RNA–Protein interactions for RNA: ENST00000347486.8

SUPT6H-202, Transcript of SPT6 homolog, histone chaperone, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT6H, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-202ENST00000347486 NRDCO43847 1150 aa12.03□□□□□ -0.48
SUPT6H-202ENST00000347486 MCCP23508 829 aa12.02□□□□□ -0.48
SUPT6H-202ENST00000347486 CARMIL1Q5VZK9 1371 aa12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 ISY1Q9ULR0 285 aaKnown RBP12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 MROH2BQ7Z745 1585 aa12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 APBB1O00213 710 aa12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 HDGFL2Q7Z4V5 671 aaPredicted RBP12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 SPRYD3Q8NCJ5 442 aa12.01□□□□□ -0.49
SUPT6H-202ENST00000347486 RTN4Q9NQC3 1192 aaKnown RBP12□□□□□ -0.49
SUPT6H-202ENST00000347486 PKD2Q13563 968 aa12□□□□□ -0.49
SUPT6H-202ENST00000347486 HSPA5P11021 654 aaKnown RBP12□□□□□ -0.49
SUPT6H-202ENST00000347486 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
SUPT6H-202ENST00000347486 TIMELESSQ9UNS1 1208 aa11.98□□□□□ -0.49
SUPT6H-202ENST00000347486 CLSTN1O94985 981 aa11.98□□□□□ -0.49
SUPT6H-202ENST00000347486 FOXD1Q16676 465 aa11.98□□□□□ -0.49
SUPT6H-202ENST00000347486 IPO8O15397 1037 aaKnown RBP11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 CUX2O14529 1486 aa11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 CSB-PGBD3P0DP91 1061 aa11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 ZNF330Q9Y3S2 320 aaPredicted RBP11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 U2AF1L5P0DN76 240 aaPredicted RBP11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 U2AF1Q01081 240 aaKnown RBP eCLIP11.97□□□□□ -0.49
SUPT6H-202ENST00000347486 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
SUPT6H-202ENST00000347486 GNL2Q13823 731 aaKnown RBP11.96□□□□□ -0.5
SUPT6H-202ENST00000347486 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
SUPT6H-202ENST00000347486 CFAP44Q96MT7 982 aa11.95□□□□□ -0.5
SUPT6H-202ENST00000347486 CCER2I3L3R5 266 aa11.95□□□□□ -0.5
SUPT6H-202ENST00000347486 DRC7Q8IY82 874 aa11.95□□□□□ -0.5
SUPT6H-202ENST00000347486 SETD5Q9C0A6 1442 aa11.94□□□□□ -0.5
SUPT6H-202ENST00000347486 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
SUPT6H-202ENST00000347486 CHAF1AQ13111 956 aaPredicted RBP11.93□□□□□ -0.5
SUPT6H-202ENST00000347486 CALD1Q05682 793 aaKnown RBP11.93□□□□□ -0.5
SUPT6H-202ENST00000347486 ITPRIPQ8IWB1 547 aa11.93□□□□□ -0.5
SUPT6H-202ENST00000347486 PDS5BQ9NTI5 1447 aa11.92□□□□□ -0.5
SUPT6H-202ENST00000347486 CCDC88BA6NC98 1476 aa11.91□□□□□ -0.5
SUPT6H-202ENST00000347486 ROCK2O75116 1388 aaKnown RBP11.91□□□□□ -0.5
SUPT6H-202ENST00000347486 ARHGAP35Q9NRY4 1499 aa11.91□□□□□ -0.5
SUPT6H-202ENST00000347486 RWDD1Q9H446 243 aaPredicted RBP11.91□□□□□ -0.5
SUPT6H-202ENST00000347486 SOGA1O94964 1423 aa11.91□□□□□ -0.5
SUPT6H-202ENST00000347486 MSNP26038 577 aaKnown RBP11.9□□□□□ -0.5
SUPT6H-202ENST00000347486 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
SUPT6H-202ENST00000347486 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
SUPT6H-202ENST00000347486 RCAN3Q9UKA8 241 aa11.9□□□□□ -0.5
SUPT6H-202ENST00000347486 NUP155O75694 1391 aa11.9□□□□□ -0.5
SUPT6H-202ENST00000347486 MPHOSPH9Q99550 1183 aa11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 TOP2AP11388 1531 aaKnown RBP11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 RALBP1Q15311 655 aa11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 STK31Q9BXU1 1019 aa11.89□□□□□ -0.51
SUPT6H-202ENST00000347486 GORABQ5T7V8 394 aa11.88□□□□□ -0.51
SUPT6H-202ENST00000347486 CCDC9Q9Y3X0 531 aaKnown RBP11.88□□□□□ -0.51
SUPT6H-202ENST00000347486 CHMP3Q9Y3E7 222 aa11.87□□□□□ -0.51
SUPT6H-202ENST00000347486 ATAD2BQ9ULI0 1458 aa11.87□□□□□ -0.51
SUPT6H-202ENST00000347486 KIF3BO15066 747 aa11.87□□□□□ -0.51
SUPT6H-202ENST00000347486 TMX4Q9H1E5 349 aaPredicted RBP11.86□□□□□ -0.51
SUPT6H-202ENST00000347486 SPAG9O60271 1321 aaKnown RBP11.86□□□□□ -0.51
SUPT6H-202ENST00000347486 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
SUPT6H-202ENST00000347486 NUTM2DQ5VT03 806 aaPredicted RBP11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 GBP4Q96PP9 640 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 TAF7LQ5H9L4 462 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 DNAJC5BQ9UF47 199 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 ANKRD30AQ9BXX3 1397 aa11.85□□□□□ -0.51
SUPT6H-202ENST00000347486 SLKQ9H2G2 1235 aaPredicted RBP11.84□□□□□ -0.51
SUPT6H-202ENST00000347486 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
SUPT6H-202ENST00000347486 NGDNQ8NEJ9 315 aaKnown RBP11.84□□□□□ -0.51
SUPT6H-202ENST00000347486 EIF3AQ14152 1382 aaKnown RBP11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 SLC4A10Q6U841 1118 aa11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 TRIM6-TRIM34B2RNG4 842 aa11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 HTATSF1O43719 755 aaKnown RBP11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 EID1Q9Y6B2 187 aa11.83□□□□□ -0.52
SUPT6H-202ENST00000347486 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 KIAA2012Q0VF49 1180 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 GPATCH3Q96I76 525 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 MFAP1P55081 439 aaKnown RBP11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 TDRD9Q8NDG6 1382 aaKnown RBP11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 HDAC5Q9UQL6 1122 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 HMMRO75330 724 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 DEKP35659 375 aaKnown RBP11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 CCDC146Q8IYE0 955 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 CLUAP1Q96AJ1 413 aa11.82□□□□□ -0.52
SUPT6H-202ENST00000347486 RAB3GAP2Q9H2M9 1393 aa11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 AMPHP49418 695 aa11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 TCERG1O14776 1098 aaKnown RBP11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 PTMSP20962 102 aa11.81□□□□□ -0.52
SUPT6H-202ENST00000347486 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
SUPT6H-202ENST00000347486 NUTM2FA1L443 756 aa11.8□□□□□ -0.52
SUPT6H-202ENST00000347486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.8□□□□□ -0.522e-7■□□□□ 8.3
SUPT6H-202ENST00000347486 G3V3G9 751 aa11.79□□□□□ -0.52
SUPT6H-202ENST00000347486 DCAF8Q5TAQ9 597 aa11.79□□□□□ -0.52
SUPT6H-202ENST00000347486 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
SUPT6H-202ENST00000347486 SYAP1Q96A49 352 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms