RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 NEFMP07197 916 aa17.36■□□□□ 0.37
DNMT3B-203ENST00000348286 TIAM1Q13009 1591 aa17.36■□□□□ 0.37
DNMT3B-203ENST00000348286 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.35■□□□□ 0.37
DNMT3B-203ENST00000348286 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
DNMT3B-203ENST00000348286 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
DNMT3B-203ENST00000348286 CC2D2AQ9P2K1 1620 aa17.33■□□□□ 0.37
DNMT3B-203ENST00000348286 TMF1P82094 1093 aa17.33■□□□□ 0.36
DNMT3B-203ENST00000348286 ROCK2O75116 1388 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-203ENST00000348286 FYCO1Q9BQS8 1478 aa17.31■□□□□ 0.36
DNMT3B-203ENST00000348286 WDR97A6NE52 1622 aa17.31■□□□□ 0.36
DNMT3B-203ENST00000348286 SLC24A1O60721 1099 aa17.3■□□□□ 0.36
DNMT3B-203ENST00000348286 CDCA8Q53HL2 280 aa17.29■□□□□ 0.36
DNMT3B-203ENST00000348286 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.35
DNMT3B-203ENST00000348286 KIF7Q2M1P5 1343 aa17.26■□□□□ 0.35
DNMT3B-203ENST00000348286 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
DNMT3B-203ENST00000348286 USP47Q96K76 1375 aa17.25■□□□□ 0.35
DNMT3B-203ENST00000348286 CCDC184Q52MB2 194 aa17.25■□□□□ 0.35
DNMT3B-203ENST00000348286 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
DNMT3B-203ENST00000348286 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
DNMT3B-203ENST00000348286 RGS3P49796 1198 aa17.24■□□□□ 0.35
DNMT3B-203ENST00000348286 CCDC7Q96M83 1385 aa17.23■□□□□ 0.35
DNMT3B-203ENST00000348286 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
DNMT3B-203ENST00000348286 GGT6Q6P531 493 aa17.22■□□□□ 0.35
DNMT3B-203ENST00000348286 HFM1A2PYH4 1435 aa17.22■□□□□ 0.35
DNMT3B-203ENST00000348286 RCAN3Q9UKA8 241 aa17.22■□□□□ 0.35
DNMT3B-203ENST00000348286 RALBP1Q15311 655 aa17.21■□□□□ 0.35
DNMT3B-203ENST00000348286 SAFB2Q14151 953 aaKnown RBP eCLIP17.21■□□□□ 0.35
DNMT3B-203ENST00000348286 PCF11O94913 1555 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-203ENST00000348286 NAIPQ13075 1403 aa17.2■□□□□ 0.34
DNMT3B-203ENST00000348286 LAS1LQ9Y4W2 734 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-203ENST00000348286 BIVM-ERCC5R4GMW8 1640 aa17.2■□□□□ 0.34
DNMT3B-203ENST00000348286 KIF3BO15066 747 aa17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 PTPRGP23470 1445 aa17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 ABCA10Q8WWZ4 1543 aa17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 NOP58Q9Y2X3 529 aaKnown RBP17.19■□□□□ 0.34
DNMT3B-203ENST00000348286 PPM1GO15355 546 aaPredicted RBP17.18■□□□□ 0.34
DNMT3B-203ENST00000348286 EFCAB5A4FU69 1503 aa17.18■□□□□ 0.34
DNMT3B-203ENST00000348286 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
DNMT3B-203ENST00000348286 DNMBPQ6XZF7 1577 aa17.18■□□□□ 0.34
DNMT3B-203ENST00000348286 ZBED9Q6R2W3 1325 aa17.17■□□□□ 0.34
DNMT3B-203ENST00000348286 PANK3Q9H999 370 aa17.16■□□□□ 0.34
DNMT3B-203ENST00000348286 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
DNMT3B-203ENST00000348286 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
DNMT3B-203ENST00000348286 RSPH4AQ5TD94 716 aa17.15■□□□□ 0.34
DNMT3B-203ENST00000348286 C11orf95C9JLR9 678 aaPredicted RBP17.14■□□□□ 0.33
DNMT3B-203ENST00000348286 PRDM2Q13029 1718 aa17.14■□□□□ 0.33
DNMT3B-203ENST00000348286 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
DNMT3B-203ENST00000348286 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
DNMT3B-203ENST00000348286 CFAP53Q96M91 514 aa17.13■□□□□ 0.33
DNMT3B-203ENST00000348286 ARXQ96QS3 562 aa17.13■□□□□ 0.33
DNMT3B-203ENST00000348286 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
DNMT3B-203ENST00000348286 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
DNMT3B-203ENST00000348286 CDK13Q14004 1512 aaKnown RBP17.12■□□□□ 0.33
DNMT3B-203ENST00000348286 CNTLNQ9NXG0 1405 aa17.12■□□□□ 0.33
DNMT3B-203ENST00000348286 PLIN1O60240 522 aa17.12■□□□□ 0.33
DNMT3B-203ENST00000348286 KIF15Q9NS87 1388 aa17.11■□□□□ 0.33
DNMT3B-203ENST00000348286 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
DNMT3B-203ENST00000348286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.333e-7■■■■□ 22
DNMT3B-203ENST00000348286 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
DNMT3B-203ENST00000348286 KANK1Q14678 1352 aa17.1■□□□□ 0.33
DNMT3B-203ENST00000348286 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-203ENST00000348286 NUTM2DQ5VT03 806 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-203ENST00000348286 STK26Q9P289 416 aa17.09■□□□□ 0.33
DNMT3B-203ENST00000348286 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
DNMT3B-203ENST00000348286 POGKQ9P215 609 aa17.08■□□□□ 0.32
DNMT3B-203ENST00000348286 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
DNMT3B-203ENST00000348286 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
DNMT3B-203ENST00000348286 MAP3K1Q13233 1512 aa17.07■□□□□ 0.32
DNMT3B-203ENST00000348286 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
DNMT3B-203ENST00000348286 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
DNMT3B-203ENST00000348286 HSP90AA1P07900 732 aaKnown RBP17.06■□□□□ 0.32
DNMT3B-203ENST00000348286 URB2Q14146 1524 aaKnown RBP17.06■□□□□ 0.32
DNMT3B-203ENST00000348286 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
DNMT3B-203ENST00000348286 MAPKBP1O60336 1514 aa17.05■□□□□ 0.32
DNMT3B-203ENST00000348286 MIA2Q96PC5 1412 aa17.05■□□□□ 0.32
DNMT3B-203ENST00000348286 SRPK2P78362 688 aaKnown RBP17.04■□□□□ 0.32
DNMT3B-203ENST00000348286 DDRGK1Q96HY6 314 aa17.03■□□□□ 0.32
DNMT3B-203ENST00000348286 MLECQ14165 292 aa17.03■□□□□ 0.32
DNMT3B-203ENST00000348286 FTSJ3Q8IY81 847 aaKnown RBP17.03■□□□□ 0.32
DNMT3B-203ENST00000348286 TRAK1Q9UPV9 953 aa17.03■□□□□ 0.32
DNMT3B-203ENST00000348286 PLEKHG5O94827 1062 aa17.02■□□□□ 0.32
DNMT3B-203ENST00000348286 DAPK1P53355 1430 aa17.01■□□□□ 0.31
DNMT3B-203ENST00000348286 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
DNMT3B-203ENST00000348286 GOLGA2Q08379 1002 aa17■□□□□ 0.31
DNMT3B-203ENST00000348286 AFAP1Q8N556 730 aa17■□□□□ 0.31
DNMT3B-203ENST00000348286 MAPK8IP3Q9UPT6 1336 aa17■□□□□ 0.31
DNMT3B-203ENST00000348286 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
DNMT3B-203ENST00000348286 TROQ12816 1431 aaPredicted RBP16.99■□□□□ 0.31
DNMT3B-203ENST00000348286 RRP1P56182 461 aaKnown RBP16.99■□□□□ 0.31
DNMT3B-203ENST00000348286 PDE3BQ13370 1112 aa16.99■□□□□ 0.31
DNMT3B-203ENST00000348286 SUPT6HQ7KZ85 1726 aaKnown RBP16.98■□□□□ 0.31
DNMT3B-203ENST00000348286 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
DNMT3B-203ENST00000348286 U2AF1L5P0DN76 240 aaPredicted RBP16.98■□□□□ 0.31
DNMT3B-203ENST00000348286 U2AF1Q01081 240 aaKnown RBP eCLIP16.98■□□□□ 0.316e-10■■■■□ 19.3
DNMT3B-203ENST00000348286 CDCA7LQ96GN5 454 aa16.97■□□□□ 0.31
DNMT3B-203ENST00000348286 TCERG1O14776 1098 aaKnown RBP16.97■□□□□ 0.31
DNMT3B-203ENST00000348286 ANKRD30BQ9BXX2 1392 aa16.96■□□□□ 0.31
DNMT3B-203ENST00000348286 RRP7AQ9Y3A4 280 aaKnown RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms