RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 C11orf95C9JLR9 678 aaPredicted RBP22.01■■□□□ 1.11
PTBP1-202ENST00000350092 BCL11AQ9H165 835 aa22■■□□□ 1.11
PTBP1-202ENST00000350092 MPHOSPH9Q99550 1183 aa22■■□□□ 1.11
PTBP1-202ENST00000350092 IRX6P78412 446 aaPredicted RBP22■■□□□ 1.11
PTBP1-202ENST00000350092 ROCK1Q13464 1354 aa21.99■■□□□ 1.11
PTBP1-202ENST00000350092 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
PTBP1-202ENST00000350092 CHIC2Q9UKJ5 165 aa21.99■■□□□ 1.11
PTBP1-202ENST00000350092 L3MBTL2Q969R5 705 aa21.98■■□□□ 1.11
PTBP1-202ENST00000350092 DAPK1P53355 1430 aa21.97■■□□□ 1.11
PTBP1-202ENST00000350092 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
PTBP1-202ENST00000350092 CDK11AQ9UQ88 783 aaPredicted RBP21.95■■□□□ 1.1
PTBP1-202ENST00000350092 ZBED9Q6R2W3 1325 aa21.94■■□□□ 1.1
PTBP1-202ENST00000350092 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
PTBP1-202ENST00000350092 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
PTBP1-202ENST00000350092 MBD5Q9P267 1494 aa21.93■■□□□ 1.1
PTBP1-202ENST00000350092 NBPF8Q3BBV2 869 aa21.92■■□□□ 1.1
PTBP1-202ENST00000350092 ADGBQ8N7X0 1667 aa21.92■■□□□ 1.1
PTBP1-202ENST00000350092 ABCC5O15440 1437 aa21.91■■□□□ 1.1
PTBP1-202ENST00000350092 BCORL1Q5H9F3 1711 aa21.9■■□□□ 1.1
PTBP1-202ENST00000350092 KIAA0556O60303 1618 aa21.89■■□□□ 1.09
PTBP1-202ENST00000350092 CROCC2H7BZ55 1655 aa21.89■■□□□ 1.09
PTBP1-202ENST00000350092 FOXD1Q16676 465 aa21.88■■□□□ 1.09
PTBP1-202ENST00000350092 KIF7Q2M1P5 1343 aa21.87■■□□□ 1.09
PTBP1-202ENST00000350092 PZPP20742 1482 aa21.87■■□□□ 1.09
PTBP1-202ENST00000350092 KIF14Q15058 1648 aa21.86■■□□□ 1.09
PTBP1-202ENST00000350092 RAPGEF6Q8TEU7 1601 aa21.85■■□□□ 1.09
PTBP1-202ENST00000350092 DHX29Q7Z478 1369 aaKnown RBP21.83■■□□□ 1.09
PTBP1-202ENST00000350092 KDM5CP41229 1560 aa21.83■■□□□ 1.09
PTBP1-202ENST00000350092 NUP153P49790 1475 aaKnown RBP21.83■■□□□ 1.09
PTBP1-202ENST00000350092 DISP1Q96F81 1524 aa21.83■■□□□ 1.09
PTBP1-202ENST00000350092 MRS2Q9HD23 443 aa21.83■■□□□ 1.08
PTBP1-202ENST00000350092 ITSN2Q9NZM3 1697 aa21.82■■□□□ 1.08
PTBP1-202ENST00000350092 SMG6Q86US8 1419 aaKnown RBP21.81■■□□□ 1.08
PTBP1-202ENST00000350092 FAM9BQ8IZU0 186 aa21.81■■□□□ 1.08
PTBP1-202ENST00000350092 ADCY10Q96PN6 1610 aa21.8■■□□□ 1.08
PTBP1-202ENST00000350092 ADGRL2O95490 1459 aa21.76■■□□□ 1.07
PTBP1-202ENST00000350092 CAMSAP2Q08AD1 1489 aa21.76■■□□□ 1.07
PTBP1-202ENST00000350092 RNF123Q5XPI4 1314 aa21.75■■□□□ 1.07
PTBP1-202ENST00000350092 B4GALNT3Q6L9W6 998 aa21.75■■□□□ 1.07
PTBP1-202ENST00000350092 ZNF644Q9H582 1327 aaPredicted RBP21.73■■□□□ 1.07
PTBP1-202ENST00000350092 KIAA0586Q9BVV6 1533 aa21.72■■□□□ 1.07
PTBP1-202ENST00000350092 E9PCH4 1651 aa21.72■■□□□ 1.07
PTBP1-202ENST00000350092 KIAA1107Q9UPP5 1409 aa21.7■■□□□ 1.06
PTBP1-202ENST00000350092 SLC4A1APQ9BWU0 796 aaKnown RBP21.69■■□□□ 1.06
PTBP1-202ENST00000350092 MRC2Q9UBG0 1479 aa21.69■■□□□ 1.06
PTBP1-202ENST00000350092 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
PTBP1-202ENST00000350092 USP47Q96K76 1375 aa21.67■■□□□ 1.06
PTBP1-202ENST00000350092 CDC42BPAQ5VT25 1732 aa21.67■■□□□ 1.06
PTBP1-202ENST00000350092 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
PTBP1-202ENST00000350092 ARID3CA6NKF2 412 aa21.66■■□□□ 1.06
PTBP1-202ENST00000350092 TROQ12816 1431 aaPredicted RBP21.66■■□□□ 1.06
PTBP1-202ENST00000350092 ERICH6Q7L0X2 663 aa21.66■■□□□ 1.06
PTBP1-202ENST00000350092 GPATCH8Q9UKJ3 1502 aaKnown RBP21.65■■□□□ 1.06
PTBP1-202ENST00000350092 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
PTBP1-202ENST00000350092 ARID4BQ4LE39 1312 aaPredicted RBP21.65■■□□□ 1.06
PTBP1-202ENST00000350092 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
PTBP1-202ENST00000350092 ZNF608Q9ULD9 1512 aaPredicted RBP21.63■■□□□ 1.05
PTBP1-202ENST00000350092 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
PTBP1-202ENST00000350092 KDM5DQ9BY66 1539 aa21.62■■□□□ 1.05
PTBP1-202ENST00000350092 PRG4Q92954 1404 aaPredicted RBP21.62■■□□□ 1.05
PTBP1-202ENST00000350092 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
PTBP1-202ENST00000350092 GRIN2AQ12879 1464 aa21.61■■□□□ 1.05
PTBP1-202ENST00000350092 CEP170Q5SW79 1584 aa21.6■■□□□ 1.05
PTBP1-202ENST00000350092 MYT1LQ9UL68 1186 aa21.59■■□□□ 1.05
PTBP1-202ENST00000350092 EIF4G3O43432 1585 aaKnown RBP21.59■■□□□ 1.05
PTBP1-202ENST00000350092 LRPPRCP42704 1394 aaKnown RBP21.57■■□□□ 1.04
PTBP1-202ENST00000350092 SHANK2Q9UPX8 1470 aa21.57■■□□□ 1.04
PTBP1-202ENST00000350092 ROCK2O75116 1388 aaKnown RBP21.56■■□□□ 1.04
PTBP1-202ENST00000350092 PNISRQ8TF01 805 aaKnown RBP21.55■■□□□ 1.04
PTBP1-202ENST00000350092 NOP58Q9Y2X3 529 aaKnown RBP21.53■■□□□ 1.04
PTBP1-202ENST00000350092 PLB1Q6P1J6 1458 aa21.52■■□□□ 1.04
PTBP1-202ENST00000350092 ANKRD50Q9ULJ7 1429 aa21.51■■□□□ 1.03
PTBP1-202ENST00000350092 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
PTBP1-202ENST00000350092 PKD2Q13563 968 aa21.49■■□□□ 1.03
PTBP1-202ENST00000350092 ABCC10Q5T3U5 1492 aa21.49■■□□□ 1.03
PTBP1-202ENST00000350092 PAK3O75914 559 aaPredicted RBP21.49■■□□□ 1.03
PTBP1-202ENST00000350092 KIF15Q9NS87 1388 aa21.49■■□□□ 1.03
PTBP1-202ENST00000350092 CFDP1Q9UEE9 299 aaPredicted RBP21.49■■□□□ 1.03
PTBP1-202ENST00000350092 PTPRGP23470 1445 aa21.48■■□□□ 1.03
PTBP1-202ENST00000350092 TRPM1Q7Z4N2 1603 aa21.48■■□□□ 1.03
PTBP1-202ENST00000350092 KTN1Q86UP2 1357 aaKnown RBP21.47■■□□□ 1.03
PTBP1-202ENST00000350092 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
PTBP1-202ENST00000350092 ABCA8O94911 1581 aa21.47■■□□□ 1.03
PTBP1-202ENST00000350092 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
PTBP1-202ENST00000350092 ARHGEF5Q12774 1597 aa21.44■■□□□ 1.02
PTBP1-202ENST00000350092 DEKP35659 375 aaKnown RBP21.44■■□□□ 1.02
PTBP1-202ENST00000350092 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
PTBP1-202ENST00000350092 MAGI1Q96QZ7 1491 aaPredicted RBP21.42■■□□□ 1.02
PTBP1-202ENST00000350092 LAMC1P11047 1609 aa21.41■■□□□ 1.02
PTBP1-202ENST00000350092 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
PTBP1-202ENST00000350092 ZNF326Q5BKZ1 582 aaKnown RBP21.41■■□□□ 1.02
PTBP1-202ENST00000350092 IPO9Q96P70 1041 aaKnown RBP21.4■■□□□ 1.02
PTBP1-202ENST00000350092 PRKCSHP14314 528 aaPredicted RBP21.39■■□□□ 1.01
PTBP1-202ENST00000350092 TMC1Q8TDI8 760 aa21.38■■□□□ 1.01
PTBP1-202ENST00000350092 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
PTBP1-202ENST00000350092 CARD11Q9BXL7 1154 aa21.37■■□□□ 1.01
PTBP1-202ENST00000350092 NUP155O75694 1391 aa21.37■■□□□ 1.01
PTBP1-202ENST00000350092 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
PTBP1-202ENST00000350092 SYNJ2O15056 1496 aa21.37■■□□□ 1.01
PTBP1-202ENST00000350092 RALBP1Q15311 655 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms