aa22.31■■□□□ 1.16
MBD1-205ENST00000353909 ITSN2Q9NZM3 1697 aa22.29■■□□□ 1.16
MBD1-205ENST00000353909 ERCC6L2Q5T890 1561 aa22.28■■□□□ 1.16
MBD1-205ENST00000353909 KDM5BQ9UGL1 1544 aa22.27■■□□□ 1.16
MBD1-205ENST00000353909 ABCC10Q5T3U5 1492 aa22.26■■□□□ 1.15
MBD1-205ENST00000353909 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
MBD1-205ENST00000353909 DDX10Q13206 875 aaKnown RBP22.25■■□□□ 1.15
MBD1-205ENST00000353909 NCOA1Q15788 1441 aa22.23■■□□□ 1.15
MBD1-205ENST00000353909 GTF3C3Q9Y5Q9 886 aa22.22■■□□□ 1.15
MBD1-205ENST00000353909 SHROOM2Q13796 1616 aa22.22■■□□□ 1.15
MBD1-205ENST00000353909 SLC4A1APQ9BWU0 796 aaKnown RBP22.19■■□□□ 1.14
MBD1-205ENST00000353909 CROCC2H7BZ55 1655 aa22.16■■□□□ 1.14
MBD1-205ENST00000353909 HNRNPMP52272 730 aaKnown RBP eCLIP22.16■■□□□ 1.14
MBD1-205ENST00000353909 KCNH8Q96L42 1107 aa22.16■■□□□ 1.14
MBD1-205ENST00000353909 ANKRD30BQ9BXX2 1392 aa22.15■■□□□ 1.14
MBD1-205ENST00000353909 L3MBTL2Q969R5 705 aa22.15■■□□□ 1.14
MBD1-205ENST00000353909 ADGBQ8N7X0 1667 aa22.14■■□□□ 1.14
MBD1-205ENST00000353909 ADGRL2O95490 1459 aa22.14■■□□□ 1.13
MBD1-205ENST00000353909 PZPP20742 1482 aa22.12■■□□□ 1.13
MBD1-205ENST00000353909 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
MBD1-205ENST00000353909 C9orf84Q5VXU9 1444 aa22.1■■□□□ 1.13
MBD1-205ENST00000353909 CDC42BPBQ9Y5S2 1711 aa22.09■■□□□ 1.13
MBD1-205ENST00000353909 ANKRD50Q9ULJ7 1429 aa22.08■■□□□ 1.13
MBD1-205ENST00000353909 CLASP1Q7Z460 1538 aa22.07■■□□□ 1.12
MBD1-205ENST00000353909 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
MBD1-205ENST00000353909 RPRD2Q5VT52 1461 aaKnown RBP22.07■■□□□ 1.12
MBD1-205ENST00000353909 MBD5Q9P267 1494 aa22.07■■□□□ 1.12
MBD1-205ENST00000353909 TSPY4P0CV99 314 aa22.06■■□□□ 1.12
MBD1-205ENST00000353909 TSPY10P0CW01 314 aa22.06■■□□□ 1.12
MBD1-205ENST00000353909 TTC37Q6PGP7 1564 aa22.05■■□□□ 1.12
MBD1-205ENST00000353909 SAMD9LQ8IVG5 1584 aa22.05■■□□□ 1.12
MBD1-205ENST00000353909 PKD2Q13563 968 aa22.03■■□□□ 1.12
MBD1-205ENST00000353909 PREX2Q70Z35 1606 aa22.03■■□□□ 1.12
MBD1-205ENST00000353909 NBPF8Q3BBV2 869 aa22.03■■□□□ 1.12
MBD1-205ENST00000353909 SHANK2Q9UPX8 1470 aa22.03■■□□□ 1.12
MBD1-205ENST00000353909 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.03■■□□□ 1.12
MBD1-205ENST00000353909 HSPA5P11021 654 aaKnown RBP22.02■■□□□ 1.12
MBD1-205ENST00000353909 TEX14Q8IWB6 1497 aa22.02■■□□□ 1.11
MBD1-205ENST00000353909 KIF15Q9NS87 1388 aa22■■□□□ 1.11
MBD1-205ENST00000353909 NUP155O75694 1391 aa21.99■■□□□ 1.11
MBD1-205ENST00000353909 ARHGEF5Q12774 1597 aa21.98■■□□□ 1.11
MBD1-205ENST00000353909 ARHGAP5Q13017 1502 aa21.98■■□□□ 1.11
MBD1-205ENST00000353909 KIAA1107Q9UPP5 1409 aa21.98■■□□□ 1.11
MBD1-205ENST00000353909 SYCP2Q9BX26 1530 aa21.96■■□□□ 1.11
MBD1-205ENST00000353909 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
MBD1-205ENST00000353909 ZCCHC11Q5TAX3 1644 aaKnown RBP21.94■■□□□ 1.1
MBD1-205ENST00000353909 WASHC2AQ641Q2 1341 aa21.94■■□□□ 1.1
MBD1-205ENST00000353909 EIF4G2P78344 907 aaKnown RBP eCLIP21.93■■□□□ 1.1
MBD1-205ENST00000353909 C11orf95C9JLR9 678 aaPredicted RBP21.9■■□□□ 1.1
MBD1-205ENST00000353909 MYO5CQ9NQX4 1742 aa21.9■■□□□ 1.1
MBD1-205ENST00000353909 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.09
MBD1-205ENST00000353909 ANP32CO43423 234 aa21.88■■□□□ 1.09
MBD1-205ENST00000353909 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
MBD1-205ENST00000353909 RSPH4AQ5TD94 716 aa21.88■■□□□ 1.09
MBD1-205ENST00000353909 ZNF326Q5BKZ1 582 aaKnown RBP21.87■■□□□ 1.09
MBD1-205ENST00000353909 KDM5DQ9BY66 1539 aa21.84■■□□□ 1.09
MBD1-205ENST00000353909 PELP1Q8IZL8 1130 aaKnown RBP21.84■■□□□ 1.09
MBD1-205ENST00000353909 PLCH2O75038 1416 aa21.84■■□□□ 1.09
MBD1-205ENST00000353909 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.82■■□□□ 1.08
MBD1-205ENST00000353909 EFCAB2Q5VUJ9 269 aa21.8■■□□□ 1.08
MBD1-205ENST00000353909 SPATA31E1Q6ZUB1 1445 aa21.8■■□□□ 1.08
MBD1-205ENST00000353909 FAM135AQ9P2D6 1515 aa21.8■■□□□ 1.08
MBD1-205ENST00000353909 PLEKHH2Q8IVE3 1493 aa21.78■■□□□ 1.08
MBD1-205ENST00000353909 MAST1Q9Y2H9 1570 aa21.78■■□□□ 1.08
MBD1-205ENST00000353909 CCER2I3L3R5 266 aa21.78■■□□□ 1.08
MBD1-205ENST00000353909 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
MBD1-205ENST00000353909 CCDC7Q96M83 1385 aa21.76■■□□□ 1.07
MBD1-205ENST00000353909 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
MBD1-205ENST00000353909 AFAP1Q8N556 730 aa21.75■■□□□ 1.07
MBD1-205ENST00000353909 ABCC1P33527 1531 aa21.73■■□□□ 1.07
MBD1-205ENST00000353909 PLXNC1O60486 1568 aa21.72■■□□□ 1.07
MBD1-205ENST00000353909 KIF7Q2M1P5 1343 aa21.72■■□□□ 1.07
MBD1-205ENST00000353909 DCAF11Q8TEB1 546 aa21.71■■□□□ 1.07
MBD1-205ENST00000353909 WDR7Q9Y4E6 1490 aa21.71■■□□□ 1.07
MBD1-205ENST00000353909 UNC13BO14795 1591 aa21.7■■□□□ 1.06
MBD1-205ENST00000353909 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
MBD1-205ENST00000353909 PLA2R1Q13018 1463 aa21.69■■□□□ 1.06
MBD1-205ENST00000353909 USP47Q96K76 1375 aa21.69■■□□□ 1.06
MBD1-205ENST00000353909 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
MBD1-205ENST00000353909 DUOX2Q9NRD8 1548 aa21.67■■□□□ 1.06
MBD1-205ENST00000353909 RGL3Q3MIN7 710 aa21.67■■□□□ 1.06
MBD1-205ENST00000353909 UHRF1BP1Q6BDS2 1440 aa21.66■■□□□ 1.06
MBD1-205ENST00000353909 BCORL1Q5H9F3 1711 aa21.65■■□□□ 1.06
MBD1-205ENST00000353909 SPAG9O60271 1321 aaKnown RBP21.65■■□□□ 1.06
MBD1-205ENST00000353909 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
MBD1-205ENST00000353909 CCDC144AA2RUR9 1427 aa21.64■■□□□ 1.06
MBD1-205ENST00000353909 ASXL2Q76L83 1435 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms