RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 MROH2BQ7Z745 1585 aa19.89■□□□□ 0.77
PTPRO-202ENST00000348962 SPAG9O60271 1321 aaKnown RBP19.89■□□□□ 0.77
PTPRO-202ENST00000348962 NBR1Q14596 966 aa19.89■□□□□ 0.77
PTPRO-202ENST00000348962 SETD5Q9C0A6 1442 aa19.89■□□□□ 0.77
PTPRO-202ENST00000348962 VPS8Q8N3P4 1428 aa19.88■□□□□ 0.77
PTPRO-202ENST00000348962 KCNJ4P48050 445 aa19.87■□□□□ 0.77
PTPRO-202ENST00000348962 WASHC2CQ9Y4E1 1318 aa19.87■□□□□ 0.77
PTPRO-202ENST00000348962 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
PTPRO-202ENST00000348962 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
PTPRO-202ENST00000348962 CALD1Q05682 793 aaKnown RBP19.82■□□□□ 0.76
PTPRO-202ENST00000348962 HNRNPMP52272 730 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTPRO-202ENST00000348962 MPHOSPH9Q99550 1183 aa19.81■□□□□ 0.76
PTPRO-202ENST00000348962 CCDC9Q9Y3X0 531 aaKnown RBP19.81■□□□□ 0.76
PTPRO-202ENST00000348962 RGS3P49796 1198 aa19.81■□□□□ 0.76
PTPRO-202ENST00000348962 KANK4Q5T7N3 995 aaPredicted RBP19.8■□□□□ 0.76
PTPRO-202ENST00000348962 FOXD1Q16676 465 aa19.79■□□□□ 0.76
PTPRO-202ENST00000348962 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
PTPRO-202ENST00000348962 TERF2IPQ9NYB0 399 aa19.79■□□□□ 0.76
PTPRO-202ENST00000348962 CYB5RLQ6IPT4 315 aa19.78■□□□□ 0.76
PTPRO-202ENST00000348962 ROCK2O75116 1388 aaKnown RBP19.78■□□□□ 0.76
PTPRO-202ENST00000348962 EIF3AQ14152 1382 aaKnown RBP19.78■□□□□ 0.76
PTPRO-202ENST00000348962 NGDNQ8NEJ9 315 aaKnown RBP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 TULP1O00294 542 aaPredicted RBP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 HSPA5P11021 654 aaKnown RBP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 KTN1Q86UP2 1357 aaKnown RBP19.77■□□□□ 0.76
PTPRO-202ENST00000348962 IPO8O15397 1037 aaKnown RBP19.76■□□□□ 0.75
PTPRO-202ENST00000348962 NAP1L2Q9ULW6 460 aaPredicted RBP19.75■□□□□ 0.75
PTPRO-202ENST00000348962 RAPGEF2Q9Y4G8 1499 aa19.75■□□□□ 0.75
PTPRO-202ENST00000348962 ZNF330Q9Y3S2 320 aaPredicted RBP19.75■□□□□ 0.75
PTPRO-202ENST00000348962 TMX4Q9H1E5 349 aaPredicted RBP19.74■□□□□ 0.75
PTPRO-202ENST00000348962 PPP4R2Q9NY27 417 aa19.74■□□□□ 0.75
PTPRO-202ENST00000348962 TRIM44Q96DX7 344 aaPredicted RBP19.74■□□□□ 0.75
PTPRO-202ENST00000348962 TAOK2Q9UL54 1235 aa19.74■□□□□ 0.75
PTPRO-202ENST00000348962 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
PTPRO-202ENST00000348962 ABCC8Q09428 1581 aa19.73■□□□□ 0.75
PTPRO-202ENST00000348962 CFAP44Q96MT7 982 aa19.71■□□□□ 0.75
PTPRO-202ENST00000348962 PTPRGP23470 1445 aa19.7■□□□□ 0.74
PTPRO-202ENST00000348962 TPRNQ4KMQ1 711 aa19.68■□□□□ 0.74
PTPRO-202ENST00000348962 PTMAP06454 111 aaKnown RBP19.68■□□□□ 0.74
PTPRO-202ENST00000348962 MCCP23508 829 aa19.68■□□□□ 0.74
PTPRO-202ENST00000348962 RALBP1Q15311 655 aa19.67■□□□□ 0.74
PTPRO-202ENST00000348962 HDAC5Q9UQL6 1122 aa19.67■□□□□ 0.74
PTPRO-202ENST00000348962 FHOD3Q2V2M9 1422 aa19.67■□□□□ 0.74
PTPRO-202ENST00000348962 ISY1Q9ULR0 285 aaKnown RBP19.67■□□□□ 0.74
PTPRO-202ENST00000348962 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
PTPRO-202ENST00000348962 ATAD2BQ9ULI0 1458 aa19.66■□□□□ 0.74
PTPRO-202ENST00000348962 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
PTPRO-202ENST00000348962 NUTM2DQ5VT03 806 aaPredicted RBP19.66■□□□□ 0.74
PTPRO-202ENST00000348962 CCER2I3L3R5 266 aa19.65■□□□□ 0.74
PTPRO-202ENST00000348962 HSP90AB1P08238 724 aaKnown RBP19.65■□□□□ 0.74
PTPRO-202ENST00000348962 AMPHP49418 695 aa19.65■□□□□ 0.74
PTPRO-202ENST00000348962 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
PTPRO-202ENST00000348962 GOLGA6L4A6NEF3 574 aa19.62■□□□□ 0.73
PTPRO-202ENST00000348962 FANCD2Q9BXW9 1451 aa19.61■□□□□ 0.73
PTPRO-202ENST00000348962 VGFO15240 615 aaPredicted RBP19.61■□□□□ 0.73
PTPRO-202ENST00000348962 NUTM2FA1L443 756 aa19.6■□□□□ 0.73
PTPRO-202ENST00000348962 KIAA1211Q6ZU35 1233 aa19.59■□□□□ 0.73
PTPRO-202ENST00000348962 LMOD3Q0VAK6 560 aa19.59■□□□□ 0.73
PTPRO-202ENST00000348962 TRAK1Q9UPV9 953 aa19.58■□□□□ 0.72
PTPRO-202ENST00000348962 L3MBTL2Q969R5 705 aa19.58■□□□□ 0.72
PTPRO-202ENST00000348962 GORABQ5T7V8 394 aa19.57■□□□□ 0.72
PTPRO-202ENST00000348962 TAF7LQ5H9L4 462 aa19.57■□□□□ 0.72
PTPRO-202ENST00000348962 APBB1O00213 710 aa19.56■□□□□ 0.72
PTPRO-202ENST00000348962 NRDCO43847 1150 aa19.55■□□□□ 0.72
PTPRO-202ENST00000348962 LTV1Q96GA3 475 aaPredicted RBP19.55■□□□□ 0.72
PTPRO-202ENST00000348962 HSCBQ8IWL3 235 aa19.55■□□□□ 0.72
PTPRO-202ENST00000348962 GOLGA6L6A8MZA4 724 aa19.55■□□□□ 0.72
PTPRO-202ENST00000348962 GTF2E1P29083 439 aaPredicted RBP19.54■□□□□ 0.72
PTPRO-202ENST00000348962 UACAQ9BZF9 1416 aa19.54■□□□□ 0.72
PTPRO-202ENST00000348962 PLCB2Q00722 1185 aa19.54■□□□□ 0.72
PTPRO-202ENST00000348962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.54■□□□□ 0.72
PTPRO-202ENST00000348962 GLIPR1L2Q4G1C9 344 aa19.53■□□□□ 0.72
PTPRO-202ENST00000348962 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
PTPRO-202ENST00000348962 ITPRIPQ8IWB1 547 aa19.53■□□□□ 0.72
PTPRO-202ENST00000348962 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
PTPRO-202ENST00000348962 B4GALNT3Q6L9W6 998 aa19.52■□□□□ 0.72
PTPRO-202ENST00000348962 G3V3G9 751 aa19.52■□□□□ 0.72
PTPRO-202ENST00000348962 DCAF8Q5TAQ9 597 aa19.52■□□□□ 0.72
PTPRO-202ENST00000348962 CCDC144AA2RUR9 1427 aa19.52■□□□□ 0.71
PTPRO-202ENST00000348962 FAM69CQ0P6D2 419 aa19.52■□□□□ 0.71
PTPRO-202ENST00000348962 RWDD1Q9H446 243 aaPredicted RBP19.52■□□□□ 0.71
PTPRO-202ENST00000348962 GNL2Q13823 731 aaKnown RBP19.51■□□□□ 0.71
PTPRO-202ENST00000348962 HMMRO75330 724 aa19.5■□□□□ 0.71
PTPRO-202ENST00000348962 DNTTIP2Q5QJE6 756 aaKnown RBP19.5■□□□□ 0.71
PTPRO-202ENST00000348962 NLRP13Q86W25 1043 aa19.49■□□□□ 0.71
PTPRO-202ENST00000348962 EVA1CP58658 441 aa19.48■□□□□ 0.71
PTPRO-202ENST00000348962 GPATCH3Q96I76 525 aa19.48■□□□□ 0.71
PTPRO-202ENST00000348962 SMC4Q9NTJ3 1288 aa19.48■□□□□ 0.71
PTPRO-202ENST00000348962 WIZO95785 1651 aa19.47■□□□□ 0.71
PTPRO-202ENST00000348962 RCAN3Q9UKA8 241 aa19.47■□□□□ 0.71
PTPRO-202ENST00000348962 COG3Q96JB2 828 aa19.47■□□□□ 0.71
PTPRO-202ENST00000348962 CLSTN1O94985 981 aa19.46■□□□□ 0.71
PTPRO-202ENST00000348962 EVC2Q86UK5 1308 aa19.45■□□□□ 0.7
PTPRO-202ENST00000348962 SLC4A10Q6U841 1118 aa19.44■□□□□ 0.7
PTPRO-202ENST00000348962 C1orf141Q5JVX7 400 aa19.42■□□□□ 0.7
PTPRO-202ENST00000348962 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.42■□□□□ 0.7
PTPRO-202ENST00000348962 FRAT2O75474 233 aaPredicted RBP19.41■□□□□ 0.7
PTPRO-202ENST00000348962 GAPVD1Q14C86 1478 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms