RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 EHBP1L1Q8N3D4 1523 aa31.88■■■□□ 2.69
CLTA-202ENST00000345519 ARHGAP5Q13017 1502 aa31.86■■■□□ 2.69
CLTA-202ENST00000345519 TIAM1Q13009 1591 aa31.85■■■□□ 2.69
CLTA-202ENST00000345519 POGZQ7Z3K3 1410 aa31.84■■■□□ 2.69
CLTA-202ENST00000345519 ITSN2Q9NZM3 1697 aa31.84■■■□□ 2.69
CLTA-202ENST00000345519 ABCC1P33527 1531 aa31.83■■■□□ 2.69
CLTA-202ENST00000345519 KDM5CP41229 1560 aa31.82■■■□□ 2.68
CLTA-202ENST00000345519 RAPGEF3O95398 923 aa31.8■■■□□ 2.68
CLTA-202ENST00000345519 MAGI2Q86UL8 1455 aa31.79■■■□□ 2.68
CLTA-202ENST00000345519 KDM4FA0A1W2PPD8 638 aa31.78■■■□□ 2.68
CLTA-202ENST00000345519 MAP3K1Q13233 1512 aa31.78■■■□□ 2.68
CLTA-202ENST00000345519 SCAPERQ9BY12 1400 aa31.76■■■□□ 2.68
CLTA-202ENST00000345519 EFCAB2Q5VUJ9 269 aa31.76■■■□□ 2.67
CLTA-202ENST00000345519 GPATCH8Q9UKJ3 1502 aaKnown RBP31.75■■■□□ 2.67
CLTA-202ENST00000345519 SUPT6HQ7KZ85 1726 aaKnown RBP31.75■■■□□ 2.67
CLTA-202ENST00000345519 SAMD9LQ8IVG5 1584 aa31.75■■■□□ 2.67
CLTA-202ENST00000345519 ZNF518AQ6AHZ1 1483 aa31.73■■■□□ 2.67
CLTA-202ENST00000345519 SIGLEC1Q9BZZ2 1709 aa31.73■■■□□ 2.67
CLTA-202ENST00000345519 ZFYVE16Q7Z3T8 1539 aa31.73■■■□□ 2.67
CLTA-202ENST00000345519 MTUS2Q5JR59 1369 aa31.71■■■□□ 2.67
CLTA-202ENST00000345519 BCORL1Q5H9F3 1711 aa31.71■■■□□ 2.67
CLTA-202ENST00000345519 ADAMTSL3P82987 1691 aa31.7■■■□□ 2.67
CLTA-202ENST00000345519 HECW2Q9P2P5 1572 aa31.69■■■□□ 2.66
CLTA-202ENST00000345519 ARHGEF12Q9NZN5 1544 aa31.68■■■□□ 2.66
CLTA-202ENST00000345519 YEATS2Q9ULM3 1422 aa31.63■■■□□ 2.65
CLTA-202ENST00000345519 AEBP2Q6ZN18 517 aaPredicted RBP31.62■■■□□ 2.65
CLTA-202ENST00000345519 LRRC9Q6ZRR7 1453 aa31.62■■■□□ 2.65
CLTA-202ENST00000345519 REREQ9P2R6 1566 aa31.62■■■□□ 2.65
CLTA-202ENST00000345519 KIDINS220Q9ULH0 1771 aa31.61■■■□□ 2.65
CLTA-202ENST00000345519 SYCP2Q9BX26 1530 aa31.6■■■□□ 2.65
CLTA-202ENST00000345519 MLH3Q9UHC1 1453 aa31.6■■■□□ 2.65
CLTA-202ENST00000345519 ABCA6Q8N139 1617 aa31.6■■■□□ 2.65
CLTA-202ENST00000345519 DIP2CQ9Y2E4 1556 aa31.6■■■□□ 2.65
CLTA-202ENST00000345519 NCOA2Q15596 1464 aa31.59■■■□□ 2.65
CLTA-202ENST00000345519 PLEKHH2Q8IVE3 1493 aa31.58■■■□□ 2.65
CLTA-202ENST00000345519 KIAA1107Q9UPP5 1409 aa31.58■■■□□ 2.65
CLTA-202ENST00000345519 CCNB3Q8WWL7 1395 aa31.57■■■□□ 2.64
CLTA-202ENST00000345519 TRAPPC8Q9Y2L5 1435 aa31.56■■■□□ 2.64
CLTA-202ENST00000345519 INO80Q9ULG1 1556 aaPredicted RBP31.54■■■□□ 2.64
CLTA-202ENST00000345519 MADDQ8WXG6 1647 aa31.52■■■□□ 2.64
CLTA-202ENST00000345519 ATP10AO60312 1499 aa31.52■■■□□ 2.64
CLTA-202ENST00000345519 C9orf84Q5VXU9 1444 aa31.51■■■□□ 2.64
CLTA-202ENST00000345519 AFAP1Q8N556 730 aa31.47■■■□□ 2.63
CLTA-202ENST00000345519 FER1L4A9Z1Z3 1794 aa31.45■■■□□ 2.63
CLTA-202ENST00000345519 CFDP1Q9UEE9 299 aaPredicted RBP31.45■■■□□ 2.63
CLTA-202ENST00000345519 MBD5Q9P267 1494 aa31.45■■■□□ 2.62
CLTA-202ENST00000345519 AGLP35573 1532 aa31.42■■■□□ 2.62
CLTA-202ENST00000345519 ATP7AQ04656 1500 aa31.42■■■□□ 2.62
CLTA-202ENST00000345519 RIMS1Q86UR5 1692 aaKnown RBP31.41■■■□□ 2.62
CLTA-202ENST00000345519 CAMSAP2Q08AD1 1489 aa31.4■■■□□ 2.62
CLTA-202ENST00000345519 ARHGEF5Q12774 1597 aa31.39■■■□□ 2.62
CLTA-202ENST00000345519 ADGBQ8N7X0 1667 aa31.39■■■□□ 2.62
CLTA-202ENST00000345519 PLXNC1O60486 1568 aa31.39■■■□□ 2.61
CLTA-202ENST00000345519 PTPRMP28827 1452 aa31.37■■■□□ 2.61
CLTA-202ENST00000345519 KANK4Q5T7N3 995 aaPredicted RBP31.36■■■□□ 2.61
CLTA-202ENST00000345519 ZNF777Q9ULD5 760 aaPredicted RBP31.33■■■□□ 2.61
CLTA-202ENST00000345519 MYOM3Q5VTT5 1437 aa31.32■■■□□ 2.6
CLTA-202ENST00000345519 MIA2Q96PC5 1412 aa31.32■■■□□ 2.6
CLTA-202ENST00000345519 CCDC141Q6ZP82 1450 aa31.3■■■□□ 2.6
CLTA-202ENST00000345519 HNRNPMP52272 730 aaKnown RBP eCLIP31.3■■■□□ 2.6
CLTA-202ENST00000345519 ZNF644Q9H582 1327 aaPredicted RBP31.29■■■□□ 2.6
CLTA-202ENST00000345519 RTEL1-TNFRSF6BF6WH68 1400 aa31.28■■■□□ 2.6
CLTA-202ENST00000345519 ARID4BQ4LE39 1312 aaPredicted RBP31.27■■■□□ 2.6
CLTA-202ENST00000345519 MAST1Q9Y2H9 1570 aa31.26■■■□□ 2.6
CLTA-202ENST00000345519 CROCC2H7BZ55 1655 aa31.25■■■□□ 2.59
CLTA-202ENST00000345519 SPAG9O60271 1321 aaKnown RBP31.24■■■□□ 2.59
CLTA-202ENST00000345519 PTPN23Q9H3S7 1636 aa31.2■■■□□ 2.59
CLTA-202ENST00000345519 MROH2AA6NES4 1674 aa31.19■■■□□ 2.58
CLTA-202ENST00000345519 A2MP01023 1474 aa31.19■■■□□ 2.58
CLTA-202ENST00000345519 RSPH4AQ5TD94 716 aa31.17■■■□□ 2.58
CLTA-202ENST00000345519 C3P01024 1663 aa31.16■■■□□ 2.58
CLTA-202ENST00000345519 APLP2Q06481 763 aa31.16■■■□□ 2.58
CLTA-202ENST00000345519 TCOF1Q13428 1488 aaKnown RBP31.15■■■□□ 2.58
CLTA-202ENST00000345519 DNMT1P26358 1616 aaKnown RBP31.12■■■□□ 2.57
CLTA-202ENST00000345519 FGD6Q6ZV73 1430 aa31.11■■■□□ 2.57
CLTA-202ENST00000345519 MYT1LQ9UL68 1186 aa31.11■■■□□ 2.57
CLTA-202ENST00000345519 PREX1Q8TCU6 1659 aa31.09■■■□□ 2.57
CLTA-202ENST00000345519 SHANK2Q9UPX8 1470 aa31.08■■■□□ 2.57
CLTA-202ENST00000345519 EIF2AK4Q9P2K8 1649 aaKnown RBP31.06■■■□□ 2.56
CLTA-202ENST00000345519 SETD1BQ9UPS6 1966 aaKnown RBP31.06■■■□□ 2.56
CLTA-202ENST00000345519 LMTK3Q96Q04 1460 aa31.05■■■□□ 2.56
CLTA-202ENST00000345519 FAM135AQ9P2D6 1515 aa31.04■■■□□ 2.56
CLTA-202ENST00000345519 CLTCQ00610 1675 aaKnown RBP31.04■■■□□ 2.56
CLTA-202ENST00000345519 MLECQ14165 292 aa31.04■■■□□ 2.56
CLTA-202ENST00000345519 CNTLNQ9NXG0 1405 aa31.04■■■□□ 2.56
CLTA-202ENST00000345519 DHX29Q7Z478 1369 aaKnown RBP31.03■■■□□ 2.56
CLTA-202ENST00000345519 RNF17Q9BXT8 1623 aaKnown RBP31.02■■■□□ 2.56
CLTA-202ENST00000345519 ABCC5O15440 1437 aa30.97■■■□□ 2.55
CLTA-202ENST00000345519 DAPK1P53355 1430 aa30.95■■■□□ 2.54
CLTA-202ENST00000345519 TSPY4P0CV99 314 aa30.93■■■□□ 2.54
CLTA-202ENST00000345519 TSPY10P0CW01 314 aa30.93■■■□□ 2.54
CLTA-202ENST00000345519 ZC3H13Q5T200 1668 aaKnown RBP30.93■■■□□ 2.54
CLTA-202ENST00000345519 DUOX2Q9NRD8 1548 aa30.92■■■□□ 2.54
CLTA-202ENST00000345519 MROH1Q8NDA8 1641 aa30.91■■■□□ 2.54
CLTA-202ENST00000345519 PPP6R1Q9UPN7 881 aa30.89■■■□□ 2.54
CLTA-202ENST00000345519 KDM5DQ9BY66 1539 aa30.88■■■□□ 2.53
CLTA-202ENST00000345519 DEPDC5O75140 1603 aa30.87■■■□□ 2.53
CLTA-202ENST00000345519 NPATQ14207 1427 aa30.86■■■□□ 2.53
CLTA-202ENST00000345519 ADGRL2O95490 1459 aa30.86■■■□□ 2.53
CLTA-202ENST00000345519 ZNF142P52746 1687 aaPredicted RBP30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms