RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 HECW1Q76N89 1606 aa30.86■■■□□ 2.53
KDM5C-201ENST00000349663 EFCAB2Q5VUJ9 269 aa30.84■■■□□ 2.53
KDM5C-201ENST00000349663 SIGLEC1Q9BZZ2 1709 aa30.84■■■□□ 2.53
KDM5C-201ENST00000349663 CDK11AQ9UQ88 783 aaPredicted RBP30.82■■■□□ 2.52
KDM5C-201ENST00000349663 UBTFP17480 764 aaKnown RBP30.81■■■□□ 2.52
KDM5C-201ENST00000349663 ATP10AO60312 1499 aa30.79■■■□□ 2.52
KDM5C-201ENST00000349663 FMN1Q68DA7 1419 aa30.78■■■□□ 2.52
KDM5C-201ENST00000349663 EHMT2Q96KQ7 1210 aa30.77■■■□□ 2.52
KDM5C-201ENST00000349663 CERKQ8TCT0 537 aa30.76■■■□□ 2.51
KDM5C-201ENST00000349663 C9orf84Q5VXU9 1444 aa30.74■■■□□ 2.51
KDM5C-201ENST00000349663 FER1L4A9Z1Z3 1794 aa30.74■■■□□ 2.51
KDM5C-201ENST00000349663 ARHGEF12Q9NZN5 1544 aa30.71■■■□□ 2.51
KDM5C-201ENST00000349663 CEBPAP49715 358 aaPredicted RBP30.69■■■□□ 2.5
KDM5C-201ENST00000349663 AFAP1Q8N556 730 aa30.68■■■□□ 2.5
KDM5C-201ENST00000349663 MYO5CQ9NQX4 1742 aa30.67■■■□□ 2.5
KDM5C-201ENST00000349663 ARHGAP35Q9NRY4 1499 aa30.67■■■□□ 2.5
KDM5C-201ENST00000349663 ZNF518AQ6AHZ1 1483 aa30.66■■■□□ 2.5
KDM5C-201ENST00000349663 MYT1LQ9UL68 1186 aa30.65■■■□□ 2.5
KDM5C-201ENST00000349663 TROQ12816 1431 aaPredicted RBP30.64■■■□□ 2.5
KDM5C-201ENST00000349663 ARHGAP5Q13017 1502 aa30.62■■■□□ 2.49
KDM5C-201ENST00000349663 KIF14Q15058 1648 aa30.62■■■□□ 2.49
KDM5C-201ENST00000349663 CLIP1P30622 1438 aa30.61■■■□□ 2.49
KDM5C-201ENST00000349663 DMRT2Q9Y5R5 561 aa30.6■■■□□ 2.49
KDM5C-201ENST00000349663 PREX1Q8TCU6 1659 aa30.58■■■□□ 2.49
KDM5C-201ENST00000349663 KDM5CP41229 1560 aa30.56■■■□□ 2.48
KDM5C-201ENST00000349663 UHRF1BP1Q6BDS2 1440 aa30.53■■■□□ 2.48
KDM5C-201ENST00000349663 MLH3Q9UHC1 1453 aa30.5■■■□□ 2.47
KDM5C-201ENST00000349663 SETD1BQ9UPS6 1966 aaKnown RBP30.49■■■□□ 2.47
KDM5C-201ENST00000349663 ESF1Q9H501 851 aaKnown RBP30.49■■■□□ 2.47
KDM5C-201ENST00000349663 DIP2CQ9Y2E4 1556 aa30.49■■■□□ 2.47
KDM5C-201ENST00000349663 REREQ9P2R6 1566 aa30.46■■■□□ 2.47
KDM5C-201ENST00000349663 STRCQ7RTU9 1775 aa30.44■■■□□ 2.46
KDM5C-201ENST00000349663 CHIC1Q5VXU3 224 aa30.44■■■□□ 2.46
KDM5C-201ENST00000349663 TRAPPC8Q9Y2L5 1435 aa30.44■■■□□ 2.46
KDM5C-201ENST00000349663 CDC42BPBQ9Y5S2 1711 aa30.43■■■□□ 2.46
KDM5C-201ENST00000349663 LRRIQ1Q96JM4 1722 aa30.42■■■□□ 2.46
KDM5C-201ENST00000349663 ABCA6Q8N139 1617 aa30.41■■■□□ 2.46
KDM5C-201ENST00000349663 AGLP35573 1532 aa30.4■■■□□ 2.46
KDM5C-201ENST00000349663 CASKIN1Q8WXD9 1431 aa30.39■■■□□ 2.45
KDM5C-201ENST00000349663 CCDC18Q5T9S5 1454 aa30.38■■■□□ 2.45
KDM5C-201ENST00000349663 ABCC1P33527 1531 aa30.37■■■□□ 2.45
KDM5C-201ENST00000349663 PTPRTO14522 1441 aa30.37■■■□□ 2.45
KDM5C-201ENST00000349663 PREX2Q70Z35 1606 aa30.36■■■□□ 2.45
KDM5C-201ENST00000349663 C3P01024 1663 aa30.35■■■□□ 2.45
KDM5C-201ENST00000349663 CNTLNQ9NXG0 1405 aa30.32■■■□□ 2.44
KDM5C-201ENST00000349663 DISP3Q9P2K9 1392 aa30.3■■■□□ 2.44
KDM5C-201ENST00000349663 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
KDM5C-201ENST00000349663 ZNF777Q9ULD5 760 aaPredicted RBP30.3■■■□□ 2.44
KDM5C-201ENST00000349663 KIDINS220Q9ULH0 1771 aa30.28■■■□□ 2.44
KDM5C-201ENST00000349663 SPAG9O60271 1321 aaKnown RBP30.24■■■□□ 2.43
KDM5C-201ENST00000349663 CDC42BPAQ5VT25 1732 aa30.23■■■□□ 2.43
KDM5C-201ENST00000349663 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
KDM5C-201ENST00000349663 NCOA1Q15788 1441 aa30.22■■■□□ 2.43
KDM5C-201ENST00000349663 ILDR2Q71H61 639 aa30.22■■■□□ 2.43
KDM5C-201ENST00000349663 SAMD9LQ8IVG5 1584 aa30.22■■■□□ 2.43
KDM5C-201ENST00000349663 FYCO1Q9BQS8 1478 aa30.21■■■□□ 2.43
KDM5C-201ENST00000349663 ZMYM3Q14202 1370 aa30.21■■■□□ 2.43
KDM5C-201ENST00000349663 NPATQ14207 1427 aa30.2■■■□□ 2.42
KDM5C-201ENST00000349663 GPATCH8Q9UKJ3 1502 aaKnown RBP30.19■■■□□ 2.42
KDM5C-201ENST00000349663 LTBP4Q8N2S1 1624 aa30.18■■■□□ 2.42
KDM5C-201ENST00000349663 SYCP2Q9BX26 1530 aa30.16■■■□□ 2.42
KDM5C-201ENST00000349663 CFDP1Q9UEE9 299 aaPredicted RBP30.15■■■□□ 2.42
KDM5C-201ENST00000349663 KIAA1107Q9UPP5 1409 aa30.13■■■□□ 2.41
KDM5C-201ENST00000349663 IQSEC2Q5JU85 1478 aa30.13■■■□□ 2.41
KDM5C-201ENST00000349663 SOCS7O14512 581 aa30.13■■■□□ 2.41
KDM5C-201ENST00000349663 CAMSAP1Q5T5Y3 1602 aa30.12■■■□□ 2.41
KDM5C-201ENST00000349663 MROH2AA6NES4 1674 aa30.12■■■□□ 2.41
KDM5C-201ENST00000349663 NCKAP5LQ9HCH0 1330 aa30.11■■■□□ 2.41
KDM5C-201ENST00000349663 PLEKHH2Q8IVE3 1493 aa30.09■■■□□ 2.41
KDM5C-201ENST00000349663 CCNB3Q8WWL7 1395 aa30.09■■■□□ 2.41
KDM5C-201ENST00000349663 SUPT6HQ7KZ85 1726 aaKnown RBP30.08■■■□□ 2.41
KDM5C-201ENST00000349663 GGT6Q6P531 493 aa30.08■■■□□ 2.41
KDM5C-201ENST00000349663 ATP7AQ04656 1500 aa30.07■■■□□ 2.4
KDM5C-201ENST00000349663 A2MP01023 1474 aa30.07■■■□□ 2.4
KDM5C-201ENST00000349663 PKD2Q13563 968 aa30.05■■■□□ 2.4
KDM5C-201ENST00000349663 PPP6R1Q9UPN7 881 aa30.04■■■□□ 2.4
KDM5C-201ENST00000349663 ZNF335Q9H4Z2 1342 aaPredicted RBP30.02■■■□□ 2.4
KDM5C-201ENST00000349663 PTPRKQ15262 1439 aa30.02■■■□□ 2.4
KDM5C-201ENST00000349663 PLXNC1O60486 1568 aa30.02■■■□□ 2.4
KDM5C-201ENST00000349663 MTUS2Q5JR59 1369 aa30.02■■■□□ 2.4
KDM5C-201ENST00000349663 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.39
KDM5C-201ENST00000349663 SPATA31D1Q6ZQQ2 1576 aa30■■■□□ 2.39
KDM5C-201ENST00000349663 INO80Q9ULG1 1556 aaPredicted RBP30■■■□□ 2.39
KDM5C-201ENST00000349663 PLA2R1Q13018 1463 aa29.99■■■□□ 2.39
KDM5C-201ENST00000349663 UBAP1LF5GYI3 381 aa29.98■■■□□ 2.39
KDM5C-201ENST00000349663 ZNF644Q9H582 1327 aaPredicted RBP29.96■■■□□ 2.39
KDM5C-201ENST00000349663 MYO3AQ8NEV4 1616 aa29.94■■■□□ 2.38
KDM5C-201ENST00000349663 CEP170BQ9Y4F5 1589 aaPredicted RBP29.94■■■□□ 2.38
KDM5C-201ENST00000349663 TCOF1Q13428 1488 aaKnown RBP29.93■■■□□ 2.38
KDM5C-201ENST00000349663 ZNF142P52746 1687 aaPredicted RBP29.92■■■□□ 2.38
KDM5C-201ENST00000349663 MBD5Q9P267 1494 aa29.88■■■□□ 2.37
KDM5C-201ENST00000349663 ADGBQ8N7X0 1667 aa29.88■■■□□ 2.37
KDM5C-201ENST00000349663 RTEL1-TNFRSF6BF6WH68 1400 aa29.88■■■□□ 2.37
KDM5C-201ENST00000349663 DHX29Q7Z478 1369 aaKnown RBP29.87■■■□□ 2.37
KDM5C-201ENST00000349663 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
KDM5C-201ENST00000349663 TIAM1Q13009 1591 aa29.83■■■□□ 2.37
KDM5C-201ENST00000349663 KIF3BO15066 747 aa29.82■■■□□ 2.36
KDM5C-201ENST00000349663 FBXO31Q5XUX0 539 aaPredicted RBP29.8■■■□□ 2.36
KDM5C-201ENST00000349663 CEP162Q5TB80 1403 aa29.79■■■□□ 2.36
KDM5C-201ENST00000349663 EHBP1L1Q8N3D4 1523 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms