RNA–Protein interactions for RNA: ENST00000345535.8

SLX1A-202, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLX1A, Length 762 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-202ENST00000345535 EFCAB2Q5VUJ9 269 aa29.6■■■□□ 2.33
SLX1A-202ENST00000345535 YEATS2Q9ULM3 1422 aa29.57■■■□□ 2.32
SLX1A-202ENST00000345535 MYO5CQ9NQX4 1742 aa29.53■■■□□ 2.32
SLX1A-202ENST00000345535 CLIP1P30622 1438 aa29.52■■■□□ 2.32
SLX1A-202ENST00000345535 ATP10AO60312 1499 aa29.51■■■□□ 2.31
SLX1A-202ENST00000345535 ARHGAP35Q9NRY4 1499 aa29.51■■■□□ 2.31
SLX1A-202ENST00000345535 KIF14Q15058 1648 aa29.49■■■□□ 2.31
SLX1A-202ENST00000345535 MLECQ14165 292 aa29.49■■■□□ 2.31
SLX1A-202ENST00000345535 C9orf84Q5VXU9 1444 aa29.48■■■□□ 2.31
SLX1A-202ENST00000345535 TROQ12816 1431 aaPredicted RBP29.47■■■□□ 2.31
SLX1A-202ENST00000345535 FER1L4A9Z1Z3 1794 aa29.47■■■□□ 2.31
SLX1A-202ENST00000345535 PLPPR3Q6T4P5 718 aa29.47■■■□□ 2.31
SLX1A-202ENST00000345535 EHMT2Q96KQ7 1210 aa29.47■■■□□ 2.31
SLX1A-202ENST00000345535 ZNF518AQ6AHZ1 1483 aa29.47■■■□□ 2.31
SLX1A-202ENST00000345535 ARHGAP5Q13017 1502 aa29.42■■■□□ 2.3
SLX1A-202ENST00000345535 HSPA2P54652 639 aa29.42■■■□□ 2.3
SLX1A-202ENST00000345535 ARHGEF12Q9NZN5 1544 aa29.41■■■□□ 2.3
SLX1A-202ENST00000345535 SIGLEC1Q9BZZ2 1709 aa29.41■■■□□ 2.3
SLX1A-202ENST00000345535 MYT1LQ9UL68 1186 aa29.38■■■□□ 2.29
SLX1A-202ENST00000345535 CHIC1Q5VXU3 224 aa29.36■■■□□ 2.29
SLX1A-202ENST00000345535 KDM5CP41229 1560 aa29.35■■■□□ 2.29
SLX1A-202ENST00000345535 CCDC18Q5T9S5 1454 aa29.34■■■□□ 2.29
SLX1A-202ENST00000345535 AFAP1Q8N556 730 aa29.32■■■□□ 2.28
SLX1A-202ENST00000345535 PREX1Q8TCU6 1659 aa29.3■■■□□ 2.28
SLX1A-202ENST00000345535 REREQ9P2R6 1566 aa29.28■■■□□ 2.28
SLX1A-202ENST00000345535 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
SLX1A-202ENST00000345535 MLH3Q9UHC1 1453 aa29.28■■■□□ 2.28
SLX1A-202ENST00000345535 SETD1BQ9UPS6 1966 aaKnown RBP29.28■■■□□ 2.28
SLX1A-202ENST00000345535 CASKIN1Q8WXD9 1431 aa29.28■■■□□ 2.28
SLX1A-202ENST00000345535 ESF1Q9H501 851 aaKnown RBP29.26■■■□□ 2.27
SLX1A-202ENST00000345535 CERKQ8TCT0 537 aa29.25■■■□□ 2.27
SLX1A-202ENST00000345535 DIP2CQ9Y2E4 1556 aa29.24■■■□□ 2.27
SLX1A-202ENST00000345535 CDC42BPBQ9Y5S2 1711 aa29.23■■■□□ 2.27
SLX1A-202ENST00000345535 UHRF1BP1Q6BDS2 1440 aa29.23■■■□□ 2.27
SLX1A-202ENST00000345535 PREX2Q70Z35 1606 aa29.23■■■□□ 2.27
SLX1A-202ENST00000345535 LRRIQ1Q96JM4 1722 aa29.22■■■□□ 2.27
SLX1A-202ENST00000345535 CEBPAP49715 358 aaPredicted RBP29.21■■■□□ 2.27
SLX1A-202ENST00000345535 ABCC1P33527 1531 aa29.2■■■□□ 2.26
SLX1A-202ENST00000345535 AGLP35573 1532 aa29.2■■■□□ 2.26
SLX1A-202ENST00000345535 FYCO1Q9BQS8 1478 aa29.17■■■□□ 2.26
SLX1A-202ENST00000345535 ABCA6Q8N139 1617 aa29.16■■■□□ 2.26
SLX1A-202ENST00000345535 TRAPPC8Q9Y2L5 1435 aa29.15■■■□□ 2.26
SLX1A-202ENST00000345535 CNTLNQ9NXG0 1405 aa29.13■■■□□ 2.25
SLX1A-202ENST00000345535 ITSN2Q9NZM3 1697 aa29.13■■■□□ 2.25
SLX1A-202ENST00000345535 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
SLX1A-202ENST00000345535 C3P01024 1663 aa29.06■■■□□ 2.24
SLX1A-202ENST00000345535 KIDINS220Q9ULH0 1771 aa29.06■■■□□ 2.24
SLX1A-202ENST00000345535 ZNF777Q9ULD5 760 aaPredicted RBP29.05■■■□□ 2.24
SLX1A-202ENST00000345535 STRCQ7RTU9 1775 aa29.04■■■□□ 2.24
SLX1A-202ENST00000345535 PTPRTO14522 1441 aa29.03■■■□□ 2.24
SLX1A-202ENST00000345535 SPAG9O60271 1321 aaKnown RBP29.03■■■□□ 2.24
SLX1A-202ENST00000345535 PLEKHH2Q8IVE3 1493 aa29.03■■■□□ 2.24
SLX1A-202ENST00000345535 SAMD9LQ8IVG5 1584 aa29.01■■■□□ 2.24
SLX1A-202ENST00000345535 GPATCH8Q9UKJ3 1502 aaKnown RBP28.99■■■□□ 2.23
SLX1A-202ENST00000345535 KIAA1107Q9UPP5 1409 aa28.99■■■□□ 2.23
SLX1A-202ENST00000345535 NPATQ14207 1427 aa28.98■■■□□ 2.23
SLX1A-202ENST00000345535 CFDP1Q9UEE9 299 aaPredicted RBP28.98■■■□□ 2.23
SLX1A-202ENST00000345535 SYCP2Q9BX26 1530 aa28.97■■■□□ 2.23
SLX1A-202ENST00000345535 CCNB3Q8WWL7 1395 aa28.96■■■□□ 2.23
SLX1A-202ENST00000345535 MROH2AA6NES4 1674 aa28.95■■■□□ 2.22
SLX1A-202ENST00000345535 MTUS2Q5JR59 1369 aa28.93■■■□□ 2.22
SLX1A-202ENST00000345535 HNRNPMP52272 730 aaKnown RBP eCLIP28.93■■■□□ 2.22
SLX1A-202ENST00000345535 ATP7AQ04656 1500 aa28.91■■■□□ 2.22
SLX1A-202ENST00000345535 ZMYM3Q14202 1370 aa28.9■■■□□ 2.22
SLX1A-202ENST00000345535 NCOA1Q15788 1441 aa28.9■■■□□ 2.22
SLX1A-202ENST00000345535 A2MP01023 1474 aa28.87■■■□□ 2.21
SLX1A-202ENST00000345535 PPP6R1Q9UPN7 881 aa28.87■■■□□ 2.21
SLX1A-202ENST00000345535 SUPT6HQ7KZ85 1726 aaKnown RBP28.86■■■□□ 2.21
SLX1A-202ENST00000345535 IQSEC2Q5JU85 1478 aa28.85■■■□□ 2.21
SLX1A-202ENST00000345535 INO80Q9ULG1 1556 aaPredicted RBP28.85■■■□□ 2.21
SLX1A-202ENST00000345535 PLXNC1O60486 1568 aa28.84■■■□□ 2.21
SLX1A-202ENST00000345535 CAMSAP1Q5T5Y3 1602 aa28.8■■■□□ 2.2
SLX1A-202ENST00000345535 GGT6Q6P531 493 aa28.79■■■□□ 2.2
SLX1A-202ENST00000345535 EHBP1L1Q8N3D4 1523 aa28.78■■■□□ 2.2
SLX1A-202ENST00000345535 ADGBQ8N7X0 1667 aa28.77■■■□□ 2.2
SLX1A-202ENST00000345535 PKD2Q13563 968 aa28.77■■■□□ 2.2
SLX1A-202ENST00000345535 CLTCQ00610 1675 aaKnown RBP28.77■■■□□ 2.2
SLX1A-202ENST00000345535 LTBP4Q8N2S1 1624 aa28.76■■■□□ 2.2
SLX1A-202ENST00000345535 DISP3Q9P2K9 1392 aa28.75■■■□□ 2.19
SLX1A-202ENST00000345535 PLA2R1Q13018 1463 aa28.75■■■□□ 2.19
SLX1A-202ENST00000345535 RTEL1-TNFRSF6BF6WH68 1400 aa28.75■■■□□ 2.19
SLX1A-202ENST00000345535 PTPRKQ15262 1439 aa28.73■■■□□ 2.19
SLX1A-202ENST00000345535 CEP162Q5TB80 1403 aa28.73■■■□□ 2.19
SLX1A-202ENST00000345535 ZNF142P52746 1687 aaPredicted RBP28.73■■■□□ 2.19
SLX1A-202ENST00000345535 TIAM1Q13009 1591 aa28.71■■■□□ 2.19
SLX1A-202ENST00000345535 MYO3AQ8NEV4 1616 aa28.71■■■□□ 2.19
SLX1A-202ENST00000345535 CEP170BQ9Y4F5 1589 aaPredicted RBP28.7■■■□□ 2.18
SLX1A-202ENST00000345535 RSPH4AQ5TD94 716 aa28.69■■■□□ 2.18
SLX1A-202ENST00000345535 NCKAP5LQ9HCH0 1330 aa28.69■■■□□ 2.18
SLX1A-202ENST00000345535 MBD5Q9P267 1494 aa28.68■■■□□ 2.18
SLX1A-202ENST00000345535 ZNF644Q9H582 1327 aaPredicted RBP28.67■■■□□ 2.18
SLX1A-202ENST00000345535 DHX29Q7Z478 1369 aaKnown RBP28.66■■■□□ 2.18
SLX1A-202ENST00000345535 TCOF1Q13428 1488 aaKnown RBP28.64■■■□□ 2.17
SLX1A-202ENST00000345535 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.17
SLX1A-202ENST00000345535 CCDC141Q6ZP82 1450 aa28.62■■■□□ 2.17
SLX1A-202ENST00000345535 A2ML1A8K2U0 1454 aa28.61■■■□□ 2.17
SLX1A-202ENST00000345535 ZNF335Q9H4Z2 1342 aaPredicted RBP28.6■■■□□ 2.17
SLX1A-202ENST00000345535 KIF3BO15066 747 aa28.58■■■□□ 2.17
SLX1A-202ENST00000345535 SPATA31D1Q6ZQQ2 1576 aa28.57■■■□□ 2.16
SLX1A-202ENST00000345535 UBAP1LF5GYI3 381 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms