RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 B4GALNT3Q6L9W6 998 aa25.65■■□□□ 1.7
SCARF1-202ENST00000348987 KDM6BO15054 1643 aa25.64■■□□□ 1.7
SCARF1-202ENST00000348987 FOXD1Q16676 465 aa25.63■■□□□ 1.69
SCARF1-202ENST00000348987 NOP58Q9Y2X3 529 aaKnown RBP25.63■■□□□ 1.69
SCARF1-202ENST00000348987 EIF4G3O43432 1585 aaKnown RBP25.63■■□□□ 1.69
SCARF1-202ENST00000348987 TCOF1Q13428 1488 aaKnown RBP25.62■■□□□ 1.69
SCARF1-202ENST00000348987 HECW1Q76N89 1606 aa25.61■■□□□ 1.69
SCARF1-202ENST00000348987 PAK3O75914 559 aaPredicted RBP25.6■■□□□ 1.69
SCARF1-202ENST00000348987 ANO8Q9HCE9 1232 aaPredicted RBP25.6■■□□□ 1.69
SCARF1-202ENST00000348987 CHMP7Q8WUX9 453 aaPredicted RBP25.58■■□□□ 1.69
SCARF1-202ENST00000348987 MPHOSPH9Q99550 1183 aa25.56■■□□□ 1.68
SCARF1-202ENST00000348987 ZNF644Q9H582 1327 aaPredicted RBP25.55■■□□□ 1.68
SCARF1-202ENST00000348987 HSPA5P11021 654 aaKnown RBP25.54■■□□□ 1.68
SCARF1-202ENST00000348987 GRIN2AQ12879 1464 aa25.54■■□□□ 1.68
SCARF1-202ENST00000348987 WASHC2AQ641Q2 1341 aa25.53■■□□□ 1.68
SCARF1-202ENST00000348987 DISP1Q96F81 1524 aa25.52■■□□□ 1.68
SCARF1-202ENST00000348987 MIA2Q96PC5 1412 aa25.51■■□□□ 1.67
SCARF1-202ENST00000348987 KIAA0586Q9BVV6 1533 aa25.51■■□□□ 1.67
SCARF1-202ENST00000348987 CCDC184Q52MB2 194 aa25.5■■□□□ 1.67
SCARF1-202ENST00000348987 L3MBTL2Q969R5 705 aa25.5■■□□□ 1.67
SCARF1-202ENST00000348987 GCC2Q8IWJ2 1684 aa25.5■■□□□ 1.67
SCARF1-202ENST00000348987 AKNAQ7Z591 1439 aa25.48■■□□□ 1.67
SCARF1-202ENST00000348987 KIAA0556O60303 1618 aa25.45■■□□□ 1.66
SCARF1-202ENST00000348987 FAM9BQ8IZU0 186 aa25.43■■□□□ 1.66
SCARF1-202ENST00000348987 C11orf95C9JLR9 678 aaPredicted RBP25.42■■□□□ 1.66
SCARF1-202ENST00000348987 NUP153P49790 1475 aaKnown RBP25.42■■□□□ 1.66
SCARF1-202ENST00000348987 DAPK1P53355 1430 aa25.42■■□□□ 1.66
SCARF1-202ENST00000348987 EIF4G2P78344 907 aaKnown RBP eCLIP25.42■■□□□ 1.66
SCARF1-202ENST00000348987 ABCC5O15440 1437 aa25.41■■□□□ 1.66
SCARF1-202ENST00000348987 SALL2Q9Y467 1007 aaPredicted RBP25.41■■□□□ 1.66
SCARF1-202ENST00000348987 CEP170Q5SW79 1584 aa25.4■■□□□ 1.66
SCARF1-202ENST00000348987 PLB1Q6P1J6 1458 aa25.38■■□□□ 1.65
SCARF1-202ENST00000348987 MAGI1Q96QZ7 1491 aaPredicted RBP25.38■■□□□ 1.65
SCARF1-202ENST00000348987 NBPF8Q3BBV2 869 aa25.38■■□□□ 1.65
SCARF1-202ENST00000348987 SYNJ2O15056 1496 aa25.38■■□□□ 1.65
SCARF1-202ENST00000348987 JPH4Q96JJ6 628 aa25.37■■□□□ 1.65
SCARF1-202ENST00000348987 ANKRD30BQ9BXX2 1392 aa25.37■■□□□ 1.65
SCARF1-202ENST00000348987 RTL5Q5HYW3 569 aaPredicted RBP25.36■■□□□ 1.65
SCARF1-202ENST00000348987 PRG4Q92954 1404 aaPredicted RBP25.36■■□□□ 1.65
SCARF1-202ENST00000348987 SLC4A1APQ9BWU0 796 aaKnown RBP25.34■■□□□ 1.65
SCARF1-202ENST00000348987 ZNF777Q9ULD5 760 aaPredicted RBP25.34■■□□□ 1.65
SCARF1-202ENST00000348987 IPO9Q96P70 1041 aaKnown RBP25.34■■□□□ 1.65
SCARF1-202ENST00000348987 ZBED9Q6R2W3 1325 aa25.33■■□□□ 1.65
SCARF1-202ENST00000348987 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
SCARF1-202ENST00000348987 ANP32AP39687 249 aaKnown RBP25.33■■□□□ 1.64
SCARF1-202ENST00000348987 IL27Q8NEV9 243 aa25.32■■□□□ 1.64
SCARF1-202ENST00000348987 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
SCARF1-202ENST00000348987 RAPGEF6Q8TEU7 1601 aa25.31■■□□□ 1.64
SCARF1-202ENST00000348987 ZBTB47Q9UFB7 747 aaPredicted RBP25.3■■□□□ 1.64
SCARF1-202ENST00000348987 RPRD2Q5VT52 1461 aaKnown RBP25.29■■□□□ 1.64
SCARF1-202ENST00000348987 DNMT1P26358 1616 aaKnown RBP25.29■■□□□ 1.64
SCARF1-202ENST00000348987 PRKRIP1Q9H875 184 aaPredicted RBP25.29■■□□□ 1.64
SCARF1-202ENST00000348987 CFDP1Q9UEE9 299 aaPredicted RBP25.27■■□□□ 1.64
SCARF1-202ENST00000348987 TEX14Q8IWB6 1497 aa25.26■■□□□ 1.63
SCARF1-202ENST00000348987 RTN4Q9NQC3 1192 aaKnown RBP25.26■■□□□ 1.63
SCARF1-202ENST00000348987 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
SCARF1-202ENST00000348987 CCDC7Q96M83 1385 aa25.25■■□□□ 1.63
SCARF1-202ENST00000348987 NCOA1Q15788 1441 aa25.25■■□□□ 1.63
SCARF1-202ENST00000348987 CCDC136Q96JN2 1154 aa25.23■■□□□ 1.63
SCARF1-202ENST00000348987 NUP160Q12769 1436 aa25.22■■□□□ 1.63
SCARF1-202ENST00000348987 TROQ12816 1431 aaPredicted RBP25.21■■□□□ 1.63
SCARF1-202ENST00000348987 CAMSAP2Q08AD1 1489 aa25.2■■□□□ 1.62
SCARF1-202ENST00000348987 PZPP20742 1482 aa25.19■■□□□ 1.62
SCARF1-202ENST00000348987 KIF7Q2M1P5 1343 aa25.18■■□□□ 1.62
SCARF1-202ENST00000348987 GPATCH8Q9UKJ3 1502 aaKnown RBP25.18■■□□□ 1.62
SCARF1-202ENST00000348987 CARMIL2Q6F5E8 1435 aa25.18■■□□□ 1.62
SCARF1-202ENST00000348987 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
SCARF1-202ENST00000348987 KIF14Q15058 1648 aa25.16■■□□□ 1.62
SCARF1-202ENST00000348987 ZNF326Q5BKZ1 582 aaKnown RBP25.14■■□□□ 1.62
SCARF1-202ENST00000348987 CNGB1Q14028 1251 aaPredicted RBP25.12■■□□□ 1.61
SCARF1-202ENST00000348987 PKD2Q13563 968 aa25.12■■□□□ 1.61
SCARF1-202ENST00000348987 PLEKHD1A6NEE1 506 aa25.09■■□□□ 1.61
SCARF1-202ENST00000348987 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
SCARF1-202ENST00000348987 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.09■■□□□ 1.61
SCARF1-202ENST00000348987 NPM2Q86SE8 214 aaKnown RBP25.07■■□□□ 1.6
SCARF1-202ENST00000348987 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
SCARF1-202ENST00000348987 POLR3GLQ9BT43 218 aa25.05■■□□□ 1.6
SCARF1-202ENST00000348987 RNF123Q5XPI4 1314 aa25.05■■□□□ 1.6
SCARF1-202ENST00000348987 KIAA1107Q9UPP5 1409 aa25.05■■□□□ 1.6
SCARF1-202ENST00000348987 ATP10BO94823 1461 aa25.04■■□□□ 1.6
SCARF1-202ENST00000348987 LAS1LQ9Y4W2 734 aaKnown RBP25.04■■□□□ 1.6
SCARF1-202ENST00000348987 SENP3-EIF4A1A0A087X0R7 540 aa25.04■■□□□ 1.6
SCARF1-202ENST00000348987 NEFMP07197 916 aa25.03■■□□□ 1.6
SCARF1-202ENST00000348987 ANKRD30AQ9BXX3 1397 aa25.02■■□□□ 1.6
SCARF1-202ENST00000348987 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
SCARF1-202ENST00000348987 ADGRL2O95490 1459 aa25.01■■□□□ 1.6
SCARF1-202ENST00000348987 ITSN2Q9NZM3 1697 aa25■■□□□ 1.59
SCARF1-202ENST00000348987 MBD5Q9P267 1494 aa25■■□□□ 1.59
SCARF1-202ENST00000348987 HNRNPMP52272 730 aaKnown RBP eCLIP24.99■■□□□ 1.59
SCARF1-202ENST00000348987 USP47Q96K76 1375 aa24.99■■□□□ 1.59
SCARF1-202ENST00000348987 ABCA8O94911 1581 aa24.98■■□□□ 1.59
SCARF1-202ENST00000348987 PTPRGP23470 1445 aa24.98■■□□□ 1.59
SCARF1-202ENST00000348987 NUP155O75694 1391 aa24.97■■□□□ 1.59
SCARF1-202ENST00000348987 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
SCARF1-202ENST00000348987 ADGBQ8N7X0 1667 aa24.96■■□□□ 1.59
SCARF1-202ENST00000348987 DHX29Q7Z478 1369 aaKnown RBP24.95■■□□□ 1.58
SCARF1-202ENST00000348987 CHD1O14646 1710 aa24.95■■□□□ 1.58
SCARF1-202ENST00000348987 CROCC2H7BZ55 1655 aa24.94■■□□□ 1.58
SCARF1-202ENST00000348987 BCORL1Q5H9F3 1711 aa24.94■■□□□ 1.58
SCARF1-202ENST00000348987 USP35Q9P2H5 1018 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms