RNA–Protein interactions for RNA: ENST00000344951.8

CUL3-202, Transcript of cullin 3, humanhuman

TSL 2 BASIC

Gene CUL3, Length 6,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-202ENST00000344951 MSNP26038 577 aaKnown RBP19.19■□□□□ 0.66
CUL3-202ENST00000344951 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
CUL3-202ENST00000344951 CHMP3Q9Y3E7 222 aa19.16■□□□□ 0.66
CUL3-202ENST00000344951 GZF1Q9H116 711 aaPredicted RBP19.16■□□□□ 0.66
CUL3-202ENST00000344951 VPS53Q5VIR6 699 aa19.15■□□□□ 0.66
CUL3-202ENST00000344951 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
CUL3-202ENST00000344951 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
CUL3-202ENST00000344951 G3V3G9 751 aa19.13■□□□□ 0.65
CUL3-202ENST00000344951 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
CUL3-202ENST00000344951 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
CUL3-202ENST00000344951 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
CUL3-202ENST00000344951 KRI1Q8N9T8 703 aaKnown RBP19.12■□□□□ 0.65
CUL3-202ENST00000344951 STK26Q9P289 416 aa19.12■□□□□ 0.65
CUL3-202ENST00000344951 WRNQ14191 1432 aaPredicted RBP eCLIP19.12■□□□□ 0.65
CUL3-202ENST00000344951 SRPK2P78362 688 aaKnown RBP19.12■□□□□ 0.65
CUL3-202ENST00000344951 CCER2I3L3R5 266 aa19.11■□□□□ 0.65
CUL3-202ENST00000344951 MCCP23508 829 aa19.1■□□□□ 0.65
CUL3-202ENST00000344951 NOL8Q76FK4 1167 aaKnown RBP19.1■□□□□ 0.65
CUL3-202ENST00000344951 TMX4Q9H1E5 349 aaPredicted RBP19.09■□□□□ 0.65
CUL3-202ENST00000344951 PLEKHD1A6NEE1 506 aa19.08■□□□□ 0.65
CUL3-202ENST00000344951 L1TD1Q5T7N2 865 aaKnown RBP19.08■□□□□ 0.64
CUL3-202ENST00000344951 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.64
CUL3-202ENST00000344951 CFDP1Q9UEE9 299 aaPredicted RBP19.07■□□□□ 0.64
CUL3-202ENST00000344951 RASSF8Q8NHQ8 419 aa19.06■□□□□ 0.64
CUL3-202ENST00000344951 PATL2C9JE40 543 aaKnown RBP19.06■□□□□ 0.64
CUL3-202ENST00000344951 FOXD4L1Q9NU39 408 aa19.05■□□□□ 0.64
CUL3-202ENST00000344951 CCNB3Q8WWL7 1395 aa19.05■□□□□ 0.64
CUL3-202ENST00000344951 GORABQ5T7V8 394 aa19.03■□□□□ 0.64
CUL3-202ENST00000344951 HSPA5P11021 654 aaKnown RBP19.03■□□□□ 0.64
CUL3-202ENST00000344951 KIAA1211Q6ZU35 1233 aa19.03■□□□□ 0.64
CUL3-202ENST00000344951 TAF7LQ5H9L4 462 aa19.01■□□□□ 0.63
CUL3-202ENST00000344951 FOXD4L5Q5VV16 416 aaPredicted RBP19.01■□□□□ 0.63
CUL3-202ENST00000344951 FOXD4L4Q8WXT5 416 aaPredicted RBP19.01■□□□□ 0.63
CUL3-202ENST00000344951 TNNT3P45378 269 aaPredicted RBP19■□□□□ 0.63
CUL3-202ENST00000344951 TOMM22Q9NS69 142 aa18.99■□□□□ 0.63
CUL3-202ENST00000344951 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
CUL3-202ENST00000344951 RAD21O60216 631 aa18.97■□□□□ 0.63
CUL3-202ENST00000344951 PES1O00541 588 aaKnown RBP18.97■□□□□ 0.63
CUL3-202ENST00000344951 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
CUL3-202ENST00000344951 SLKQ9H2G2 1235 aaPredicted RBP18.96■□□□□ 0.63
CUL3-202ENST00000344951 MORC1Q86VD1 984 aa18.96■□□□□ 0.63
CUL3-202ENST00000344951 MARCH6O60337 910 aa18.96■□□□□ 0.62
CUL3-202ENST00000344951 MS4A1P11836 297 aa18.95■□□□□ 0.62
CUL3-202ENST00000344951 FRAT2O75474 233 aaPredicted RBP18.95■□□□□ 0.62
CUL3-202ENST00000344951 TRIM6-TRIM34B2RNG4 842 aa18.94■□□□□ 0.62
CUL3-202ENST00000344951 MSH5O43196 834 aa18.94■□□□□ 0.62
CUL3-202ENST00000344951 CHMP4BQ9H444 224 aaKnown RBP18.94■□□□□ 0.62
CUL3-202ENST00000344951 ITPRIPQ8IWB1 547 aa18.93■□□□□ 0.62
CUL3-202ENST00000344951 TMF1P82094 1093 aa18.93■□□□□ 0.62
CUL3-202ENST00000344951 SETD5Q9C0A6 1442 aa18.93■□□□□ 0.62
CUL3-202ENST00000344951 SOGA1O94964 1423 aa18.92■□□□□ 0.62
CUL3-202ENST00000344951 CEP89Q96ST8 783 aa18.92■□□□□ 0.62
CUL3-202ENST00000344951 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
CUL3-202ENST00000344951 RCAN3Q9UKA8 241 aa18.9■□□□□ 0.62
CUL3-202ENST00000344951 IPO9Q96P70 1041 aaKnown RBP18.9■□□□□ 0.62
CUL3-202ENST00000344951 RB1CC1Q8TDY2 1594 aa18.9■□□□□ 0.62
CUL3-202ENST00000344951 TIMELESSQ9UNS1 1208 aa18.9■□□□□ 0.62
CUL3-202ENST00000344951 FOXD1Q16676 465 aa18.89■□□□□ 0.61
CUL3-202ENST00000344951 SLC4A10Q6U841 1118 aa18.89■□□□□ 0.61
CUL3-202ENST00000344951 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.88■□□□□ 0.61
CUL3-202ENST00000344951 LTV1Q96GA3 475 aaPredicted RBP18.88■□□□□ 0.61
CUL3-202ENST00000344951 GOLGA6L1Q8N7Z2 621 aa18.88■□□□□ 0.61
CUL3-202ENST00000344951 TCERG1O14776 1098 aaKnown RBP18.88■□□□□ 0.61
CUL3-202ENST00000344951 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
CUL3-202ENST00000344951 KLHL34Q8N239 644 aa18.87■□□□□ 0.61
CUL3-202ENST00000344951 NUTM2FA1L443 756 aa18.87■□□□□ 0.61
CUL3-202ENST00000344951 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
CUL3-202ENST00000344951 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
CUL3-202ENST00000344951 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
CUL3-202ENST00000344951 TPM4P67936 248 aa18.86■□□□□ 0.61
CUL3-202ENST00000344951 GTF2E1P29083 439 aaPredicted RBP18.86■□□□□ 0.61
CUL3-202ENST00000344951 KANK4Q5T7N3 995 aaPredicted RBP18.85■□□□□ 0.61
CUL3-202ENST00000344951 GGT6Q6P531 493 aa18.85■□□□□ 0.61
CUL3-202ENST00000344951 SAMD1Q6SPF0 538 aaPredicted RBP18.84■□□□□ 0.61
CUL3-202ENST00000344951 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
CUL3-202ENST00000344951 CCAR2Q8N163 923 aaKnown RBP18.84■□□□□ 0.61
CUL3-202ENST00000344951 BAZ1BQ9UIG0 1483 aaKnown RBP18.83■□□□□ 0.6
CUL3-202ENST00000344951 FBXW7Q969H0 707 aa18.82■□□□□ 0.6
CUL3-202ENST00000344951 GBP4Q96PP9 640 aa18.81■□□□□ 0.6
CUL3-202ENST00000344951 RAB3GAP2Q9H2M9 1393 aa18.81■□□□□ 0.6
CUL3-202ENST00000344951 GOLGA6L3A6NEY3 463 aa18.8■□□□□ 0.6
CUL3-202ENST00000344951 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
CUL3-202ENST00000344951 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
CUL3-202ENST00000344951 FHAD1B1AJZ9 1412 aa18.79■□□□□ 0.6
CUL3-202ENST00000344951 VPS8Q8N3P4 1428 aa18.79■□□□□ 0.6
CUL3-202ENST00000344951 TPD52L1Q16890 204 aaPredicted RBP18.78■□□□□ 0.6
CUL3-202ENST00000344951 NGEFQ8N5V2 710 aa18.77■□□□□ 0.6
CUL3-202ENST00000344951 ARHGAP35Q9NRY4 1499 aa18.77■□□□□ 0.6
CUL3-202ENST00000344951 HDGFL2Q7Z4V5 671 aaPredicted RBP18.76■□□□□ 0.59
CUL3-202ENST00000344951 BCL11BQ9C0K0 894 aaPredicted RBP18.76■□□□□ 0.59
CUL3-202ENST00000344951 TPM3P06753 285 aa18.75■□□□□ 0.59
CUL3-202ENST00000344951 TCEAL9Q9UHQ7 104 aa18.75■□□□□ 0.59
CUL3-202ENST00000344951 HTATSF1O43719 755 aaKnown RBP18.75■□□□□ 0.59
CUL3-202ENST00000344951 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
CUL3-202ENST00000344951 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
CUL3-202ENST00000344951 CLUAP1Q96AJ1 413 aa18.74■□□□□ 0.59
CUL3-202ENST00000344951 GPATCH3Q96I76 525 aa18.74■□□□□ 0.59
CUL3-202ENST00000344951 PTMSP20962 102 aa18.73■□□□□ 0.59
CUL3-202ENST00000344951 SF3A1Q15459 793 aaKnown RBP18.73■□□□□ 0.59
CUL3-202ENST00000344951 EIF4G1Q04637 1599 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms